RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 GLYCTKQ8IVS8 523 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 RASEFQ8IZ41 740 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 DEPDC4Q8N2C3 294 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 MAGEB6Q8N7X4 407 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 BRSK1Q8TDC3 778 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 THAP11Q96EK4 314 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 SARGQ9BW04 601 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 CD2APQ9Y5K6 639 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 MROH2BQ7Z745 1585 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 USP31Q70CQ4 1352 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 LRRC72A6NJI9 287 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 M0QX08 132 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 GUCY2CP25092 1073 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 POLD2P49005 469 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 WSCD2Q2TBF2 565 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 CKAP2LQ8IYA6 745 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 HNRNPLLQ8WVV9 542 aaKnown RBP4.88□□□□□ -1.63
HERC4-204ENST00000395198 THOC1Q96FV9 657 aaKnown RBP4.88□□□□□ -1.63
HERC4-204ENST00000395198 BRMS1Q9HCU9 246 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 TCF7L2Q9NQB0 619 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 EPN1Q9Y6I3 576 aaPredicted RBP4.88□□□□□ -1.63
HERC4-204ENST00000395198 BIVM-ERCC5R4GMW8 1640 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 BTBD11A6QL63 1104 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 WASLO00401 505 aaPredicted RBP4.88□□□□□ -1.63
HERC4-204ENST00000395198 NCAM2O15394 837 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 TREHO43280 583 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 PLOD3O60568 738 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 CYP17A1P05093 508 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 PRPHP41219 470 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 FAM102BQ5T8I3 360 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 OLFML1Q6UWY5 402 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 ARHGEF18Q6ZSZ5 1173 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 RSRC2Q7L4I2 434 aaKnown RBP4.88□□□□□ -1.63
HERC4-204ENST00000395198 BEND5Q7L4P6 421 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 OSCARQ8IYS5 282 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 RTKN2Q8IZC4 609 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 BICD1Q96G01 975 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 EXOC1Q9NV70 894 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 VTI1BQ9UEU0 232 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 EGFL7Q9UHF1 273 aa4.88□□□□□ -1.63
HERC4-204ENST00000395198 RAD50Q92878 1312 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 ATAD2BQ9ULI0 1458 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 TSPY2A6NKD2 308 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 ESPNB1AK53 854 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.87□□□□□ -1.63
HERC4-204ENST00000395198 C21orf2O43822 256 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 SKAP2O75563 359 aaPredicted RBP4.87□□□□□ -1.63
HERC4-204ENST00000395198 TSPY3P0CV98 308 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 TSPY8P0CW00 308 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 CYP11B2P19099 503 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 NEK2P51955 445 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 POLR2FP61218 127 aaKnown RBP4.87□□□□□ -1.63
HERC4-204ENST00000395198 TSPY1Q01534 308 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 CHAF1AQ13111 956 aaPredicted RBP4.87□□□□□ -1.63
HERC4-204ENST00000395198 SMAD4Q13485 552 aaKnown RBP4.87□□□□□ -1.63
HERC4-204ENST00000395198 PIN1Q13526 163 aaPredicted RBP4.87□□□□□ -1.63
HERC4-204ENST00000395198 KRT72Q14CN4 511 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 SMUG1Q53HV7 270 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 NXNQ6DKJ4 435 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 LDHAL6AQ6ZMR3 332 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 LHFPL2Q6ZUX7 228 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 RPAP2Q8IXW5 612 aaPredicted RBP4.87□□□□□ -1.63
HERC4-204ENST00000395198 CLIP3Q96DZ5 547 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 RHOBTB2Q9BYZ6 727 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 OBP2AQ9NY56 170 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 SPATA7Q9P0W8 599 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 SEPT3Q9UH03 358 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 K7ENM7 598 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 TMCC2O75069 709 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 TIPRLO75663 272 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 LIMK1P53667 647 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 TTC39AQ5SRH9 613 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 BNC2Q6ZN30 1099 aaPredicted RBP4.87□□□□□ -1.63
HERC4-204ENST00000395198 IPMKQ8NFU5 416 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 FBXO41Q8TF61 875 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 NEUROD4Q9HD90 331 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 KCNQ5Q9NR82 932 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.87□□□□□ -1.633e-7■■■□□ 17.8
HERC4-204ENST00000395198 SOGA1O94964 1423 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 XPOTO43592 962 aaKnown RBP4.87□□□□□ -1.63
HERC4-204ENST00000395198 ALAS1P13196 640 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 WEE1P30291 646 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 HOXD12P35452 270 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 TGFB2P61812 414 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 TRIM8Q9BZR9 551 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 PDP2Q9P2J9 529 aa4.87□□□□□ -1.63
HERC4-204ENST00000395198 RASGRP1O95267 797 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 IFIT1P09914 478 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 HARSP12081 509 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 KRT10P13645 584 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 FGFR4P22455 802 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 CENPAP49450 140 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 PAPOLAP51003 745 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 CSE1LP55060 971 aaKnown RBP4.86□□□□□ -1.63
HERC4-204ENST00000395198 LMNB2Q03252 620 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 RAB33AQ14088 237 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 SLC45A4Q5BKX6 768 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 ANKS3Q6ZW76 656 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 CCDC68Q9H2F9 335 aa4.86□□□□□ -1.63
HERC4-204ENST00000395198 SEMA4AQ9H3S1 761 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms