RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 ANGEL1Q9UNK9 670 aaKnown RBP22.59■■□□□ 1.21
LMNB1-202ENST00000395354 KIF3AQ9Y496 699 aa22.59■■□□□ 1.21
LMNB1-202ENST00000395354 CNTNAP1P78357 1384 aa22.59■■□□□ 1.21
LMNB1-202ENST00000395354 LDHDQ86WU2 507 aa22.59■■□□□ 1.21
LMNB1-202ENST00000395354 SULF1Q8IWU6 871 aa22.59■■□□□ 1.21
LMNB1-202ENST00000395354 NEDD4P46934 1319 aa22.58■■□□□ 1.21
LMNB1-202ENST00000395354 B4E1Z4 1266 aa22.58■■□□□ 1.2
LMNB1-202ENST00000395354 USP17L12C9JPN9 530 aa22.58■■□□□ 1.2
LMNB1-202ENST00000395354 USP17L21D6R901 530 aa22.58■■□□□ 1.2
LMNB1-202ENST00000395354 SH2B2O14492 632 aaPredicted RBP22.58■■□□□ 1.2
LMNB1-202ENST00000395354 DHX16O60231 1041 aaKnown RBP22.58■■□□□ 1.2
LMNB1-202ENST00000395354 CTDSPL2Q05D32 466 aa22.58■■□□□ 1.2
LMNB1-202ENST00000395354 FOXD4L5Q5VV16 416 aaPredicted RBP22.58■■□□□ 1.2
LMNB1-202ENST00000395354 CYB5R4Q7L1T6 521 aa22.58■■□□□ 1.2
LMNB1-202ENST00000395354 ZSCAN29Q8IWY8 852 aaPredicted RBP22.58■■□□□ 1.2
LMNB1-202ENST00000395354 FOXD4L4Q8WXT5 416 aaPredicted RBP22.58■■□□□ 1.2
LMNB1-202ENST00000395354 TMEM39BQ9GZU3 492 aa22.58■■□□□ 1.2
LMNB1-202ENST00000395354 LMBRD1Q9NUN5 540 aa22.58■■□□□ 1.2
LMNB1-202ENST00000395354 FOCADQ5VW36 1801 aa22.58■■□□□ 1.2
LMNB1-202ENST00000395354 CTR9Q6PD62 1173 aa22.57■■□□□ 1.2
LMNB1-202ENST00000395354 KRT26Q7Z3Y9 468 aa22.57■■□□□ 1.2
LMNB1-202ENST00000395354 NSUN7Q8NE18 718 aaKnown RBP22.57■■□□□ 1.2
LMNB1-202ENST00000395354 BAZ2AQ9UIF9 1905 aaKnown RBP22.56■■□□□ 1.2
LMNB1-202ENST00000395354 POLR3DP05423 398 aaPredicted RBP22.56■■□□□ 1.2
LMNB1-202ENST00000395354 LIFRP42702 1097 aa22.56■■□□□ 1.2
LMNB1-202ENST00000395354 SH3BP5LQ7L8J4 393 aa22.56■■□□□ 1.2
LMNB1-202ENST00000395354 DHX36Q9H2U1 1008 aaKnown RBP22.56■■□□□ 1.2
LMNB1-202ENST00000395354 KLF18A0A0U1RQI7 1052 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 DDTLA6NHG4 134 aaPredicted RBP22.55■■□□□ 1.2
LMNB1-202ENST00000395354 KLHL40Q2TBA0 621 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 SLC4A8Q2Y0W8 1093 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 SBK1Q52WX2 424 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 MAP1SQ66K74 1059 aaPredicted RBP22.55■■□□□ 1.2
LMNB1-202ENST00000395354 CDC37L1Q7L3B6 337 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 USP48Q86UV5 1035 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 SGMS1Q86VZ5 419 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 AMOTL1Q8IY63 956 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 ZNF784Q8NCA9 323 aaPredicted RBP22.55■■□□□ 1.2
LMNB1-202ENST00000395354 IGDCC4Q8TDY8 1250 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 BRPF3Q9ULD4 1205 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 MYH1P12882 1939 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 MINDY4BA8MYZ0 360 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 KIF3CO14782 793 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 FGRP09769 529 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 NT5C2P49902 561 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 TTC6Q86TZ1 520 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 GPHNQ9NQX3 736 aaPredicted RBP22.55■■□□□ 1.2
LMNB1-202ENST00000395354 ZSWIM5Q9P217 1185 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 ARPP21Q9UBL0 812 aaPredicted RBP22.55■■□□□ 1.2
LMNB1-202ENST00000395354 PPP2R3BQ9Y5P8 575 aa22.55■■□□□ 1.2
LMNB1-202ENST00000395354 CYP2D7A0A087X1C5 515 aa22.54■■□□□ 1.2
LMNB1-202ENST00000395354 ADM5C9JUS6 153 aa22.54■■□□□ 1.2
LMNB1-202ENST00000395354 JAK2O60674 1132 aa22.54■■□□□ 1.2
LMNB1-202ENST00000395354 KDM4AO75164 1064 aa22.54■■□□□ 1.2
LMNB1-202ENST00000395354 CTDNEP1O95476 244 aa22.54■■□□□ 1.2
LMNB1-202ENST00000395354 CYP2D6P10635 497 aa22.54■■□□□ 1.2
LMNB1-202ENST00000395354 PLCD1P51178 756 aa22.54■■□□□ 1.2
LMNB1-202ENST00000395354 SART3Q15020 963 aaKnown RBP22.54■■□□□ 1.2
LMNB1-202ENST00000395354 C12orf60Q5U649 245 aa22.54■■□□□ 1.2
LMNB1-202ENST00000395354 PRAMEF18Q5VWM3 479 aa22.54■■□□□ 1.2
LMNB1-202ENST00000395354 FAM184AQ8NB25 1140 aa22.54■■□□□ 1.2
LMNB1-202ENST00000395354 TEPSINQ96N21 525 aa22.54■■□□□ 1.2
LMNB1-202ENST00000395354 GLIS2Q9BZE0 524 aaPredicted RBP22.54■■□□□ 1.2
LMNB1-202ENST00000395354 NAP1L2Q9ULW6 460 aaPredicted RBP22.54■■□□□ 1.2
LMNB1-202ENST00000395354 TACC3Q9Y6A5 838 aa22.54■■□□□ 1.2
LMNB1-202ENST00000395354 PTPDC1A2A3K4 754 aa22.53■■□□□ 1.2
LMNB1-202ENST00000395354 VPS37CA5D8V6 355 aaPredicted RBP22.53■■□□□ 1.2
LMNB1-202ENST00000395354 GOLGA8BA8MQT2 603 aa22.53■■□□□ 1.2
LMNB1-202ENST00000395354 CCT2P78371 535 aaKnown RBP22.53■■□□□ 1.2
LMNB1-202ENST00000395354 DLK2Q6UY11 383 aa22.53■■□□□ 1.2
LMNB1-202ENST00000395354 CDAN1Q8IWY9 1227 aa22.53■■□□□ 1.2
LMNB1-202ENST00000395354 TMTC2Q8N394 836 aa22.53■■□□□ 1.2
LMNB1-202ENST00000395354 TMEM87AQ8NBN3 555 aa22.53■■□□□ 1.2
LMNB1-202ENST00000395354 CSRNP1Q96S65 589 aa22.53■■□□□ 1.2
LMNB1-202ENST00000395354 PI4KBQ9UBF8 816 aa22.53■■□□□ 1.2
LMNB1-202ENST00000395354 HPS5Q9UPZ3 1129 aa22.53■■□□□ 1.2
LMNB1-202ENST00000395354 ATRNL1Q5VV63 1379 aa22.53■■□□□ 1.2
LMNB1-202ENST00000395354 NAV1Q8NEY1 1877 aa22.53■■□□□ 1.2
LMNB1-202ENST00000395354 PRPF40AO75400 957 aaKnown RBP22.52■■□□□ 1.2
LMNB1-202ENST00000395354 HLA-DOAP06340 250 aa22.52■■□□□ 1.2
LMNB1-202ENST00000395354 DEKP35659 375 aaKnown RBP22.52■■□□□ 1.2
LMNB1-202ENST00000395354 TMEM67Q5HYA8 995 aa22.52■■□□□ 1.2
LMNB1-202ENST00000395354 CHADLQ6NUI6 762 aa22.52■■□□□ 1.2
LMNB1-202ENST00000395354 RGS22Q8NE09 1264 aa22.52■■□□□ 1.2
LMNB1-202ENST00000395354 ESR2Q92731 530 aa22.52■■□□□ 1.2
LMNB1-202ENST00000395354 LY9Q9HBG7 655 aa22.52■■□□□ 1.2
LMNB1-202ENST00000395354 COL2A1P02458 1487 aaPredicted RBP22.52■■□□□ 1.2
LMNB1-202ENST00000395354 SLC3A2P08195 630 aaKnown RBP22.51■■□□□ 1.19
LMNB1-202ENST00000395354 EVX2Q03828 476 aa22.51■■□□□ 1.19
LMNB1-202ENST00000395354 NBPF12Q5TAG4 269 aaPredicted RBP22.51■■□□□ 1.19
LMNB1-202ENST00000395354 DDX49Q9Y6V7 483 aaKnown RBP22.51■■□□□ 1.19
LMNB1-202ENST00000395354 SMIM22K7EJ46 135 aa22.5■■□□□ 1.19
LMNB1-202ENST00000395354 IFIT3O14879 490 aaKnown RBP22.5■■□□□ 1.19
LMNB1-202ENST00000395354 RCAN1P53805 252 aa22.5■■□□□ 1.19
LMNB1-202ENST00000395354 CSPP1Q1MSJ5 1256 aa22.5■■□□□ 1.19
LMNB1-202ENST00000395354 APOA5Q6Q788 366 aa22.5■■□□□ 1.19
LMNB1-202ENST00000395354 FOXP4Q8IVH2 680 aaPredicted RBP22.5■■□□□ 1.19
LMNB1-202ENST00000395354 NKX2-3Q8TAU0 364 aa22.5■■□□□ 1.19
LMNB1-202ENST00000395354 NCOA5Q9HCD5 579 aaKnown RBP22.5■■□□□ 1.19
LMNB1-202ENST00000395354 INCENPQ9NQS7 918 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms