RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 FAM217BQ9NTX9 383 aaPredicted RBP11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 ZSWIM5Q9P217 1185 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 TRIM75PA6NK02 468 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 BTBD18B2RXH4 712 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 ERVV-1B6SEH8 477 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 PCP11498 1178 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 RXRAP19793 462 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 TDO2P48775 406 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 RSRC2Q7L4I2 434 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 CRACR2BQ8N4Y2 399 aaPredicted RBP11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 MSL3Q8N5Y2 521 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 CCDC12Q8WUD4 166 aaPredicted RBP11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 GSDMAQ96QA5 445 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 UBAC1Q9BSL1 405 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 GBP3Q9H0R5 595 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 GREM2Q9H772 168 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 MYO1AQ9UBC5 1043 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 SERTAD1Q9UHV2 236 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 TTF2Q9UNY4 1162 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 ITIH6Q6UXX5 1313 aa11.44□□□□□ -0.58
UBE2D3-208ENST00000394803 COL22A1Q8NFW1 1626 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 EIF3JO75822 258 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 MBD4O95243 580 aa11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 CALM1P0DP23 149 aa11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 CALM2P0DP24 149 aa11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 CALM3P0DP25 149 aa11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 TXLNAP40222 546 aa11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 PLA2G4AP47712 749 aa11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 CC2D1AQ6P1N0 951 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 FOXP4Q8IVH2 680 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 INTS13Q9NVM9 706 aa11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 RBM28Q9NW13 759 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 TRMT112Q9UI30 125 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 SYNRGQ9UMZ2 1314 aa11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 ACTN4O43707 911 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 PDE4BQ07343 736 aa11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 ESR2Q92731 530 aa11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 CCDC85AQ96PX6 553 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 ACBD3Q9H3P7 528 aa11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 CWC15Q9P013 229 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 WWC3Q9ULE0 1092 aa11.43□□□□□ -0.58
UBE2D3-208ENST00000394803 XIRP1Q702N8 1843 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-208ENST00000394803 FGFR2P21802 821 aa11.42□□□□□ -0.58
UBE2D3-208ENST00000394803 KRT2P35908 639 aa11.42□□□□□ -0.58
UBE2D3-208ENST00000394803 PHKA1P46020 1223 aa11.42□□□□□ -0.58
UBE2D3-208ENST00000394803 TOB1P50616 345 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-208ENST00000394803 SRGAP1Q7Z6B7 1085 aa11.42□□□□□ -0.58
UBE2D3-208ENST00000394803 MAGEB6Q8N7X4 407 aa11.42□□□□□ -0.58
UBE2D3-208ENST00000394803 FANCBQ8NB91 859 aa11.42□□□□□ -0.58
UBE2D3-208ENST00000394803 HNRNPLLQ8WVV9 542 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-208ENST00000394803 KIFC2Q96AC6 838 aa11.42□□□□□ -0.58
UBE2D3-208ENST00000394803 TOMM22Q9NS69 142 aa11.42□□□□□ -0.58
UBE2D3-208ENST00000394803 BMP6P22004 513 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 TMTC1Q8IUR5 882 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 DNAJC10Q8IXB1 793 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 ZNF654Q8IZM8 581 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 UBXN6Q9BZV1 441 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 STRN4Q9NRL3 753 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 PSD3Q9NYI0 1048 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 TOGARAM1Q9Y4F4 1720 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 BCORQ6W2J9 1755 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 GSG1L2A8MUP6 293 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 ADKP55263 362 aaKnown RBP11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 CHMP4BP1P59074 171 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 PIP4K2BP78356 416 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 FMR1Q06787 632 aaKnown RBP eCLIP11.41□□□□□ -0.581e-7■□□□□ 9.5
UBE2D3-208ENST00000394803 SEMA3FQ13275 785 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 TOGARAM2Q6ZUX3 1019 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 FAM177A1Q8N128 213 aaPredicted RBP11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 IGSF22Q8N9C0 903 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 LRRN4CLQ8ND94 238 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 SYTL4Q96C24 671 aaPredicted RBP11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 MYL10Q9BUA6 226 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 EPB41L4AQ9HCS5 686 aaPredicted RBP11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 RMND1Q9NWS8 449 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 CDC23Q9UJX2 597 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 SLC4A4Q9Y6R1 1079 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 MYH6P13533 1939 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 PLCH1Q4KWH8 1693 aa11.41□□□□□ -0.58
UBE2D3-208ENST00000394803 CTAGE9A4FU28 777 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 MCM3P25205 808 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 EVA1CP58658 441 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 CTDSPL2Q05D32 466 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 SMC1AQ14683 1233 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 DDX17Q92841 729 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 WDR24Q96S15 920 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 CSRNP2Q9H175 543 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 ANAPC4Q9UJX5 808 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 MFAP3LO75121 409 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 TBC1D8O95759 1140 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 PRR29P0C7W0 189 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 FECHP22830 423 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 TRAPPC10P48553 1259 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 NT5C2P49902 561 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 WHAMMP3Q1A5X7 153 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 MUM1L1Q5H9M0 696 aa11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 RRP12Q5JTH9 1297 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-208ENST00000394803 CDKAL1Q5VV42 579 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms