RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 GUCY1A2P33402 732 aa17.41■□□□□ 0.38
MCF2L-205ENST00000397017 ZSCAN30Q86W11 494 aa17.4■□□□□ 0.38
MCF2L-205ENST00000397017 ANKRD20A12PQ8NF67 263 aa17.4■□□□□ 0.38
MCF2L-205ENST00000397017 HDAC9Q9UKV0 1011 aa17.4■□□□□ 0.38
MCF2L-205ENST00000397017 MYO1BO43795 1136 aa17.4■□□□□ 0.38
MCF2L-205ENST00000397017 GDF11O95390 407 aa17.4■□□□□ 0.38
MCF2L-205ENST00000397017 CDC25AP30304 524 aa17.4■□□□□ 0.38
MCF2L-205ENST00000397017 FAM160A1Q05DH4 1040 aa17.4■□□□□ 0.38
MCF2L-205ENST00000397017 RRP36Q96EU6 259 aaKnown RBP17.4■□□□□ 0.38
MCF2L-205ENST00000397017 NPR1P16066 1061 aa17.4■□□□□ 0.38
MCF2L-205ENST00000397017 SLC16A2P36021 539 aa17.4■□□□□ 0.38
MCF2L-205ENST00000397017 VGLL2Q8N8G2 317 aa17.4■□□□□ 0.38
MCF2L-205ENST00000397017 TRMT1Q9NXH9 659 aaKnown RBP17.4■□□□□ 0.38
MCF2L-205ENST00000397017 KLRF2D3W0D1 207 aa17.39■□□□□ 0.37
MCF2L-205ENST00000397017 SEMA3EO15041 775 aa17.39■□□□□ 0.37
MCF2L-205ENST00000397017 ZNF202O95125 648 aa17.39■□□□□ 0.37
MCF2L-205ENST00000397017 GNAQP50148 359 aa17.39■□□□□ 0.37
MCF2L-205ENST00000397017 USH1GQ495M9 461 aa17.39■□□□□ 0.37
MCF2L-205ENST00000397017 ENAHQ8N8S7 591 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-205ENST00000397017 KRI1Q8N9T8 703 aaKnown RBP17.39■□□□□ 0.37
MCF2L-205ENST00000397017 LY9Q9HBG7 655 aa17.39■□□□□ 0.37
MCF2L-205ENST00000397017 ZNF445P59923 1031 aa17.39■□□□□ 0.37
MCF2L-205ENST00000397017 RESTQ13127 1097 aa17.39■□□□□ 0.37
MCF2L-205ENST00000397017 PSDA5PKW4 1024 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-205ENST00000397017 CTAGE5O15320 804 aa17.39■□□□□ 0.37
MCF2L-205ENST00000397017 NDUFA8P51970 172 aa17.39■□□□□ 0.37
MCF2L-205ENST00000397017 SMARCE1Q969G3 411 aa17.39■□□□□ 0.37
MCF2L-205ENST00000397017 EVX2Q03828 476 aa17.38■□□□□ 0.37
MCF2L-205ENST00000397017 C17orf53Q8N3J3 647 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-205ENST00000397017 CNKSR1Q969H4 720 aa17.38■□□□□ 0.37
MCF2L-205ENST00000397017 RPAP1Q9BWH6 1393 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-205ENST00000397017 TTLL12Q14166 644 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-205ENST00000397017 FCHSD1Q86WN1 690 aa17.38■□□□□ 0.37
MCF2L-205ENST00000397017 NOSTRINQ8IVI9 506 aa17.38■□□□□ 0.37
MCF2L-205ENST00000397017 MASTLQ96GX5 879 aa17.38■□□□□ 0.37
MCF2L-205ENST00000397017 ST3GAL1Q11201 340 aa17.38■□□□□ 0.37
MCF2L-205ENST00000397017 ZNF827Q17R98 1081 aa17.38■□□□□ 0.37
MCF2L-205ENST00000397017 PGBD1Q96JS3 809 aa17.38■□□□□ 0.37
MCF2L-205ENST00000397017 KCNH3Q9ULD8 1083 aa17.38■□□□□ 0.37
MCF2L-205ENST00000397017 RGPD1P0DJD0 1748 aa17.37■□□□□ 0.37
MCF2L-205ENST00000397017 SLC1A4P43007 532 aa17.37■□□□□ 0.37
MCF2L-205ENST00000397017 DDR1Q08345 913 aa17.37■□□□□ 0.37
MCF2L-205ENST00000397017 DLGAP5Q15398 846 aa17.37■□□□□ 0.37
MCF2L-205ENST00000397017 TSGA10IPQ3SY00 556 aa17.37■□□□□ 0.37
MCF2L-205ENST00000397017 WDR78Q5VTH9 848 aa17.37■□□□□ 0.37
MCF2L-205ENST00000397017 CCDC186Q7Z3E2 898 aa17.37■□□□□ 0.37
MCF2L-205ENST00000397017 FBXO33Q7Z6M2 555 aa17.37■□□□□ 0.37
MCF2L-205ENST00000397017 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-205ENST00000397017 RBM28Q9NW13 759 aaKnown RBP17.37■□□□□ 0.37
MCF2L-205ENST00000397017 POLLQ9UGP5 575 aa17.37■□□□□ 0.37
MCF2L-205ENST00000397017 CTDNEP1O95476 244 aa17.37■□□□□ 0.37
MCF2L-205ENST00000397017 KIF23Q02241 960 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-205ENST00000397017 TDRD3Q9H7E2 651 aaKnown RBP17.37■□□□□ 0.37
MCF2L-205ENST00000397017 BIN2Q9UBW5 565 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-205ENST00000397017 TSR1Q2NL82 804 aaKnown RBP17.37■□□□□ 0.37
MCF2L-205ENST00000397017 MIGA2Q7L4E1 593 aa17.37■□□□□ 0.37
MCF2L-205ENST00000397017 TCP11L1Q9NUJ3 509 aa17.37■□□□□ 0.37
MCF2L-205ENST00000397017 TPM1P09493 284 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 PDE4CQ08493 712 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 RILPL1Q5EBL4 403 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 BRIP1Q9BX63 1249 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 DDIT3P35638 169 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 PLCD1P51178 756 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 GRIK5Q16478 980 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 KCTD1Q719H9 257 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 TMC6Q7Z403 805 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 OXER1Q8TDS5 423 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 MRC1P22897 1456 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 ERCC3P19447 782 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 PTPN21Q16825 1174 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 INF2Q27J81 1249 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 CLSTN2Q9H4D0 955 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 PKD2L1Q9P0L9 805 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 MRVI1Q9Y6F6 885 aa17.36■□□□□ 0.37
MCF2L-205ENST00000397017 PFKFB1P16118 471 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 PNOCQ13519 176 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 TTC38Q5R3I4 469 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 TMX1Q9H3N1 280 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 CBX8Q9HC52 389 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 ROBO1Q9Y6N7 1651 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 CDK8P49336 464 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 SNAP25P60880 206 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 NIM1KQ8IY84 436 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 CCDC148Q8NFR7 591 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 CCDC12Q8WUD4 166 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-205ENST00000397017 STAG1Q8WVM7 1258 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 EEF2KMTQ96G04 330 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 C6orf50Q9HD87 102 aa17.35■□□□□ 0.37
MCF2L-205ENST00000397017 ZBTB12Q9Y330 459 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-205ENST00000397017 COBLO75128 1261 aa17.34■□□□□ 0.37
MCF2L-205ENST00000397017 CPXCR1Q8N123 301 aa17.34■□□□□ 0.37
MCF2L-205ENST00000397017 KIF28PB7ZC32 967 aa17.34■□□□□ 0.37
MCF2L-205ENST00000397017 CALML3P27482 149 aa17.34■□□□□ 0.37
MCF2L-205ENST00000397017 STAT6P42226 847 aa17.34■□□□□ 0.37
MCF2L-205ENST00000397017 TXKP42681 527 aa17.34■□□□□ 0.37
MCF2L-205ENST00000397017 LIFRP42702 1097 aa17.34■□□□□ 0.37
MCF2L-205ENST00000397017 GRAMD1CQ8IYS0 662 aa17.34■□□□□ 0.37
MCF2L-205ENST00000397017 TANGO6Q9C0B7 1094 aa17.34■□□□□ 0.37
MCF2L-205ENST00000397017 SERPINB13Q9UIV8 391 aa17.34■□□□□ 0.37
MCF2L-205ENST00000397017 CCNT1O60563 726 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms