RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.31■□□□□ 0.36
CBX3-202ENST00000396386 PLSCR1O15162 318 aa17.3■□□□□ 0.36
CBX3-202ENST00000396386 EVX2Q03828 476 aa17.3■□□□□ 0.36
CBX3-202ENST00000396386 SLC39A14Q15043 492 aa17.3■□□□□ 0.36
CBX3-202ENST00000396386 DIXDC1Q155Q3 683 aa17.3■□□□□ 0.36
CBX3-202ENST00000396386 FMR1NBQ8N0W7 255 aaPredicted RBP17.3■□□□□ 0.36
CBX3-202ENST00000396386 JMYQ8N9B5 988 aa17.3■□□□□ 0.36
CBX3-202ENST00000396386 TBC1D16Q8TBP0 767 aa17.3■□□□□ 0.36
CBX3-202ENST00000396386 SH3RF3Q8TEJ3 882 aaPredicted RBP17.3■□□□□ 0.36
CBX3-202ENST00000396386 AKT1S1Q96B36 256 aa17.3■□□□□ 0.36
CBX3-202ENST00000396386 CAVIN2O95810 425 aa17.29■□□□□ 0.36
CBX3-202ENST00000396386 PTMAP06454 111 aaKnown RBP17.29■□□□□ 0.36
CBX3-202ENST00000396386 MSNP26038 577 aaKnown RBP17.29■□□□□ 0.36
CBX3-202ENST00000396386 PPP4CP60510 307 aa17.29■□□□□ 0.36
CBX3-202ENST00000396386 AKAP17AQ02040 695 aaKnown RBP17.29■□□□□ 0.36
CBX3-202ENST00000396386 GRIK5Q16478 980 aa17.29■□□□□ 0.36
CBX3-202ENST00000396386 NLGN1Q8N2Q7 840 aa17.29■□□□□ 0.36
CBX3-202ENST00000396386 MKRN1Q9UHC7 482 aaKnown RBP17.29■□□□□ 0.36
CBX3-202ENST00000396386 PPP6R2O75170 966 aa17.29■□□□□ 0.36
CBX3-202ENST00000396386 ADCY5O95622 1261 aa17.29■□□□□ 0.36
CBX3-202ENST00000396386 USP17L8P0C7I0 530 aa17.29■□□□□ 0.36
CBX3-202ENST00000396386 C12orf60Q5U649 245 aa17.29■□□□□ 0.36
CBX3-202ENST00000396386 NOSTRINQ8IVI9 506 aa17.29■□□□□ 0.36
CBX3-202ENST00000396386 DIS3L2Q8IYB7 885 aaKnown RBP17.29■□□□□ 0.36
CBX3-202ENST00000396386 CMTR1Q8N1G2 835 aaKnown RBP17.29■□□□□ 0.36
CBX3-202ENST00000396386 RTFDC1Q9BY42 306 aaPredicted RBP17.29■□□□□ 0.36
CBX3-202ENST00000396386 MYH1P12882 1939 aa17.28■□□□□ 0.36
CBX3-202ENST00000396386 TSPY2A6NKD2 308 aa17.28■□□□□ 0.36
CBX3-202ENST00000396386 STX1AQ16623 288 aa17.28■□□□□ 0.36
CBX3-202ENST00000396386 SP8Q8IXZ3 490 aa17.28■□□□□ 0.36
CBX3-202ENST00000396386 CCDC82Q8N4S0 544 aa17.28■□□□□ 0.36
CBX3-202ENST00000396386 TBC1D22AQ8WUA7 517 aa17.28■□□□□ 0.36
CBX3-202ENST00000396386 FOXP1Q9H334 677 aaPredicted RBP17.28■□□□□ 0.36
CBX3-202ENST00000396386 CBX8Q9HC52 389 aa17.28■□□□□ 0.36
CBX3-202ENST00000396386 POLLQ9UGP5 575 aa17.28■□□□□ 0.36
CBX3-202ENST00000396386 NOL7Q9UMY1 257 aaKnown RBP17.28■□□□□ 0.36
CBX3-202ENST00000396386 A0A1B0GVL5 298 aa17.27■□□□□ 0.36
CBX3-202ENST00000396386 C6orf229H3BNL8 230 aa17.27■□□□□ 0.36
CBX3-202ENST00000396386 APBA3O96018 575 aa17.27■□□□□ 0.36
CBX3-202ENST00000396386 XBP1P17861 261 aa17.27■□□□□ 0.36
CBX3-202ENST00000396386 NDUFA8P51970 172 aa17.27■□□□□ 0.36
CBX3-202ENST00000396386 TROAPQ12815 778 aa17.27■□□□□ 0.36
CBX3-202ENST00000396386 PTPAQ15257 358 aa17.27■□□□□ 0.36
CBX3-202ENST00000396386 FAM47AQ5JRC9 791 aa17.27■□□□□ 0.36
CBX3-202ENST00000396386 COL23A1Q86Y22 540 aaPredicted RBP17.27■□□□□ 0.36
CBX3-202ENST00000396386 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.36
CBX3-202ENST00000396386 KCNJ14Q9UNX9 436 aa17.27■□□□□ 0.36
CBX3-202ENST00000396386 AXDND1Q5T1B0 1012 aaPredicted RBP17.27■□□□□ 0.35
CBX3-202ENST00000396386 SLF2Q8IX21 1173 aa17.27■□□□□ 0.35
CBX3-202ENST00000396386 CTCFLQ8NI51 663 aaPredicted RBP17.27■□□□□ 0.35
CBX3-202ENST00000396386 MAP3K14Q99558 947 aa17.27■□□□□ 0.35
CBX3-202ENST00000396386 ATP6V0A2Q9Y487 856 aa17.27■□□□□ 0.35
CBX3-202ENST00000396386 BTBD18B2RXH4 712 aa17.26■□□□□ 0.35
CBX3-202ENST00000396386 PRPF3O43395 683 aaKnown RBP17.26■□□□□ 0.35
CBX3-202ENST00000396386 PLEKHA8P1O95397 391 aa17.26■□□□□ 0.35
CBX3-202ENST00000396386 NPR1P16066 1061 aa17.26■□□□□ 0.35
CBX3-202ENST00000396386 PLCG2P16885 1265 aa17.26■□□□□ 0.35
CBX3-202ENST00000396386 CMA1P23946 247 aa17.26■□□□□ 0.35
CBX3-202ENST00000396386 BTDP43251 543 aa17.26■□□□□ 0.35
CBX3-202ENST00000396386 FUT2Q10981 343 aa17.26■□□□□ 0.35
CBX3-202ENST00000396386 MFSD14BQ5SR56 506 aa17.26■□□□□ 0.35
CBX3-202ENST00000396386 TMTC3Q6ZXV5 915 aa17.26■□□□□ 0.35
CBX3-202ENST00000396386 DNAJC25Q9H1X3 360 aa17.26■□□□□ 0.35
CBX3-202ENST00000396386 FAM205AQ6ZU69 1335 aa17.25■□□□□ 0.35
CBX3-202ENST00000396386 CNTNAP5Q8WYK1 1306 aa17.25■□□□□ 0.35
CBX3-202ENST00000396386 NMT2O60551 498 aa17.25■□□□□ 0.35
CBX3-202ENST00000396386 MARCKSP29966 332 aaPredicted RBP17.25■□□□□ 0.35
CBX3-202ENST00000396386 SLC4A8Q2Y0W8 1093 aa17.25■□□□□ 0.35
CBX3-202ENST00000396386 LUZP1Q86V48 1076 aa17.25■□□□□ 0.35
CBX3-202ENST00000396386 TGFBRAP1Q8WUH2 860 aa17.25■□□□□ 0.35
CBX3-202ENST00000396386 ZKSCAN5Q9Y2L8 839 aa17.25■□□□□ 0.35
CBX3-202ENST00000396386 GPR75-ASB3A0A0A6YYF3 556 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 WDHD1O75717 1129 aaPredicted RBP17.24■□□□□ 0.35
CBX3-202ENST00000396386 SRGNP10124 158 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 PFKFB1P16118 471 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 ZNF165P49910 485 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 PLCB2Q00722 1185 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 CCDC178Q5BJE1 867 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 RILPL1Q5EBL4 403 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 GAKO14976 1311 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 CUTAO60888 179 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 PDE6BP35913 854 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 MAPKAPK5Q8IW41 473 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 TEX11Q8IYF3 940 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 SDF4Q9BRK5 362 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 COA1Q9GZY4 146 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 ANO10Q9NW15 660 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 PARP3Q9Y6F1 533 aa17.24■□□□□ 0.35
CBX3-202ENST00000396386 TFAP4Q01664 338 aa17.23■□□□□ 0.35
CBX3-202ENST00000396386 PKN1Q16512 942 aa17.23■□□□□ 0.35
CBX3-202ENST00000396386 DYNLL2Q96FJ2 89 aa17.23■□□□□ 0.35
CBX3-202ENST00000396386 KAT14Q9H8E8 782 aa17.23■□□□□ 0.35
CBX3-202ENST00000396386 MKNK2Q9HBH9 465 aa17.23■□□□□ 0.35
CBX3-202ENST00000396386 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.23■□□□□ 0.35
CBX3-202ENST00000396386 AP5Z1O43299 807 aa17.22■□□□□ 0.35
CBX3-202ENST00000396386 KIF5BP33176 963 aa17.22■□□□□ 0.35
CBX3-202ENST00000396386 KRT2P35908 639 aa17.22■□□□□ 0.35
CBX3-202ENST00000396386 RCSD1Q6JBY9 416 aa17.22■□□□□ 0.35
CBX3-202ENST00000396386 SNED1Q8TER0 1413 aa17.22■□□□□ 0.35
CBX3-202ENST00000396386 FAM163AQ96GL9 167 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms