RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 TERF1P54274 439 aa16.92■□□□□ 0.3
CDH16-202ENST00000394055 PNOCQ13519 176 aa16.92■□□□□ 0.3
CDH16-202ENST00000394055 FILIP1Q7Z7B0 1213 aa16.92■□□□□ 0.3
CDH16-202ENST00000394055 IQCA1Q86XH1 822 aa16.92■□□□□ 0.3
CDH16-202ENST00000394055 SHISA4Q96DD7 197 aa16.92■□□□□ 0.3
CDH16-202ENST00000394055 MTA3Q9BTC8 594 aa16.92■□□□□ 0.3
CDH16-202ENST00000394055 DCP1AQ9NPI6 582 aaPredicted RBP16.92■□□□□ 0.3
CDH16-202ENST00000394055 PCDHB6Q9Y5E3 794 aa16.92■□□□□ 0.3
CDH16-202ENST00000394055 FAM205CA6NFA0 338 aa16.92■□□□□ 0.3
CDH16-202ENST00000394055 AKAP17AQ02040 695 aaKnown RBP16.92■□□□□ 0.3
CDH16-202ENST00000394055 UTP14CQ5TAP6 766 aaKnown RBP16.92■□□□□ 0.3
CDH16-202ENST00000394055 RESP18Q5W5W9 173 aa16.92■□□□□ 0.3
CDH16-202ENST00000394055 CATIPQ7Z7H3 387 aa16.92■□□□□ 0.3
CDH16-202ENST00000394055 CRNKL1Q9BZJ0 848 aaKnown RBP16.92■□□□□ 0.3
CDH16-202ENST00000394055 NLRP12P59046 1061 aa16.91■□□□□ 0.3
CDH16-202ENST00000394055 NFIXQ14938 502 aa16.91■□□□□ 0.3
CDH16-202ENST00000394055 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
CDH16-202ENST00000394055 IPO4Q8TEX9 1081 aaKnown RBP16.91■□□□□ 0.3
CDH16-202ENST00000394055 RGL2O15211 777 aa16.91■□□□□ 0.3
CDH16-202ENST00000394055 CUTAO60888 179 aa16.91■□□□□ 0.3
CDH16-202ENST00000394055 LONRF3Q496Y0 759 aa16.91■□□□□ 0.3
CDH16-202ENST00000394055 DZIP1Q86YF9 867 aaKnown RBP16.91■□□□□ 0.3
CDH16-202ENST00000394055 KRI1Q8N9T8 703 aaKnown RBP16.91■□□□□ 0.3
CDH16-202ENST00000394055 MRFAP1L1Q96HT8 127 aa16.91■□□□□ 0.3
CDH16-202ENST00000394055 CABP5Q9NP86 173 aa16.91■□□□□ 0.3
CDH16-202ENST00000394055 V9GY48 417 aaPredicted RBP16.91■□□□□ 0.3
CDH16-202ENST00000394055 TNRC6CQ9HCJ0 1690 aaKnown RBP16.91■□□□□ 0.3
CDH16-202ENST00000394055 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
CDH16-202ENST00000394055 CDC25BP30305 580 aa16.9■□□□□ 0.3
CDH16-202ENST00000394055 FOXP1Q9H334 677 aaPredicted RBP16.9■□□□□ 0.3
CDH16-202ENST00000394055 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.9■□□□□ 0.3
CDH16-202ENST00000394055 KCNH3Q9ULD8 1083 aa16.9■□□□□ 0.3
CDH16-202ENST00000394055 DMTNQ08495 405 aa16.9■□□□□ 0.3
CDH16-202ENST00000394055 FOXN1O15353 648 aa16.89■□□□□ 0.29
CDH16-202ENST00000394055 PKN1Q16512 942 aa16.89■□□□□ 0.29
CDH16-202ENST00000394055 MEX3CQ5U5Q3 659 aaKnown RBP16.89■□□□□ 0.29
CDH16-202ENST00000394055 CNNM3Q8NE01 707 aa16.89■□□□□ 0.29
CDH16-202ENST00000394055 RNF26Q9BY78 433 aaPredicted RBP16.89■□□□□ 0.29
CDH16-202ENST00000394055 BAZ2BQ9UIF8 2168 aaKnown RBP16.89■□□□□ 0.29
CDH16-202ENST00000394055 USP17L8P0C7I0 530 aa16.89■□□□□ 0.29
CDH16-202ENST00000394055 RCAN1P53805 252 aa16.89■□□□□ 0.29
CDH16-202ENST00000394055 METTL16Q86W50 562 aaKnown RBP16.89■□□□□ 0.29
CDH16-202ENST00000394055 CNBD1Q8NA66 436 aa16.89■□□□□ 0.29
CDH16-202ENST00000394055 MCM9Q9NXL9 1143 aa16.89■□□□□ 0.29
CDH16-202ENST00000394055 NHSQ6T4R5 1651 aa16.89■□□□□ 0.29
CDH16-202ENST00000394055 SMC2O95347 1197 aa16.88■□□□□ 0.29
CDH16-202ENST00000394055 RBM6P78332 1123 aaKnown RBP16.88■□□□□ 0.29
CDH16-202ENST00000394055 TROAPQ12815 778 aa16.88■□□□□ 0.29
CDH16-202ENST00000394055 RILPL1Q5EBL4 403 aa16.88■□□□□ 0.29
CDH16-202ENST00000394055 TIGD1Q96MW7 591 aa16.88■□□□□ 0.29
CDH16-202ENST00000394055 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
CDH16-202ENST00000394055 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDH16-202ENST00000394055 FUT2Q10981 343 aa16.88■□□□□ 0.29
CDH16-202ENST00000394055 DIXDC1Q155Q3 683 aa16.88■□□□□ 0.29
CDH16-202ENST00000394055 GRIK5Q16478 980 aa16.88■□□□□ 0.29
CDH16-202ENST00000394055 EARS2Q5JPH6 523 aaKnown RBP16.88■□□□□ 0.29
CDH16-202ENST00000394055 MTERF4Q7Z6M4 381 aaKnown RBP16.88■□□□□ 0.29
CDH16-202ENST00000394055 FBXO2Q9UK22 296 aaPredicted RBP16.88■□□□□ 0.29
CDH16-202ENST00000394055 EP400Q96L91 3159 aa16.88■□□□□ 0.29
CDH16-202ENST00000394055 LMOD1P29536 600 aaPredicted RBP16.88■□□□□ 0.29
CDH16-202ENST00000394055 KRBA2Q6ZNG9 492 aa16.88■□□□□ 0.29
CDH16-202ENST00000394055 PDILTQ8N807 584 aa16.88■□□□□ 0.29
CDH16-202ENST00000394055 GJD4Q96KN9 370 aaPredicted RBP16.88■□□□□ 0.29
CDH16-202ENST00000394055 IFNKQ9P0W0 207 aa16.88■□□□□ 0.29
CDH16-202ENST00000394055 MYH6P13533 1939 aa16.87■□□□□ 0.29
CDH16-202ENST00000394055 FGRP09769 529 aa16.87■□□□□ 0.29
CDH16-202ENST00000394055 NOM1Q5C9Z4 860 aaKnown RBP16.87■□□□□ 0.29
CDH16-202ENST00000394055 TSC1Q92574 1164 aa16.87■□□□□ 0.29
CDH16-202ENST00000394055 IRS2Q9Y4H2 1338 aa16.87■□□□□ 0.29
CDH16-202ENST00000394055 TSPY2A6NKD2 308 aa16.87■□□□□ 0.29
CDH16-202ENST00000394055 GRAPQ13588 217 aa16.87■□□□□ 0.29
CDH16-202ENST00000394055 NCAPHQ15003 741 aa16.87■□□□□ 0.29
CDH16-202ENST00000394055 USP49Q70CQ1 688 aa16.87■□□□□ 0.29
CDH16-202ENST00000394055 FOXP4Q8IVH2 680 aaPredicted RBP16.87■□□□□ 0.29
CDH16-202ENST00000394055 LRRC8AQ8IWT6 810 aa16.87■□□□□ 0.29
CDH16-202ENST00000394055 GRAPLQ8TC17 118 aaPredicted RBP16.87■□□□□ 0.29
CDH16-202ENST00000394055 C16orf45Q96MC5 204 aaPredicted RBP16.87■□□□□ 0.29
CDH16-202ENST00000394055 XPO4Q9C0E2 1151 aaKnown RBP16.87■□□□□ 0.29
CDH16-202ENST00000394055 ATP8A2Q9NTI2 1148 aa16.87■□□□□ 0.29
CDH16-202ENST00000394055 TUBE1Q9UJT0 475 aa16.87■□□□□ 0.29
CDH16-202ENST00000394055 THSD7AQ9UPZ6 1657 aa16.86■□□□□ 0.29
CDH16-202ENST00000394055 PDS5AQ29RF7 1337 aaKnown RBP16.86■□□□□ 0.29
CDH16-202ENST00000394055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.86■□□□□ 0.29
CDH16-202ENST00000394055 FAM237AA0A1B0GTK4 181 aa16.86■□□□□ 0.29
CDH16-202ENST00000394055 PTPREP23469 700 aa16.86■□□□□ 0.29
CDH16-202ENST00000394055 BPIFA3Q9BQP9 254 aa16.86■□□□□ 0.29
CDH16-202ENST00000394055 PCDHA5Q9Y5H7 936 aa16.86■□□□□ 0.29
CDH16-202ENST00000394055 POLR2DO15514 142 aaKnown RBP16.86■□□□□ 0.29
CDH16-202ENST00000394055 LDHBP07195 334 aaKnown RBP16.86■□□□□ 0.29
CDH16-202ENST00000394055 XBP1P17861 261 aa16.86■□□□□ 0.29
CDH16-202ENST00000394055 GRAMD1CQ8IYS0 662 aa16.86■□□□□ 0.29
CDH16-202ENST00000394055 DYNLL2Q96FJ2 89 aa16.86■□□□□ 0.29
CDH16-202ENST00000394055 ARPP21Q9UBL0 812 aaPredicted RBP16.86■□□□□ 0.29
CDH16-202ENST00000394055 TAF1LQ8IZX4 1826 aa16.85■□□□□ 0.29
CDH16-202ENST00000394055 PRPF3O43395 683 aaKnown RBP16.85■□□□□ 0.29
CDH16-202ENST00000394055 ORC4O43929 436 aa16.85■□□□□ 0.29
CDH16-202ENST00000394055 ATP1A3P13637 1013 aa16.85■□□□□ 0.29
CDH16-202ENST00000394055 USP5P45974 858 aa16.85■□□□□ 0.29
CDH16-202ENST00000394055 PAXIP1Q6ZW49 1069 aaPredicted RBP16.85■□□□□ 0.29
CDH16-202ENST00000394055 TMTC3Q6ZXV5 915 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms