RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 FAM110CQ1W6H9 321 aa21.94■■□□□ 1.1
CXCL12-204ENST00000395793 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.94■■□□□ 1.1
CXCL12-204ENST00000395793 BCL11AQ9H165 835 aa21.94■■□□□ 1.1
CXCL12-204ENST00000395793 PNMA3Q9UL41 463 aa21.94■■□□□ 1.1
CXCL12-204ENST00000395793 MYH7P12883 1935 aa21.94■■□□□ 1.1
CXCL12-204ENST00000395793 PDE6AP16499 860 aa21.93■■□□□ 1.1
CXCL12-204ENST00000395793 USP5P45974 858 aa21.93■■□□□ 1.1
CXCL12-204ENST00000395793 FLT3LGP49771 235 aa21.93■■□□□ 1.1
CXCL12-204ENST00000395793 BACE1P56817 501 aa21.93■■□□□ 1.1
CXCL12-204ENST00000395793 EVX2Q03828 476 aa21.93■■□□□ 1.1
CXCL12-204ENST00000395793 DNAJC2Q99543 621 aaKnown RBP21.93■■□□□ 1.1
CXCL12-204ENST00000395793 TRIM34Q9BYJ4 488 aa21.93■■□□□ 1.1
CXCL12-204ENST00000395793 GOLIM4O00461 696 aa21.92■■□□□ 1.1
CXCL12-204ENST00000395793 TNPO2O14787 897 aaKnown RBP21.92■■□□□ 1.1
CXCL12-204ENST00000395793 RAB11FIP3O75154 756 aa21.92■■□□□ 1.1
CXCL12-204ENST00000395793 CCL5P13501 91 aa21.92■■□□□ 1.1
CXCL12-204ENST00000395793 CERS3Q8IU89 383 aa21.92■■□□□ 1.1
CXCL12-204ENST00000395793 TCRBV5S4A2TA0A5A2 114 aa21.91■■□□□ 1.1
CXCL12-204ENST00000395793 PEX10O60683 326 aa21.91■■□□□ 1.1
CXCL12-204ENST00000395793 IFIT2P09913 472 aaKnown RBP21.91■■□□□ 1.1
CXCL12-204ENST00000395793 ELNP15502 786 aa21.91■■□□□ 1.1
CXCL12-204ENST00000395793 TTF1Q15361 905 aaPredicted RBP21.91■■□□□ 1.1
CXCL12-204ENST00000395793 TATDN1Q6P1N9 297 aa21.91■■□□□ 1.1
CXCL12-204ENST00000395793 TMED8Q6PL24 325 aaPredicted RBP21.91■■□□□ 1.1
CXCL12-204ENST00000395793 SLAIN1Q8ND83 568 aa21.91■■□□□ 1.1
CXCL12-204ENST00000395793 EHD4Q9H223 541 aa21.91■■□□□ 1.1
CXCL12-204ENST00000395793 GINM1Q9NU53 330 aa21.91■■□□□ 1.1
CXCL12-204ENST00000395793 ZNF532Q9HCE3 1301 aa21.9■■□□□ 1.1
CXCL12-204ENST00000395793 ADCY3O60266 1144 aa21.9■■□□□ 1.1
CXCL12-204ENST00000395793 GH2P01242 217 aa21.9■■□□□ 1.1
CXCL12-204ENST00000395793 GCLCP48506 637 aaPredicted RBP21.9■■□□□ 1.1
CXCL12-204ENST00000395793 PLCD1P51178 756 aa21.9■■□□□ 1.1
CXCL12-204ENST00000395793 PABPC4Q13310 644 aaKnown RBP eCLIP21.9■■□□□ 1.1
CXCL12-204ENST00000395793 PDE3AQ14432 1141 aa21.9■■□□□ 1.1
CXCL12-204ENST00000395793 SLFNL1Q499Z3 407 aa21.9■■□□□ 1.1
CXCL12-204ENST00000395793 SLC9C2Q5TAH2 1124 aa21.9■■□□□ 1.1
CXCL12-204ENST00000395793 SERPINB13Q9UIV8 391 aa21.9■■□□□ 1.1
CXCL12-204ENST00000395793 BAZ2AQ9UIF9 1905 aaKnown RBP21.89■■□□□ 1.09
CXCL12-204ENST00000395793 MAGEB6P1A0A0J9YX57 407 aa21.89■■□□□ 1.09
CXCL12-204ENST00000395793 HOXA7P31268 230 aaPredicted RBP21.89■■□□□ 1.09
CXCL12-204ENST00000395793 IRF5Q13568 498 aa21.89■■□□□ 1.09
CXCL12-204ENST00000395793 LCORLQ8N3X6 602 aa21.89■■□□□ 1.09
CXCL12-204ENST00000395793 P2RX7Q99572 595 aaKnown RBP21.89■■□□□ 1.09
CXCL12-204ENST00000395793 UNC93B1Q9H1C4 597 aa21.89■■□□□ 1.09
CXCL12-204ENST00000395793 EMILIN3Q9NT22 766 aa21.89■■□□□ 1.09
CXCL12-204ENST00000395793 TMOD4Q9NZQ9 345 aa21.89■■□□□ 1.09
CXCL12-204ENST00000395793 MORF4L1Q9UBU8 362 aa21.89■■□□□ 1.09
CXCL12-204ENST00000395793 BIN2Q9UBW5 565 aaPredicted RBP21.89■■□□□ 1.09
CXCL12-204ENST00000395793 C19orf81C9J6K1 198 aa21.88■■□□□ 1.09
CXCL12-204ENST00000395793 USP17L10C9JJH3 530 aa21.88■■□□□ 1.09
CXCL12-204ENST00000395793 CHGBP05060 677 aa21.88■■□□□ 1.09
CXCL12-204ENST00000395793 SHMT1P34896 483 aa21.88■■□□□ 1.09
CXCL12-204ENST00000395793 POTEEQ6S8J3 1075 aa21.88■■□□□ 1.09
CXCL12-204ENST00000395793 BOLA2Q9H3K6 86 aa21.88■■□□□ 1.09
CXCL12-204ENST00000395793 TXNRD2Q9NNW7 524 aa21.88■■□□□ 1.09
CXCL12-204ENST00000395793 MYH8P13535 1937 aa21.88■■□□□ 1.09
CXCL12-204ENST00000395793 INHAP05111 366 aa21.87■■□□□ 1.09
CXCL12-204ENST00000395793 GJB1P08034 283 aa21.87■■□□□ 1.09
CXCL12-204ENST00000395793 GJA8P48165 433 aa21.87■■□□□ 1.09
CXCL12-204ENST00000395793 UBXN2AP68543 259 aa21.87■■□□□ 1.09
CXCL12-204ENST00000395793 IRX3P78415 501 aaPredicted RBP21.87■■□□□ 1.09
CXCL12-204ENST00000395793 TTC6Q86TZ1 520 aa21.87■■□□□ 1.09
CXCL12-204ENST00000395793 PXYLP1Q8TE99 480 aa21.87■■□□□ 1.09
CXCL12-204ENST00000395793 SDR42E1Q8WUS8 393 aa21.87■■□□□ 1.09
CXCL12-204ENST00000395793 RNF208Q9H0X6 261 aa21.87■■□□□ 1.09
CXCL12-204ENST00000395793 CHMP4BQ9H444 224 aaKnown RBP21.87■■□□□ 1.09
CXCL12-204ENST00000395793 PAG1Q9NWQ8 432 aa21.87■■□□□ 1.09
CXCL12-204ENST00000395793 SMARCA5O60264 1052 aaPredicted RBP21.86■■□□□ 1.09
CXCL12-204ENST00000395793 ATP5JP18859 108 aa21.86■■□□□ 1.09
CXCL12-204ENST00000395793 GABPAQ06546 454 aa21.86■■□□□ 1.09
CXCL12-204ENST00000395793 UBE2Q1Q7Z7E8 422 aa21.86■■□□□ 1.09
CXCL12-204ENST00000395793 COA7Q96BR5 231 aa21.86■■□□□ 1.09
CXCL12-204ENST00000395793 CRNKL1Q9BZJ0 848 aaKnown RBP21.86■■□□□ 1.09
CXCL12-204ENST00000395793 GJD2Q9UKL4 321 aa21.86■■□□□ 1.09
CXCL12-204ENST00000395793 GUCY1A2P33402 732 aa21.85■■□□□ 1.09
CXCL12-204ENST00000395793 ADD2P35612 726 aa21.85■■□□□ 1.09
CXCL12-204ENST00000395793 HERVK_113P62684 666 aa21.85■■□□□ 1.09
CXCL12-204ENST00000395793 HAUS7Q99871 368 aa21.85■■□□□ 1.09
CXCL12-204ENST00000395793 ARMT1Q9H993 441 aa21.85■■□□□ 1.09
CXCL12-204ENST00000395793 TAOK2Q9UL54 1235 aa21.85■■□□□ 1.09
CXCL12-204ENST00000395793 CEP290O15078 2479 aa21.84■■□□□ 1.09
CXCL12-204ENST00000395793 CYP2D6P10635 497 aa21.84■■□□□ 1.09
CXCL12-204ENST00000395793 ZYXQ15942 572 aaKnown RBP21.84■■□□□ 1.09
CXCL12-204ENST00000395793 ABCB5Q2M3G0 1257 aa21.84■■□□□ 1.09
CXCL12-204ENST00000395793 CERKLQ49MI3 558 aaPredicted RBP21.84■■□□□ 1.09
CXCL12-204ENST00000395793 USP17L2Q6R6M4 530 aa21.84■■□□□ 1.09
CXCL12-204ENST00000395793 ACER1Q8TDN7 264 aa21.84■■□□□ 1.09
CXCL12-204ENST00000395793 U2AF1L4Q8WU68 220 aaKnown RBP21.84■■□□□ 1.09
CXCL12-204ENST00000395793 C12orf42Q96LP6 360 aa21.84■■□□□ 1.09
CXCL12-204ENST00000395793 LRRCC1Q9C099 1032 aa21.84■■□□□ 1.09
CXCL12-204ENST00000395793 DCP1AQ9NPI6 582 aaPredicted RBP21.84■■□□□ 1.09
CXCL12-204ENST00000395793 MCM9Q9NXL9 1143 aa21.84■■□□□ 1.09
CXCL12-204ENST00000395793 RBPJLQ9UBG7 517 aa21.84■■□□□ 1.09
CXCL12-204ENST00000395793 PRKAB2O43741 272 aa21.83■■□□□ 1.09
CXCL12-204ENST00000395793 POLR3DP05423 398 aaPredicted RBP21.83■■□□□ 1.09
CXCL12-204ENST00000395793 RAB3GAP1Q15042 981 aa21.83■■□□□ 1.09
CXCL12-204ENST00000395793 SMIM22K7EJ46 135 aa21.82■■□□□ 1.08
CXCL12-204ENST00000395793 MBD4O95243 580 aa21.82■■□□□ 1.08
CXCL12-204ENST00000395793 Q3C1V9 767 aa21.82■■□□□ 1.08
CXCL12-204ENST00000395793 SLC44A5Q8NCS7 719 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms