RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CHAF1AQ13111 956 aaPredicted RBP19.1■□□□□ 0.65
TRIM39-205ENST00000396551 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.1■□□□□ 0.65
TRIM39-205ENST00000396551 RNF26Q9BY78 433 aaPredicted RBP19.09■□□□□ 0.65
TRIM39-205ENST00000396551 UBAP1LF5GYI3 381 aa19.09■□□□□ 0.65
TRIM39-205ENST00000396551 GRIN1Q05586 938 aa19.09■□□□□ 0.65
TRIM39-205ENST00000396551 NCAPHQ15003 741 aa19.09■□□□□ 0.65
TRIM39-205ENST00000396551 PKN1Q16512 942 aa19.09■□□□□ 0.65
TRIM39-205ENST00000396551 ISM2Q6H9L7 571 aa19.09■□□□□ 0.65
TRIM39-205ENST00000396551 USP21Q9UK80 565 aa19.09■□□□□ 0.65
TRIM39-205ENST00000396551 ZRSR1Q15695 479 aaKnown RBP19.08■□□□□ 0.65
TRIM39-205ENST00000396551 MYRIPQ8NFW9 859 aa19.08■□□□□ 0.65
TRIM39-205ENST00000396551 DCP1AQ9NPI6 582 aaPredicted RBP19.08■□□□□ 0.65
TRIM39-205ENST00000396551 JAG2Q9Y219 1238 aa19.08■□□□□ 0.65
TRIM39-205ENST00000396551 PNOCQ13519 176 aa19.08■□□□□ 0.64
TRIM39-205ENST00000396551 LONRF3Q496Y0 759 aa19.08■□□□□ 0.64
TRIM39-205ENST00000396551 IFIT1BQ5T764 474 aaKnown RBP19.08■□□□□ 0.64
TRIM39-205ENST00000396551 KRI1Q8N9T8 703 aaKnown RBP19.08■□□□□ 0.64
TRIM39-205ENST00000396551 FBXO2Q9UK22 296 aaPredicted RBP19.08■□□□□ 0.64
TRIM39-205ENST00000396551 PLEKHA8P1O95397 391 aa19.08■□□□□ 0.64
TRIM39-205ENST00000396551 RBM10P98175 930 aaKnown RBP19.08■□□□□ 0.64
TRIM39-205ENST00000396551 SPECC1Q5M775 1068 aa19.08■□□□□ 0.64
TRIM39-205ENST00000396551 METTL16Q86W50 562 aaKnown RBP19.08■□□□□ 0.64
TRIM39-205ENST00000396551 LRRC8AQ8IWT6 810 aa19.08■□□□□ 0.64
TRIM39-205ENST00000396551 PRIMPOLQ96LW4 560 aa19.08■□□□□ 0.64
TRIM39-205ENST00000396551 PCDHB6Q9Y5E3 794 aa19.08■□□□□ 0.64
TRIM39-205ENST00000396551 TROAPQ12815 778 aa19.07■□□□□ 0.64
TRIM39-205ENST00000396551 CYP2D6P10635 497 aa19.07■□□□□ 0.64
TRIM39-205ENST00000396551 PPP2R5BQ15173 497 aa19.07■□□□□ 0.64
TRIM39-205ENST00000396551 RILPL1Q5EBL4 403 aa19.07■□□□□ 0.64
TRIM39-205ENST00000396551 KCNH3Q9ULD8 1083 aa19.07■□□□□ 0.64
TRIM39-205ENST00000396551 hCG_1642624A0A1W2PR95 340 aa19.06■□□□□ 0.64
TRIM39-205ENST00000396551 PCP11498 1178 aaKnown RBP19.06■□□□□ 0.64
TRIM39-205ENST00000396551 KRBA2Q6ZNG9 492 aa19.06■□□□□ 0.64
TRIM39-205ENST00000396551 DYNC1I1O14576 645 aa19.06■□□□□ 0.64
TRIM39-205ENST00000396551 PTPREP23469 700 aa19.06■□□□□ 0.64
TRIM39-205ENST00000396551 FOXP4Q8IVH2 680 aaPredicted RBP19.06■□□□□ 0.64
TRIM39-205ENST00000396551 CRNKL1Q9BZJ0 848 aaKnown RBP19.06■□□□□ 0.64
TRIM39-205ENST00000396551 VPS54Q9P1Q0 977 aa19.06■□□□□ 0.64
TRIM39-205ENST00000396551 CATIPQ7Z7H3 387 aa19.06■□□□□ 0.64
TRIM39-205ENST00000396551 IQCA1Q86XH1 822 aa19.06■□□□□ 0.64
TRIM39-205ENST00000396551 FAM205CA6NFA0 338 aa19.05■□□□□ 0.64
TRIM39-205ENST00000396551 ORC4O43929 436 aa19.05■□□□□ 0.64
TRIM39-205ENST00000396551 NMT2O60551 498 aa19.05■□□□□ 0.64
TRIM39-205ENST00000396551 FOXN1O15353 648 aa19.05■□□□□ 0.64
TRIM39-205ENST00000396551 PRPF3O43395 683 aaKnown RBP19.05■□□□□ 0.64
TRIM39-205ENST00000396551 HSD3B7Q9H2F3 369 aa19.05■□□□□ 0.64
TRIM39-205ENST00000396551 CABP5Q9NP86 173 aa19.05■□□□□ 0.64
TRIM39-205ENST00000396551 EARS2Q5JPH6 523 aaKnown RBP19.04■□□□□ 0.64
TRIM39-205ENST00000396551 FILIP1Q7Z7B0 1213 aa19.04■□□□□ 0.64
TRIM39-205ENST00000396551 PHF20Q9BVI0 1012 aa19.04■□□□□ 0.64
TRIM39-205ENST00000396551 ATP8A2Q9NTI2 1148 aa19.04■□□□□ 0.64
TRIM39-205ENST00000396551 MDM2Q00987 491 aaPredicted RBP19.04■□□□□ 0.64
TRIM39-205ENST00000396551 FAM47AQ5JRC9 791 aa19.04■□□□□ 0.64
TRIM39-205ENST00000396551 NFIXQ14938 502 aa19.04■□□□□ 0.64
TRIM39-205ENST00000396551 CNNM3Q8NE01 707 aa19.04■□□□□ 0.64
TRIM39-205ENST00000396551 XPO4Q9C0E2 1151 aaKnown RBP19.04■□□□□ 0.64
TRIM39-205ENST00000396551 RBM28Q9NW13 759 aaKnown RBP19.04■□□□□ 0.64
TRIM39-205ENST00000396551 V9GY48 417 aaPredicted RBP19.04■□□□□ 0.64
TRIM39-205ENST00000396551 RFC4P35249 363 aa19.03■□□□□ 0.64
TRIM39-205ENST00000396551 AKAP17AQ02040 695 aaKnown RBP19.03■□□□□ 0.64
TRIM39-205ENST00000396551 IFNKQ9P0W0 207 aa19.03■□□□□ 0.64
TRIM39-205ENST00000396551 IKBKBO14920 756 aa19.03■□□□□ 0.64
TRIM39-205ENST00000396551 ZBTB22O15209 634 aa19.03■□□□□ 0.64
TRIM39-205ENST00000396551 RRP9O43818 475 aaKnown RBP19.03■□□□□ 0.64
TRIM39-205ENST00000396551 DDAH1O94760 285 aa19.03■□□□□ 0.64
TRIM39-205ENST00000396551 ATP2B1P20020 1258 aa19.03■□□□□ 0.64
TRIM39-205ENST00000396551 SBK1Q52WX2 424 aa19.03■□□□□ 0.64
TRIM39-205ENST00000396551 TMTC3Q6ZXV5 915 aa19.03■□□□□ 0.64
TRIM39-205ENST00000396551 CNTNAP5Q8WYK1 1306 aa19.03■□□□□ 0.64
TRIM39-205ENST00000396551 CCZ1BP86790 482 aa19.02■□□□□ 0.64
TRIM39-205ENST00000396551 CCZ1P86791 482 aaPredicted RBP19.02■□□□□ 0.64
TRIM39-205ENST00000396551 PCDHA5Q9Y5H7 936 aa19.02■□□□□ 0.64
TRIM39-205ENST00000396551 SMTNL1A8MU46 457 aa19.02■□□□□ 0.64
TRIM39-205ENST00000396551 GTF2F1P35269 517 aaKnown RBP eCLIP19.02■□□□□ 0.64
TRIM39-205ENST00000396551 TRAPPC3LQ5T215 181 aa19.02■□□□□ 0.64
TRIM39-205ENST00000396551 FAM196AQ6ZSG2 479 aa19.02■□□□□ 0.64
TRIM39-205ENST00000396551 ARPP21Q9UBL0 812 aaPredicted RBP19.02■□□□□ 0.64
TRIM39-205ENST00000396551 SRPRBQ9Y5M8 271 aaKnown RBP19.02■□□□□ 0.64
TRIM39-205ENST00000396551 NPHP1O15259 732 aa19.02■□□□□ 0.63
TRIM39-205ENST00000396551 CALM1P0DP23 149 aa19.02■□□□□ 0.63
TRIM39-205ENST00000396551 CALM2P0DP24 149 aa19.02■□□□□ 0.63
TRIM39-205ENST00000396551 CALM3P0DP25 149 aa19.02■□□□□ 0.63
TRIM39-205ENST00000396551 GRAPQ13588 217 aa19.02■□□□□ 0.63
TRIM39-205ENST00000396551 HSP90AA2PQ14568 343 aaPredicted RBP19.02■□□□□ 0.63
TRIM39-205ENST00000396551 NPY5RQ15761 445 aa19.02■□□□□ 0.63
TRIM39-205ENST00000396551 GRAPLQ8TC17 118 aaPredicted RBP19.02■□□□□ 0.63
TRIM39-205ENST00000396551 NEMFO60524 1076 aa19.01■□□□□ 0.63
TRIM39-205ENST00000396551 BMP6P22004 513 aa19.01■□□□□ 0.63
TRIM39-205ENST00000396551 SRBD1Q8N5C6 995 aaKnown RBP19.01■□□□□ 0.63
TRIM39-205ENST00000396551 BAZ2BQ9UIF8 2168 aaKnown RBP19.01■□□□□ 0.63
TRIM39-205ENST00000396551 WNT7AO00755 349 aa19.01■□□□□ 0.63
TRIM39-205ENST00000396551 SMC2O95347 1197 aa19.01■□□□□ 0.63
TRIM39-205ENST00000396551 USP17L8P0C7I0 530 aa19.01■□□□□ 0.63
TRIM39-205ENST00000396551 LMOD1P29536 600 aaPredicted RBP19.01■□□□□ 0.63
TRIM39-205ENST00000396551 KRT2P35908 639 aa19.01■□□□□ 0.63
TRIM39-205ENST00000396551 GRIK5Q16478 980 aa19.01■□□□□ 0.63
TRIM39-205ENST00000396551 SLC4A8Q2Y0W8 1093 aa19.01■□□□□ 0.63
TRIM39-205ENST00000396551 USP49Q70CQ1 688 aa19.01■□□□□ 0.63
TRIM39-205ENST00000396551 DZIP1Q86YF9 867 aaKnown RBP19.01■□□□□ 0.63
TRIM39-205ENST00000396551 ELOA2Q8IYF1 753 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms