RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 SPTLC3Q9NUV7 552 aa21.48■■□□□ 1.03
SIL1-202ENST00000394817 USP17L12C9JPN9 530 aa21.47■■□□□ 1.03
SIL1-202ENST00000394817 USP17L21D6R901 530 aa21.47■■□□□ 1.03
SIL1-202ENST00000394817 ORC4O43929 436 aa21.47■■□□□ 1.03
SIL1-202ENST00000394817 ERCC4Q92889 916 aaPredicted RBP21.47■■□□□ 1.03
SIL1-202ENST00000394817 AATFQ9NY61 560 aaKnown RBP eCLIP21.47■■□□□ 1.03
SIL1-202ENST00000394817 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.47■■□□□ 1.03
SIL1-202ENST00000394817 BECN2A8MW95 431 aa21.47■■□□□ 1.03
SIL1-202ENST00000394817 BTBD18B2RXH4 712 aa21.47■■□□□ 1.03
SIL1-202ENST00000394817 CUTAO60888 179 aa21.47■■□□□ 1.03
SIL1-202ENST00000394817 SLC3A2P08195 630 aaKnown RBP21.47■■□□□ 1.03
SIL1-202ENST00000394817 NOLC1Q14978 699 aaKnown RBP eCLIP21.47■■□□□ 1.03
SIL1-202ENST00000394817 IFIT1BQ5T764 474 aaKnown RBP21.47■■□□□ 1.03
SIL1-202ENST00000394817 RESP18Q5W5W9 173 aa21.47■■□□□ 1.03
SIL1-202ENST00000394817 SHC4Q6S5L8 630 aa21.47■■□□□ 1.03
SIL1-202ENST00000394817 BPIFA3Q9BQP9 254 aa21.47■■□□□ 1.03
SIL1-202ENST00000394817 TAOK2Q9UL54 1235 aa21.47■■□□□ 1.03
SIL1-202ENST00000394817 NAV1Q8NEY1 1877 aa21.47■■□□□ 1.03
SIL1-202ENST00000394817 RGPD3A6NKT7 1758 aaPredicted RBP21.46■■□□□ 1.03
SIL1-202ENST00000394817 RGPD4Q7Z3J3 1758 aa21.46■■□□□ 1.03
SIL1-202ENST00000394817 A0A087WWV3 80 aa21.46■■□□□ 1.03
SIL1-202ENST00000394817 SYKP43405 635 aa21.46■■□□□ 1.03
SIL1-202ENST00000394817 SBK1Q52WX2 424 aa21.46■■□□□ 1.03
SIL1-202ENST00000394817 SPTY2D1Q68D10 685 aaPredicted RBP21.46■■□□□ 1.03
SIL1-202ENST00000394817 KIAA1524Q8TCG1 905 aa21.46■■□□□ 1.03
SIL1-202ENST00000394817 ARPP21Q9UBL0 812 aaPredicted RBP21.46■■□□□ 1.03
SIL1-202ENST00000394817 KCNJ14Q9UNX9 436 aa21.46■■□□□ 1.03
SIL1-202ENST00000394817 LEMD3Q9Y2U8 911 aa21.46■■□□□ 1.03
SIL1-202ENST00000394817 ANKRD31Q8N7Z5 1873 aa21.46■■□□□ 1.03
SIL1-202ENST00000394817 CRY2Q49AN0 593 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 CATIPQ7Z7H3 387 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 CMTR1Q8N1G2 835 aaKnown RBP21.45■■□□□ 1.02
SIL1-202ENST00000394817 RPGRQ92834 1020 aaKnown RBP21.45■■□□□ 1.02
SIL1-202ENST00000394817 MRFAP1L1Q96HT8 127 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 RBM28Q9NW13 759 aaKnown RBP21.45■■□□□ 1.02
SIL1-202ENST00000394817 R3HCC1Q9Y3T6 440 aaKnown RBP21.45■■□□□ 1.02
SIL1-202ENST00000394817 CDK5RAP2Q96SN8 1893 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 PRDM1O75626 825 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 DDAH1O94760 285 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 CALM1P0DP23 149 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 CALM2P0DP24 149 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 CALM3P0DP25 149 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 PTGS1P23219 599 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 TOB1P50616 345 aaPredicted RBP21.45■■□□□ 1.02
SIL1-202ENST00000394817 FUT2Q10981 343 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 ZRSR1Q15695 479 aaKnown RBP21.45■■□□□ 1.02
SIL1-202ENST00000394817 RILPL1Q5EBL4 403 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 CCDC82Q8N4S0 544 aa21.45■■□□□ 1.02
SIL1-202ENST00000394817 XDHP47989 1333 aa21.44■■□□□ 1.02
SIL1-202ENST00000394817 TROAPQ12815 778 aa21.44■■□□□ 1.02
SIL1-202ENST00000394817 DPCR1Q3MIW9 517 aa21.44■■□□□ 1.02
SIL1-202ENST00000394817 DZIP1Q86YF9 867 aaKnown RBP21.44■■□□□ 1.02
SIL1-202ENST00000394817 AOPEPQ8N6M6 819 aa21.44■■□□□ 1.02
SIL1-202ENST00000394817 DRC7Q8IY82 874 aa21.43■■□□□ 1.02
SIL1-202ENST00000394817 ANKIB1Q9P2G1 1089 aa21.43■■□□□ 1.02
SIL1-202ENST00000394817 CLIP2Q9UDT6 1046 aa21.43■■□□□ 1.02
SIL1-202ENST00000394817 PYCARDQ9ULZ3 195 aa21.43■■□□□ 1.02
SIL1-202ENST00000394817 NLRP12P59046 1061 aa21.43■■□□□ 1.02
SIL1-202ENST00000394817 CCDC186Q7Z3E2 898 aa21.43■■□□□ 1.02
SIL1-202ENST00000394817 KRI1Q8N9T8 703 aaKnown RBP21.43■■□□□ 1.02
SIL1-202ENST00000394817 WDR66Q8TBY9 1149 aa21.43■■□□□ 1.02
SIL1-202ENST00000394817 NRXN2Q9P2S2 1712 aa21.42■■□□□ 1.02
SIL1-202ENST00000394817 PRPF3O43395 683 aaKnown RBP21.42■■□□□ 1.02
SIL1-202ENST00000394817 XBP1P17861 261 aa21.42■■□□□ 1.02
SIL1-202ENST00000394817 HMGB2P26583 209 aaKnown RBP21.42■■□□□ 1.02
SIL1-202ENST00000394817 AKAP17AQ02040 695 aaKnown RBP21.42■■□□□ 1.02
SIL1-202ENST00000394817 PKN1Q16512 942 aa21.42■■□□□ 1.02
SIL1-202ENST00000394817 C15orf52Q6ZUT6 534 aaKnown RBP21.42■■□□□ 1.02
SIL1-202ENST00000394817 CLIC6Q96NY7 704 aa21.42■■□□□ 1.02
SIL1-202ENST00000394817 TUBE1Q9UJT0 475 aa21.42■■□□□ 1.02
SIL1-202ENST00000394817 EVX2Q03828 476 aa21.41■■□□□ 1.02
SIL1-202ENST00000394817 NR5A1Q13285 461 aa21.41■■□□□ 1.02
SIL1-202ENST00000394817 C17orf53Q8N3J3 647 aaPredicted RBP21.41■■□□□ 1.02
SIL1-202ENST00000394817 NT5C2P49902 561 aa21.41■■□□□ 1.02
SIL1-202ENST00000394817 SHISA4Q96DD7 197 aa21.41■■□□□ 1.02
SIL1-202ENST00000394817 NRBP1Q9UHY1 535 aa21.41■■□□□ 1.02
SIL1-202ENST00000394817 JAG2Q9Y219 1238 aa21.41■■□□□ 1.02
SIL1-202ENST00000394817 MORC2Q9Y6X9 1032 aaPredicted RBP21.41■■□□□ 1.02
SIL1-202ENST00000394817 PLEKHA8P1O95397 391 aa21.4■■□□□ 1.02
SIL1-202ENST00000394817 LDHBP07195 334 aaKnown RBP21.4■■□□□ 1.02
SIL1-202ENST00000394817 PTPREP23469 700 aa21.4■■□□□ 1.02
SIL1-202ENST00000394817 PDE4BQ07343 736 aa21.4■■□□□ 1.02
SIL1-202ENST00000394817 TMTC3Q6ZXV5 915 aa21.4■■□□□ 1.02
SIL1-202ENST00000394817 ZNF804AQ7Z570 1209 aa21.4■■□□□ 1.02
SIL1-202ENST00000394817 GPR101Q96P66 508 aaPredicted RBP21.4■■□□□ 1.02
SIL1-202ENST00000394817 PHF20Q9BVI0 1012 aa21.4■■□□□ 1.02
SIL1-202ENST00000394817 FBXO2Q9UK22 296 aaPredicted RBP21.4■■□□□ 1.02
SIL1-202ENST00000394817 LRRC37AA6NMS7 1700 aa21.4■■□□□ 1.02
SIL1-202ENST00000394817 ROBO3Q96MS0 1386 aa21.4■■□□□ 1.02
SIL1-202ENST00000394817 DDX60LQ5H9U9 1706 aaKnown RBP21.39■■□□□ 1.02
SIL1-202ENST00000394817 MSL1Q68DK7 614 aa21.39■■□□□ 1.02
SIL1-202ENST00000394817 ELOA2Q8IYF1 753 aaPredicted RBP21.39■■□□□ 1.02
SIL1-202ENST00000394817 NLGN1Q8N2Q7 840 aa21.39■■□□□ 1.02
SIL1-202ENST00000394817 OXER1Q8TDS5 423 aa21.39■■□□□ 1.02
SIL1-202ENST00000394817 RBM17Q96I25 401 aaKnown RBP21.39■■□□□ 1.02
SIL1-202ENST00000394817 MKRN1Q9UHC7 482 aaKnown RBP21.39■■□□□ 1.02
SIL1-202ENST00000394817 KCNH3Q9ULD8 1083 aa21.39■■□□□ 1.02
SIL1-202ENST00000394817 CNTNAP5Q8WYK1 1306 aa21.39■■□□□ 1.01
SIL1-202ENST00000394817 CYP2D6P10635 497 aa21.39■■□□□ 1.01
SIL1-202ENST00000394817 GPSM2P81274 684 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms