RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 PRPF38BQ5VTL8 546 aaKnown RBP13.38□□□□□ -0.27
NDUFA9-202ENST00000396655 C17orf99Q6UX52 265 aa13.38□□□□□ -0.27
NDUFA9-202ENST00000396655 PARK7Q99497 189 aaKnown RBP13.38□□□□□ -0.27
NDUFA9-202ENST00000396655 BCL11AQ9H165 835 aa13.38□□□□□ -0.27
NDUFA9-202ENST00000396655 SAP30BPQ9UHR5 308 aaKnown RBP13.38□□□□□ -0.27
NDUFA9-202ENST00000396655 MYH7P12883 1935 aa13.38□□□□□ -0.27
NDUFA9-202ENST00000396655 PTPRFP10586 1907 aa13.37□□□□□ -0.27
NDUFA9-202ENST00000396655 C19orf81C9J6K1 198 aa13.37□□□□□ -0.27
NDUFA9-202ENST00000396655 GABPAQ06546 454 aa13.37□□□□□ -0.27
NDUFA9-202ENST00000396655 SPP2Q13103 211 aa13.37□□□□□ -0.27
NDUFA9-202ENST00000396655 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.27
NDUFA9-202ENST00000396655 RRP1BQ14684 758 aaKnown RBP13.37□□□□□ -0.27
NDUFA9-202ENST00000396655 OTOP1Q7RTM1 612 aa13.37□□□□□ -0.27
NDUFA9-202ENST00000396655 EFCC1Q9HA90 598 aa13.37□□□□□ -0.27
NDUFA9-202ENST00000396655 DCP1AQ9NPI6 582 aaPredicted RBP13.37□□□□□ -0.27
NDUFA9-202ENST00000396655 STAP2Q9UGK3 403 aa13.37□□□□□ -0.27
NDUFA9-202ENST00000396655 AGTPBP1Q9UPW5 1226 aa13.37□□□□□ -0.27
NDUFA9-202ENST00000396655 TRIM75PA6NK02 468 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 POLR3DP05423 398 aaPredicted RBP13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 MX1P20591 662 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 PLCD1P51178 756 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 PRMT2P55345 433 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 BACE1P56817 501 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 KIF22Q14807 665 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 ANKRD45Q5TZF3 282 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 GIMAP6Q6P9H5 292 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 SMC5Q8IY18 1101 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 LCORLQ8N3X6 602 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 PI4K2BQ8TCG2 481 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 DDRGK1Q96HY6 314 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 MCM9Q9NXL9 1143 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 SWAP70Q9UH65 585 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 ZBTB21Q9ULJ3 1066 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 SSUH2Q9Y2M2 353 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 ATAD5Q96QE3 1844 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 ADGRA2Q96PE1 1338 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 SALL3Q9BXA9 1300 aa13.36□□□□□ -0.27
NDUFA9-202ENST00000396655 RNF113AO15541 343 aaKnown RBP13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 MBD4O95243 580 aa13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 LACTBP83111 547 aaPredicted RBP13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 CERKLQ49MI3 558 aaPredicted RBP13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 AMOTL1Q8IY63 956 aa13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 CD99L2Q8TCZ2 262 aa13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 APPBP2Q92624 585 aa13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 ARMT1Q9H993 441 aa13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 HPS5Q9UPZ3 1129 aa13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 PTPN22Q9Y2R2 807 aa13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 TRIM17Q9Y577 477 aa13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 SUPT16HQ9Y5B9 1047 aaKnown RBP13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 MKI67P46013 3256 aaKnown RBP13.35□□□□□ -0.27
NDUFA9-202ENST00000396655 DDX60LQ5H9U9 1706 aaKnown RBP13.34□□□□□ -0.27
NDUFA9-202ENST00000396655 USP17L10C9JJH3 530 aa13.34□□□□□ -0.27
NDUFA9-202ENST00000396655 BCRP11274 1271 aa13.34□□□□□ -0.27
NDUFA9-202ENST00000396655 GNAT2P19087 354 aa13.34□□□□□ -0.27
NDUFA9-202ENST00000396655 HOXA7P31268 230 aaPredicted RBP13.34□□□□□ -0.27
NDUFA9-202ENST00000396655 GADL1Q6ZQY3 521 aa13.34□□□□□ -0.27
NDUFA9-202ENST00000396655 SDR42E1Q8WUS8 393 aa13.34□□□□□ -0.27
NDUFA9-202ENST00000396655 STRBPQ96SI9 672 aaKnown RBP13.34□□□□□ -0.27
NDUFA9-202ENST00000396655 PUS7LQ9H0K6 701 aaKnown RBP13.34□□□□□ -0.27
NDUFA9-202ENST00000396655 CABP5Q9NP86 173 aa13.34□□□□□ -0.27
NDUFA9-202ENST00000396655 HOXD10P28358 340 aa13.33□□□□□ -0.28
NDUFA9-202ENST00000396655 SHMT1P34896 483 aa13.33□□□□□ -0.28
NDUFA9-202ENST00000396655 GCLCP48506 637 aaPredicted RBP13.33□□□□□ -0.28
NDUFA9-202ENST00000396655 JAG1P78504 1218 aa13.33□□□□□ -0.28
NDUFA9-202ENST00000396655 ABCB5Q2M3G0 1257 aa13.33□□□□□ -0.28
NDUFA9-202ENST00000396655 C12orf60Q5U649 245 aa13.33□□□□□ -0.28
NDUFA9-202ENST00000396655 CCDC17Q96LX7 622 aa13.33□□□□□ -0.28
NDUFA9-202ENST00000396655 TMOD4Q9NZQ9 345 aa13.33□□□□□ -0.28
NDUFA9-202ENST00000396655 NAV1Q8NEY1 1877 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 GH2P01242 217 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 CYP2C8P10632 490 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 USP14P54578 494 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 PDE1AP54750 535 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 HMGCS2P54868 508 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 SBK1Q52WX2 424 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 TSHZ3Q63HK5 1081 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 EXOC6Q8TAG9 804 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 OTUD7AQ8TE49 926 aaPredicted RBP13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 SMCR8Q8TEV9 937 aaPredicted RBP13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 OSBP2Q969R2 916 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 C12orf42Q96LP6 360 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 KIAA1683Q9H0B3 1180 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 CPA4Q9UI42 421 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 SLC4A4Q9Y6R1 1079 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 LOC285556D6RIA3 1793 aa13.32□□□□□ -0.28
NDUFA9-202ENST00000396655 USP17L12C9JPN9 530 aa13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 USP17L21D6R901 530 aa13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 PRKAB2O43741 272 aa13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 GDF11O95390 407 aa13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 OSBPP22059 807 aa13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 NUCB1Q02818 461 aa13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 MTMR2Q13614 643 aa13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 SLFNL1Q499Z3 407 aa13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 TREML2Q5T2D2 321 aa13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 USP17L2Q6R6M4 530 aa13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 CCDC84Q86UT8 332 aaPredicted RBP13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 ARMC5Q96C12 935 aa13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 EVI5LQ96CN4 794 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms