RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 MKNK2Q9HBH9 465 aa20.63■□□□□ 0.89
SREBF1-204ENST00000395756 VEGFAP15692 232 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-204ENST00000395756 TFAP4Q01664 338 aa20.62■□□□□ 0.89
SREBF1-204ENST00000395756 DDR1Q08345 913 aa20.62■□□□□ 0.89
SREBF1-204ENST00000395756 PTPAQ15257 358 aa20.62■□□□□ 0.89
SREBF1-204ENST00000395756 ZNF804AQ7Z570 1209 aa20.62■□□□□ 0.89
SREBF1-204ENST00000395756 PLCD3Q8N3E9 789 aa20.62■□□□□ 0.89
SREBF1-204ENST00000395756 ANO10Q9NW15 660 aa20.62■□□□□ 0.89
SREBF1-204ENST00000395756 KIAA1468Q9P260 1216 aa20.62■□□□□ 0.89
SREBF1-204ENST00000395756 SHISA4Q96DD7 197 aa20.62■□□□□ 0.89
SREBF1-204ENST00000395756 CMA1P23946 247 aa20.62■□□□□ 0.89
SREBF1-204ENST00000395756 IQCB1Q15051 598 aa20.62■□□□□ 0.89
SREBF1-204ENST00000395756 NOM1Q5C9Z4 860 aaKnown RBP20.62■□□□□ 0.89
SREBF1-204ENST00000395756 SPTY2D1Q68D10 685 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-204ENST00000395756 LEMD3Q9Y2U8 911 aa20.62■□□□□ 0.89
SREBF1-204ENST00000395756 USP17L3A6NCW0 530 aa20.61■□□□□ 0.89
SREBF1-204ENST00000395756 USP17L4A6NCW7 530 aa20.61■□□□□ 0.89
SREBF1-204ENST00000395756 ZNF500O60304 480 aaPredicted RBP20.61■□□□□ 0.89
SREBF1-204ENST00000395756 ONECUT3O60422 494 aaPredicted RBP20.61■□□□□ 0.89
SREBF1-204ENST00000395756 PDE4BQ07343 736 aa20.61■□□□□ 0.89
SREBF1-204ENST00000395756 TROAPQ12815 778 aa20.61■□□□□ 0.89
SREBF1-204ENST00000395756 LRMPQ12912 555 aa20.61■□□□□ 0.89
SREBF1-204ENST00000395756 USP17L1Q7RTZ2 530 aa20.61■□□□□ 0.89
SREBF1-204ENST00000395756 PROM2Q8N271 834 aa20.61■□□□□ 0.89
SREBF1-204ENST00000395756 WDR66Q8TBY9 1149 aa20.61■□□□□ 0.89
SREBF1-204ENST00000395756 ATP8A2Q9NTI2 1148 aa20.61■□□□□ 0.89
SREBF1-204ENST00000395756 GGA1Q9UJY5 639 aa20.61■□□□□ 0.89
SREBF1-204ENST00000395756 PNOCQ13519 176 aa20.61■□□□□ 0.89
SREBF1-204ENST00000395756 EARS2Q5JPH6 523 aaKnown RBP20.61■□□□□ 0.89
SREBF1-204ENST00000395756 CD209Q9NNX6 404 aa20.61■□□□□ 0.89
SREBF1-204ENST00000395756 PLCD1P51178 756 aa20.6■□□□□ 0.89
SREBF1-204ENST00000395756 JMYQ8N9B5 988 aa20.6■□□□□ 0.89
SREBF1-204ENST00000395756 TDRD7Q8NHU6 1098 aaKnown RBP20.6■□□□□ 0.89
SREBF1-204ENST00000395756 KCNF1Q9H3M0 494 aa20.6■□□□□ 0.89
SREBF1-204ENST00000395756 POLLQ9UGP5 575 aa20.6■□□□□ 0.89
SREBF1-204ENST00000395756 PYCARDQ9ULZ3 195 aa20.6■□□□□ 0.89
SREBF1-204ENST00000395756 ARAP2Q8WZ64 1704 aa20.6■□□□□ 0.89
SREBF1-204ENST00000395756 OFD1O75665 1012 aa20.6■□□□□ 0.89
SREBF1-204ENST00000395756 ZNF75DP51815 510 aa20.6■□□□□ 0.89
SREBF1-204ENST00000395756 TXNRD1Q16881 649 aa20.6■□□□□ 0.89
SREBF1-204ENST00000395756 CTCFLQ8NI51 663 aaPredicted RBP20.6■□□□□ 0.89
SREBF1-204ENST00000395756 STX8Q9UNK0 236 aa20.6■□□□□ 0.89
SREBF1-204ENST00000395756 BAZ2AQ9UIF9 1905 aaKnown RBP20.6■□□□□ 0.89
SREBF1-204ENST00000395756 FOXN1O15353 648 aa20.59■□□□□ 0.89
SREBF1-204ENST00000395756 LONRF3Q496Y0 759 aa20.59■□□□□ 0.89
SREBF1-204ENST00000395756 MSL1Q68DK7 614 aa20.59■□□□□ 0.89
SREBF1-204ENST00000395756 CEP57L1Q8IYX8 460 aa20.59■□□□□ 0.89
SREBF1-204ENST00000395756 KLHL34Q8N239 644 aa20.59■□□□□ 0.89
SREBF1-204ENST00000395756 RBM17Q96I25 401 aaKnown RBP20.59■□□□□ 0.89
SREBF1-204ENST00000395756 NOL10Q9BSC4 688 aaKnown RBP20.59■□□□□ 0.89
SREBF1-204ENST00000395756 CLIP2Q9UDT6 1046 aa20.59■□□□□ 0.89
SREBF1-204ENST00000395756 BCORQ6W2J9 1755 aa20.59■□□□□ 0.89
SREBF1-204ENST00000395756 PKN1Q16512 942 aa20.59■□□□□ 0.89
SREBF1-204ENST00000395756 SRBD1Q8N5C6 995 aaKnown RBP20.59■□□□□ 0.89
SREBF1-204ENST00000395756 STK36Q9NRP7 1315 aa20.59■□□□□ 0.89
SREBF1-204ENST00000395756 RGL2O15211 777 aa20.59■□□□□ 0.89
SREBF1-204ENST00000395756 MFSD14BQ5SR56 506 aa20.59■□□□□ 0.89
SREBF1-204ENST00000395756 FILIP1Q7Z7B0 1213 aa20.59■□□□□ 0.89
SREBF1-204ENST00000395756 UTRNP46939 3433 aa20.58■□□□□ 0.89
SREBF1-204ENST00000395756 DHX40Q8IX18 779 aaKnown RBP20.58■□□□□ 0.89
SREBF1-204ENST00000395756 ZNF219Q9P2Y4 722 aaPredicted RBP20.58■□□□□ 0.89
SREBF1-204ENST00000395756 ARPP21Q9UBL0 812 aaPredicted RBP20.58■□□□□ 0.89
SREBF1-204ENST00000395756 USP49Q70CQ1 688 aa20.58■□□□□ 0.88
SREBF1-204ENST00000395756 KCNH3Q9ULD8 1083 aa20.58■□□□□ 0.88
SREBF1-204ENST00000395756 VGLL3A8MV65 326 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 GOLGA6L6A8MZA4 724 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 BAG3O95817 575 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 BTDP43251 543 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 NOLC1Q14978 699 aaKnown RBP eCLIP20.57■□□□□ 0.88
SREBF1-204ENST00000395756 HSP90AA4PQ58FG1 418 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 CNNM3Q8NE01 707 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.57■□□□□ 0.88
SREBF1-204ENST00000395756 IRS2Q9Y4H2 1338 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 CACNA1SQ13698 1873 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 GTF2IP78347 998 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 ARID5BQ14865 1188 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 RASGRP2Q7LDG7 609 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 KRI1Q8N9T8 703 aaKnown RBP20.57■□□□□ 0.88
SREBF1-204ENST00000395756 MXD3Q9BW11 206 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 CPVLQ9H3G5 476 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 DOCK2Q92608 1830 aa20.57■□□□□ 0.88
SREBF1-204ENST00000395756 XBP1P17861 261 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 ADRA2BP18089 450 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 GRAMD1CQ8IYS0 662 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 RNF26Q9BY78 433 aaPredicted RBP20.56■□□□□ 0.88
SREBF1-204ENST00000395756 PPP6R2O75170 966 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 GOLGA8HP0CJ92 632 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 TSPY3P0CV98 308 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 TSPY8P0CW00 308 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 ZNF174Q15697 407 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.56■□□□□ 0.88
SREBF1-204ENST00000395756 KAT14Q9H8E8 782 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 WNT7AO00755 349 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 ADAMTS3O15072 1205 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 POLR2DO15514 142 aaKnown RBP20.56■□□□□ 0.88
SREBF1-204ENST00000395756 PICALMQ13492 652 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 C12orf60Q5U649 245 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 ZNF444Q8N0Y2 327 aaPredicted RBP20.56■□□□□ 0.88
SREBF1-204ENST00000395756 STAG2Q8N3U4 1231 aa20.56■□□□□ 0.88
SREBF1-204ENST00000395756 TBC1D16Q8TBP0 767 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms