RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 TLR7Q9NYK1 1049 aaKnown RBP16.56■□□□□ 0.24
SCAF11-203ENST00000395453 STXBP5LQ9Y2K9 1186 aa16.56■□□□□ 0.24
SCAF11-203ENST00000395453 PHIPQ8WWQ0 1821 aa16.55■□□□□ 0.24
SCAF11-203ENST00000395453 A0A0G2JLL6 359 aaPredicted RBP16.55■□□□□ 0.24
SCAF11-203ENST00000395453 PRRT2Q7Z6L0 340 aaPredicted RBP16.55■□□□□ 0.24
SCAF11-203ENST00000395453 TEX11Q8IYF3 940 aa16.55■□□□□ 0.24
SCAF11-203ENST00000395453 SLC45A1Q9Y2W3 748 aa16.55■□□□□ 0.24
SCAF11-203ENST00000395453 UNC80Q8N2C7 3258 aa16.55■□□□□ 0.24
SCAF11-203ENST00000395453 DOCK1Q14185 1865 aa16.54■□□□□ 0.24
SCAF11-203ENST00000395453 BAG3O95817 575 aa16.54■□□□□ 0.24
SCAF11-203ENST00000395453 PLCG2P16885 1265 aa16.54■□□□□ 0.24
SCAF11-203ENST00000395453 ADGRA1Q86SQ6 560 aa16.54■□□□□ 0.24
SCAF11-203ENST00000395453 ERC1Q8IUD2 1116 aa16.54■□□□□ 0.24
SCAF11-203ENST00000395453 SH3RF3Q8TEJ3 882 aaPredicted RBP16.54■□□□□ 0.24
SCAF11-203ENST00000395453 PIH1D3Q9NQM4 214 aaKnown RBP16.54■□□□□ 0.24
SCAF11-203ENST00000395453 ZBTB40Q9NUA8 1239 aa16.54■□□□□ 0.24
SCAF11-203ENST00000395453 EXOC6BQ9Y2D4 811 aa16.54■□□□□ 0.24
SCAF11-203ENST00000395453 MAST2Q6P0Q8 1798 aa16.53■□□□□ 0.24
SCAF11-203ENST00000395453 PTPRFP10586 1907 aa16.53■□□□□ 0.24
SCAF11-203ENST00000395453 LRIT3Q3SXY7 679 aa16.53■□□□□ 0.24
SCAF11-203ENST00000395453 RPAP2Q8IXW5 612 aaPredicted RBP16.53■□□□□ 0.24
SCAF11-203ENST00000395453 ANKLE1Q8NAG6 615 aa16.53■□□□□ 0.24
SCAF11-203ENST00000395453 SMCR8Q8TEV9 937 aaPredicted RBP16.53■□□□□ 0.24
SCAF11-203ENST00000395453 COA7Q96BR5 231 aa16.53■□□□□ 0.24
SCAF11-203ENST00000395453 NOL10Q9BSC4 688 aaKnown RBP16.53■□□□□ 0.24
SCAF11-203ENST00000395453 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCAF11-203ENST00000395453 AATFQ9NY61 560 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCAF11-203ENST00000395453 DDX19BQ9UMR2 479 aa16.53■□□□□ 0.24
SCAF11-203ENST00000395453 HSP90AB4PQ58FF6 505 aa16.52■□□□□ 0.24
SCAF11-203ENST00000395453 GADL1Q6ZQY3 521 aa16.52■□□□□ 0.24
SCAF11-203ENST00000395453 METTL16Q86W50 562 aaKnown RBP16.52■□□□□ 0.24
SCAF11-203ENST00000395453 SIRT2Q8IXJ6 389 aa16.52■□□□□ 0.24
SCAF11-203ENST00000395453 C7orf61Q8IZ16 206 aa16.52■□□□□ 0.24
SCAF11-203ENST00000395453 CDK5RAP2Q96SN8 1893 aa16.52■□□□□ 0.24
SCAF11-203ENST00000395453 DHX36Q9H2U1 1008 aaKnown RBP16.52■□□□□ 0.24
SCAF11-203ENST00000395453 HERC5Q9UII4 1024 aaKnown RBP16.52■□□□□ 0.24
SCAF11-203ENST00000395453 RCAN3Q9UKA8 241 aa16.52■□□□□ 0.24
SCAF11-203ENST00000395453 TAOK2Q9UL54 1235 aa16.52■□□□□ 0.24
SCAF11-203ENST00000395453 FAM196BA6NMK8 535 aa16.51■□□□□ 0.23
SCAF11-203ENST00000395453 RRP1BQ14684 758 aaKnown RBP16.51■□□□□ 0.23
SCAF11-203ENST00000395453 Q7L0L9 218 aa16.51■□□□□ 0.23
SCAF11-203ENST00000395453 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
SCAF11-203ENST00000395453 DIS3LQ8TF46 1054 aaKnown RBP16.51■□□□□ 0.23
SCAF11-203ENST00000395453 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.51■□□□□ 0.23
SCAF11-203ENST00000395453 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.51■□□□□ 0.23
SCAF11-203ENST00000395453 PI4KBQ9UBF8 816 aa16.51■□□□□ 0.23
SCAF11-203ENST00000395453 ZMYND8Q9ULU4 1186 aaPredicted RBP16.51■□□□□ 0.23
SCAF11-203ENST00000395453 COG6Q9Y2V7 657 aa16.51■□□□□ 0.23
SCAF11-203ENST00000395453 FOCADQ5VW36 1801 aa16.51■□□□□ 0.23
SCAF11-203ENST00000395453 CAP2P40123 477 aa16.5■□□□□ 0.23
SCAF11-203ENST00000395453 TMED8Q6PL24 325 aaPredicted RBP16.5■□□□□ 0.23
SCAF11-203ENST00000395453 AACSQ86V21 672 aa16.5■□□□□ 0.23
SCAF11-203ENST00000395453 TDHQ8IZJ6 230 aa16.5■□□□□ 0.23
SCAF11-203ENST00000395453 TGFBRAP1Q8WUH2 860 aa16.5■□□□□ 0.23
SCAF11-203ENST00000395453 MTMR10Q9NXD2 777 aa16.5■□□□□ 0.23
SCAF11-203ENST00000395453 ALPK3Q96L96 1907 aa16.5■□□□□ 0.23
SCAF11-203ENST00000395453 SIPA1L1O43166 1804 aa16.5■□□□□ 0.23
SCAF11-203ENST00000395453 CYP7A1P22680 504 aa16.49■□□□□ 0.23
SCAF11-203ENST00000395453 CCDC84Q86UT8 332 aaPredicted RBP16.49■□□□□ 0.23
SCAF11-203ENST00000395453 FOXP4Q8IVH2 680 aaPredicted RBP16.49■□□□□ 0.23
SCAF11-203ENST00000395453 TBC1D2Q9BYX2 928 aa16.49■□□□□ 0.23
SCAF11-203ENST00000395453 NBPF3Q9H094 633 aa16.49■□□□□ 0.23
SCAF11-203ENST00000395453 ANTXR1Q9H6X2 564 aa16.49■□□□□ 0.23
SCAF11-203ENST00000395453 NDUFB9Q9Y6M9 179 aa16.49■□□□□ 0.23
SCAF11-203ENST00000395453 FLT1P17948 1338 aa16.49■□□□□ 0.23
SCAF11-203ENST00000395453 ATAD5Q96QE3 1844 aa16.48■□□□□ 0.23
SCAF11-203ENST00000395453 TRIM75PA6NK02 468 aa16.48■□□□□ 0.23
SCAF11-203ENST00000395453 HMMRO75330 724 aa16.48■□□□□ 0.23
SCAF11-203ENST00000395453 IDH1O75874 414 aaKnown RBP16.48■□□□□ 0.23
SCAF11-203ENST00000395453 MAGEA10P43363 369 aaPredicted RBP16.48■□□□□ 0.23
SCAF11-203ENST00000395453 DYNLL1P63167 89 aaKnown RBP16.48■□□□□ 0.23
SCAF11-203ENST00000395453 CERS3Q8IU89 383 aa16.48■□□□□ 0.23
SCAF11-203ENST00000395453 MAPKAPK5Q8IW41 473 aa16.48■□□□□ 0.23
SCAF11-203ENST00000395453 ANKRD13CQ8N6S4 541 aa16.48■□□□□ 0.23
SCAF11-203ENST00000395453 KIF1BPQ96EK5 621 aa16.48■□□□□ 0.23
SCAF11-203ENST00000395453 CHMP4BQ9H444 224 aaKnown RBP16.48■□□□□ 0.23
SCAF11-203ENST00000395453 IL1RAPL2Q9NP60 686 aa16.48■□□□□ 0.23
SCAF11-203ENST00000395453 DOCK3Q8IZD9 2030 aa16.48■□□□□ 0.23
SCAF11-203ENST00000395453 USP17L5A8MUK1 530 aa16.47■□□□□ 0.23
SCAF11-203ENST00000395453 HMGCRP04035 888 aa16.47■□□□□ 0.23
SCAF11-203ENST00000395453 SPP2Q13103 211 aa16.47■□□□□ 0.23
SCAF11-203ENST00000395453 PDE3AQ14432 1141 aa16.47■□□□□ 0.23
SCAF11-203ENST00000395453 FAM110CQ1W6H9 321 aa16.47■□□□□ 0.23
SCAF11-203ENST00000395453 PROCA1Q8NCQ7 364 aaPredicted RBP16.47■□□□□ 0.23
SCAF11-203ENST00000395453 ZNF280CQ8ND82 737 aa16.47■□□□□ 0.23
SCAF11-203ENST00000395453 COL25A1Q9BXS0 654 aaPredicted RBP16.47■□□□□ 0.23
SCAF11-203ENST00000395453 DNAJC18Q9H819 358 aa16.47■□□□□ 0.23
SCAF11-203ENST00000395453 HMX1Q9NP08 348 aaPredicted RBP16.47■□□□□ 0.23
SCAF11-203ENST00000395453 PNMA3Q9UL41 463 aa16.47■□□□□ 0.23
SCAF11-203ENST00000395453 PALD1Q9ULE6 856 aa16.47■□□□□ 0.23
SCAF11-203ENST00000395453 AGTPBP1Q9UPW5 1226 aa16.47■□□□□ 0.23
SCAF11-203ENST00000395453 RPTORQ8N122 1335 aa16.47■□□□□ 0.23
SCAF11-203ENST00000395453 RAB11FIP3O75154 756 aa16.46■□□□□ 0.23
SCAF11-203ENST00000395453 SYN1P17600 705 aa16.46■□□□□ 0.23
SCAF11-203ENST00000395453 MAP3K12Q12852 859 aa16.46■□□□□ 0.23
SCAF11-203ENST00000395453 SH3D19Q5HYK7 790 aa16.46■□□□□ 0.23
SCAF11-203ENST00000395453 CLASRPQ8N2M8 674 aaKnown RBP16.46■□□□□ 0.23
SCAF11-203ENST00000395453 MAGEB6Q8N7X4 407 aa16.46■□□□□ 0.23
SCAF11-203ENST00000395453 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.46■□□□□ 0.23
SCAF11-203ENST00000395453 UBE2OQ9C0C9 1292 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms