RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 C8orf76Q96K31 380 aa11.88□□□□□ -0.51
HIF1A-203ENST00000394997 POLR3DP05423 398 aaPredicted RBP11.88□□□□□ -0.51
HIF1A-203ENST00000394997 FOSBP53539 338 aa11.88□□□□□ -0.51
HIF1A-203ENST00000394997 CEBPZQ03701 1054 aaKnown RBP11.88□□□□□ -0.51
HIF1A-203ENST00000394997 LRRFIP1Q32MZ4 808 aaKnown RBP11.88□□□□□ -0.51
HIF1A-203ENST00000394997 MIGA1Q8NAN2 632 aa11.88□□□□□ -0.51
HIF1A-203ENST00000394997 MTRQ99707 1265 aa11.88□□□□□ -0.51
HIF1A-203ENST00000394997 OSBPL5Q9H0X9 879 aaPredicted RBP11.88□□□□□ -0.51
HIF1A-203ENST00000394997 DCP1AQ9NPI6 582 aaPredicted RBP11.88□□□□□ -0.51
HIF1A-203ENST00000394997 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.88□□□□□ -0.51
HIF1A-203ENST00000394997 V9GYY5 206 aaPredicted RBP11.88□□□□□ -0.51
HIF1A-203ENST00000394997 CCDC66A2RUB6 948 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 USP27XA6NNY8 438 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 GOLGA6L19H0YKK7 550 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 SEMA3EO15041 775 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 SPTLC2O15270 562 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 CLIC6Q96NY7 704 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 ZNF202O95125 648 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 PRDX5P30044 214 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 ZNF18P17022 549 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 ZNF165P49910 485 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 GORABQ5T7V8 394 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 CMTR1Q8N1G2 835 aaKnown RBP11.87□□□□□ -0.51
HIF1A-203ENST00000394997 KCNG4Q8TDN1 519 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 PRIMPOLQ96LW4 560 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 CDC5LQ99459 802 aaKnown RBP11.87□□□□□ -0.51
HIF1A-203ENST00000394997 ALG1Q9BT22 464 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 SPATA31A6Q5VVP1 1343 aa11.87□□□□□ -0.51
HIF1A-203ENST00000394997 BECN2A8MW95 431 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 NRDCO43847 1150 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 NFIXQ14938 502 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 E2F4Q16254 413 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 LONRF3Q496Y0 759 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 USP49Q70CQ1 688 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 CCAR2Q8N163 923 aaKnown RBP11.86□□□□□ -0.51
HIF1A-203ENST00000394997 FSIP1Q8NA03 581 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 FOXP1Q9H334 677 aaPredicted RBP11.86□□□□□ -0.51
HIF1A-203ENST00000394997 SLC4A4Q9Y6R1 1079 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 CTAGE5O15320 804 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 PLEKHA8P1O95397 391 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 PTPREP23469 700 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 MAP3K12Q12852 859 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 BICD2Q8TD16 824 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 AIDAQ96BJ3 306 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 ZKSCAN3Q9BRR0 538 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 LOC285556D6RIA3 1793 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 ZBTB43O43298 467 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 NMT2O60551 498 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 CAVIN2O95810 425 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 TBX2Q13207 712 aaPredicted RBP11.86□□□□□ -0.51
HIF1A-203ENST00000394997 NR5A1Q13285 461 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 TAF7LQ5H9L4 462 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 TYW1BQ6NUM6 668 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 ARMCX5Q6P1M9 558 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 NOSTRINQ8IVI9 506 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 LRRC8AQ8IWT6 810 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 MYRIPQ8NFW9 859 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 CNNM2Q9H8M5 875 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 PCDHB6Q9Y5E3 794 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 TNKSO95271 1327 aa11.86□□□□□ -0.51
HIF1A-203ENST00000394997 COL4A5P29400 1685 aa11.85□□□□□ -0.51
HIF1A-203ENST00000394997 BTBD18B2RXH4 712 aa11.85□□□□□ -0.51
HIF1A-203ENST00000394997 STX1AQ16623 288 aa11.85□□□□□ -0.51
HIF1A-203ENST00000394997 ZNF654Q8IZM8 581 aa11.85□□□□□ -0.51
HIF1A-203ENST00000394997 SRBD1Q8N5C6 995 aaKnown RBP11.85□□□□□ -0.51
HIF1A-203ENST00000394997 FANCBQ8NB91 859 aa11.85□□□□□ -0.51
HIF1A-203ENST00000394997 BAZ2BQ9UIF8 2168 aaKnown RBP11.85□□□□□ -0.51
HIF1A-203ENST00000394997 PRR29P0C7W0 189 aa11.85□□□□□ -0.51
HIF1A-203ENST00000394997 DPF2Q92785 391 aa11.85□□□□□ -0.51
HIF1A-203ENST00000394997 RTFDC1Q9BY42 306 aaPredicted RBP11.85□□□□□ -0.51
HIF1A-203ENST00000394997 H3BQV1 296 aa11.85□□□□□ -0.51
HIF1A-203ENST00000394997 CYP2D6P10635 497 aa11.85□□□□□ -0.51
HIF1A-203ENST00000394997 GNL2Q13823 731 aaKnown RBP11.85□□□□□ -0.51
HIF1A-203ENST00000394997 IFFO2Q5TF58 517 aa11.85□□□□□ -0.51
HIF1A-203ENST00000394997 ZNF579Q8NAF0 562 aaKnown RBP11.85□□□□□ -0.51
HIF1A-203ENST00000394997 ZNF396Q96N95 335 aaPredicted RBP11.85□□□□□ -0.51
HIF1A-203ENST00000394997 KRT23Q9C075 422 aa11.85□□□□□ -0.51
HIF1A-203ENST00000394997 PLIN4Q96Q06 1357 aa11.85□□□□□ -0.51
HIF1A-203ENST00000394997 FAM182BQ5T319 152 aa11.84□□□□□ -0.51
HIF1A-203ENST00000394997 MICU3Q86XE3 530 aa11.84□□□□□ -0.51
HIF1A-203ENST00000394997 IL1R1P14778 569 aa11.84□□□□□ -0.51
HIF1A-203ENST00000394997 NLRP12P59046 1061 aa11.84□□□□□ -0.51
HIF1A-203ENST00000394997 TMEM67Q5HYA8 995 aa11.84□□□□□ -0.51
HIF1A-203ENST00000394997 RNF26Q9BY78 433 aaPredicted RBP11.84□□□□□ -0.51
HIF1A-203ENST00000394997 IQSEC3Q9UPP2 1182 aaPredicted RBP11.84□□□□□ -0.51
HIF1A-203ENST00000394997 PRPF3O43395 683 aaKnown RBP11.84□□□□□ -0.51
HIF1A-203ENST00000394997 CYTH3O43739 400 aa11.84□□□□□ -0.51
HIF1A-203ENST00000394997 ZSCAN10Q96SZ4 725 aaPredicted RBP11.84□□□□□ -0.51
HIF1A-203ENST00000394997 MPHOSPH8Q99549 860 aa11.84□□□□□ -0.51
HIF1A-203ENST00000394997 KCNJ14Q9UNX9 436 aa11.84□□□□□ -0.51
HIF1A-203ENST00000394997 FAM205AQ6ZU69 1335 aa11.83□□□□□ -0.51
HIF1A-203ENST00000394997 IGHMBP2P38935 993 aaKnown RBP11.83□□□□□ -0.52
HIF1A-203ENST00000394997 TMTC3Q6ZXV5 915 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 FILIP1Q7Z7B0 1213 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 HOMER1Q86YM7 354 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 GTPBP4Q9BZE4 634 aaKnown RBP11.83□□□□□ -0.52
HIF1A-203ENST00000394997 IKBKBO14920 756 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 GYS1P13807 737 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 PBX1P40424 430 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 DMTNQ08495 405 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms