RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ZFP42Q96MM3 310 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 COA1Q9GZY4 146 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 MKRN1Q9UHC7 482 aaKnown RBP7.75□□□□□ -1.17
PTPN20-208ENST00000395727 PCDHGA11Q9Y5H2 935 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 PITPNM2Q9BZ72 1349 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 IRS2Q9Y4H2 1338 aa7.75□□□□□ -1.17
PTPN20-208ENST00000395727 ANKRD18BA2A2Z9 1011 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 F6X3S4 739 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 UPP2O95045 317 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 GNRH1P01148 92 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 BMP2P12643 396 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 ECE1P42892 770 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 VEGFBP49765 207 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 SCARF1Q14162 830 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 DEFB115Q30KQ5 88 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 CST9Q5W186 159 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 PURBQ96QR8 312 aaKnown RBP7.74□□□□□ -1.17
PTPN20-208ENST00000395727 MPHOSPH8Q99549 860 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 SRCIN1Q9C0H9 1055 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 GMPR2Q9P2T1 348 aaKnown RBP7.74□□□□□ -1.17
PTPN20-208ENST00000395727 ARAP2Q8WZ64 1704 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 ZNF804BA4D1E1 1349 aa7.74□□□□□ -1.17
PTPN20-208ENST00000395727 GTF2IP78347 998 aa7.73□□□□□ -1.17
PTPN20-208ENST00000395727 IFIT5Q13325 482 aaKnown RBP7.73□□□□□ -1.17
PTPN20-208ENST00000395727 KIF4BQ2VIQ3 1234 aa7.73□□□□□ -1.17
PTPN20-208ENST00000395727 RABL6Q3YEC7 729 aaPredicted RBP7.73□□□□□ -1.17
PTPN20-208ENST00000395727 C6orf118Q5T5N4 469 aa7.73□□□□□ -1.17
PTPN20-208ENST00000395727 STRIP1Q5VSL9 837 aa7.73□□□□□ -1.17
PTPN20-208ENST00000395727 SAPCD2Q86UD0 394 aa7.73□□□□□ -1.17
PTPN20-208ENST00000395727 TRIM50Q86XT4 487 aa7.73□□□□□ -1.17
PTPN20-208ENST00000395727 GPR101Q96P66 508 aaPredicted RBP7.73□□□□□ -1.17
PTPN20-208ENST00000395727 ZNF395Q9H8N7 513 aaPredicted RBP7.73□□□□□ -1.17
PTPN20-208ENST00000395727 KCNQ5Q9NR82 932 aa7.73□□□□□ -1.17
PTPN20-208ENST00000395727 WDR33Q9C0J8 1336 aaKnown RBP7.73□□□□□ -1.17
PTPN20-208ENST00000395727 PAPPA2Q9BXP8 1791 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 A0A1W2PRU2 124 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 SHTN1A0MZ66 631 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 TRAF5O00463 557 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 EGFRP00533 1210 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 MAP2K2P36507 400 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 FKBP1AP62942 108 aaKnown RBP7.72□□□□□ -1.17
PTPN20-208ENST00000395727 MAP2K1Q02750 393 aaPredicted RBP7.72□□□□□ -1.17
PTPN20-208ENST00000395727 CHRNDQ07001 517 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 CLN3Q13286 438 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 DACT2Q5SW24 774 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 TRIM47Q96LD4 638 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 GLIS2Q9BZE0 524 aaPredicted RBP7.72□□□□□ -1.17
PTPN20-208ENST00000395727 SENP2Q9HC62 589 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 ARHGEF10LQ9HCE6 1279 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 PRDM10Q9NQV6 1147 aa7.72□□□□□ -1.17
PTPN20-208ENST00000395727 C9orf78Q9NZ63 289 aaPredicted RBP7.72□□□□□ -1.17
PTPN20-208ENST00000395727 ABT1Q9ULW3 272 aaKnown RBP7.72□□□□□ -1.17
PTPN20-208ENST00000395727 COL1A1P02452 1464 aaPredicted RBP7.72□□□□□ -1.17
PTPN20-208ENST00000395727 ECM29Q5VYK3 1845 aa7.71□□□□□ -1.17
PTPN20-208ENST00000395727 WTIPA6NIX2 430 aaPredicted RBP7.71□□□□□ -1.18
PTPN20-208ENST00000395727 ZBTB7BO15156 539 aaPredicted RBP7.71□□□□□ -1.18
PTPN20-208ENST00000395727 CELF2O95319 508 aaKnown RBP7.71□□□□□ -1.18
PTPN20-208ENST00000395727 IL1R1P14778 569 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 CTCFP49711 727 aaPredicted RBP7.71□□□□□ -1.18
PTPN20-208ENST00000395727 FKBP1BP68106 108 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 CLDN10P78369 228 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 FMR1Q06787 632 aaKnown RBP eCLIP7.71□□□□□ -1.18
PTPN20-208ENST00000395727 CCDC57Q2TAC2 916 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 TBC1D10BQ4KMP7 808 aaPredicted RBP7.71□□□□□ -1.18
PTPN20-208ENST00000395727 EPHA10Q5JZY3 1008 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 LMBR1LQ6UX01 489 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 KRT26Q7Z3Y9 468 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 TXNRD3Q86VQ6 643 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 SSH1Q8WYL5 1049 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 KIFC2Q96AC6 838 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 DCPSQ96C86 337 aaKnown RBP7.71□□□□□ -1.18
PTPN20-208ENST00000395727 KAZALD1Q96I82 304 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 CAPNS2Q96L46 248 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 INSM2Q96T92 566 aaPredicted RBP7.71□□□□□ -1.18
PTPN20-208ENST00000395727 MYOZ2Q9NPC6 264 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 GGA3Q9NZ52 723 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 HRH3Q9Y5N1 445 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 KIF16BQ96L93 1317 aa7.71□□□□□ -1.18
PTPN20-208ENST00000395727 LAMB1P07942 1786 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 FOXN1O15353 648 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 CA12O43570 354 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 STAU1O95793 577 aaKnown RBP7.7□□□□□ -1.18
PTPN20-208ENST00000395727 IL2RAP01589 272 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 NBPF7P0C2Y1 421 aaPredicted RBP7.7□□□□□ -1.18
PTPN20-208ENST00000395727 CTSOP43234 321 aaPredicted RBP7.7□□□□□ -1.18
PTPN20-208ENST00000395727 UBE4AQ14139 1066 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 COL13A1Q5TAT6 717 aaPredicted RBP7.7□□□□□ -1.18
PTPN20-208ENST00000395727 SLC4A10Q6U841 1118 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 LDHAL6AQ6ZMR3 332 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 ZNF804AQ7Z570 1209 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 OGFOD1Q8N543 542 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 AIDAQ96BJ3 306 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 XAGE2Q96GT9 111 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 SUCLG2Q96I99 432 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 ZBED3Q96IU2 234 aaPredicted RBP7.7□□□□□ -1.18
PTPN20-208ENST00000395727 ETNK1Q9HBU6 452 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 CD209Q9NNX6 404 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 RAB6BQ9NRW1 208 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 KIAA1024Q9UPX6 916 aa7.7□□□□□ -1.18
PTPN20-208ENST00000395727 MROH5Q6ZUA9 1318 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms