RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 PPP1R1BQ9UD71 204 aaPredicted RBP3.84□□□□□ -1.79
VPS13C-203ENST00000395896 AFF2P51816 1311 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 PEAK1Q9H792 1746 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 RASGRF1Q13972 1273 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 MARCH10Q8NA82 808 aaPredicted RBP3.84□□□□□ -1.79
VPS13C-203ENST00000395896 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.84□□□□□ -1.79
VPS13C-203ENST00000395896 TNKSO95271 1327 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 ANO1Q5XXA6 986 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 GINM1Q9NU53 330 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 LRRC24Q50LG9 513 aa3.84□□□□□ -1.8
VPS13C-203ENST00000395896 DPY19L2Q6NUT2 758 aa3.84□□□□□ -1.8
VPS13C-203ENST00000395896 GSDMAQ96QA5 445 aa3.84□□□□□ -1.8
VPS13C-203ENST00000395896 AATFQ9NY61 560 aaKnown RBP eCLIP3.84□□□□□ -1.8
VPS13C-203ENST00000395896 TTF2Q9UNY4 1162 aaKnown RBP3.84□□□□□ -1.8
VPS13C-203ENST00000395896 KDM3AQ9Y4C1 1321 aa3.84□□□□□ -1.8
VPS13C-203ENST00000395896 PHKA1P46020 1223 aa3.84□□□□□ -1.8
VPS13C-203ENST00000395896 CNGA4Q8IV77 575 aa3.84□□□□□ -1.8
VPS13C-203ENST00000395896 RTN4Q9NQC3 1192 aaKnown RBP3.84□□□□□ -1.8
VPS13C-203ENST00000395896 POTEJP0CG39 1038 aa3.84□□□□□ -1.8
VPS13C-203ENST00000395896 PDIA3P30101 505 aaKnown RBP3.84□□□□□ -1.8
VPS13C-203ENST00000395896 DIS3L2Q8IYB7 885 aaKnown RBP3.84□□□□□ -1.8
VPS13C-203ENST00000395896 IL17RAQ96F46 866 aa3.84□□□□□ -1.8
VPS13C-203ENST00000395896 CDHR1Q96JP9 859 aa3.84□□□□□ -1.8
VPS13C-203ENST00000395896 FOXO4P98177 505 aa3.84□□□□□ -1.8
VPS13C-203ENST00000395896 SYNPO2Q9UMS6 1093 aa3.84□□□□□ -1.8
VPS13C-203ENST00000395896 TRPM3Q9HCF6 1732 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-203ENST00000395896 ROBO1Q9Y6N7 1651 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 H7C1D1 291 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 PPP6R2O75170 966 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 ZNF579Q8NAF0 562 aaKnown RBP3.83□□□□□ -1.8
VPS13C-203ENST00000395896 LEO1Q8WVC0 666 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-203ENST00000395896 GBP3Q9H0R5 595 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 SH3GLB2Q9NR46 395 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 TMOD4Q9NZQ9 345 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 MCAMP43121 646 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 PPP2R3AQ06190 1150 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 PABPC4Q13310 644 aaKnown RBP eCLIP3.83□□□□□ -1.8
VPS13C-203ENST00000395896 DLGAP5Q15398 846 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 STRIP1Q5VSL9 837 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 RRAGBQ5VZM2 374 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 CNNM4Q6P4Q7 775 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 MIGA1Q8NAN2 632 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 AS3MTQ9HBK9 375 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 IFI16Q16666 785 aaKnown RBP3.83□□□□□ -1.8
VPS13C-203ENST00000395896 SLFN12Q8IYM2 578 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 RTEL1Q9NZ71 1219 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 KCNH3Q9ULD8 1083 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 CAMTA2O94983 1202 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 ODF2Q5BJF6 829 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 TTLL6Q8N841 843 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 GOPCQ9HD26 462 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 LRP6O75581 1613 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 USO1O60763 962 aaKnown RBP3.83□□□□□ -1.8
VPS13C-203ENST00000395896 LONP1P36776 959 aaKnown RBP3.83□□□□□ -1.8
VPS13C-203ENST00000395896 EVCP57679 992 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 MYL5Q02045 173 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 SEPT2Q15019 361 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 HLFQ16534 295 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 KIAA1468Q9P260 1216 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 AHDC1Q5TGY3 1603 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-203ENST00000395896 B4E1Z4 1266 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 CMA1P23946 247 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 HOXA10P31260 410 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-203ENST00000395896 CETN2P41208 172 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 TFAP4Q01664 338 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 APOBRQ0VD83 1088 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 SLC39A14Q15043 492 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 CCDC82Q8N4S0 544 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 AMNQ9BXJ7 453 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 DEF6Q9H4E7 631 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 ARFGEF2Q9Y6D5 1785 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 TYRO3Q06418 890 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 PTPN14Q15678 1187 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 CCDC93Q567U6 631 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 SUSD4Q5VX71 490 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 NHSL1Q5SYE7 1610 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 KIF4AO95239 1232 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 NOC3LQ8WTT2 800 aaKnown RBP3.83□□□□□ -1.8
VPS13C-203ENST00000395896 KLRF2D3W0D1 207 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 GNA14O95837 355 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 SCG2P13521 617 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 ERCC5P28715 1186 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-203ENST00000395896 CLCN1P35523 988 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 PRPHP41219 470 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 SMARCC2Q8TAQ2 1214 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 MRIQ9BWK5 157 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 NAA15Q9BXJ9 866 aaKnown RBP3.83□□□□□ -1.8
VPS13C-203ENST00000395896 EXOC1Q9NV70 894 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 ZNF609O15014 1411 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 USP17L3A6NCW0 530 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 USP17L4A6NCW7 530 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 KIF5CO60282 957 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 ERLIN1O75477 346 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 CLSTN1O94985 981 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 MMP10P09238 476 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 PPP1R18Q6NYC8 613 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 USP17L1Q7RTZ2 530 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 CCDC65Q8IXS2 484 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 KCNB2Q92953 911 aa3.83□□□□□ -1.8
VPS13C-203ENST00000395896 ZKSCAN5Q9Y2L8 839 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms