RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 ABCC12Q96J65 1359 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 PDE4BQ07343 736 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 VWA3BQ502W6 1294 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 ALS2CLQ60I27 953 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 OTUD7BQ6GQQ9 843 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 ZFP91Q96JP5 570 aaPredicted RBP9.66□□□□□ -0.86
GABRA1-202ENST00000393943 YY1AP1Q9H869 796 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 EPN1Q9Y6I3 576 aaPredicted RBP9.66□□□□□ -0.86
GABRA1-202ENST00000393943 OVOS2A0A0J9YW53 1432 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 OVOS2Q6IE36 1432 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 STK36Q9NRP7 1315 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 MINDY4BA8MYZ0 360 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 MYL1P05976 194 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 SLC8A1P32418 973 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 CFAP221Q4G0U5 840 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 SPECC1Q5M775 1068 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 TADA2BQ86TJ2 420 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 PLCD3Q8N3E9 789 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 MAGEF1Q9HAY2 307 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 LGR6Q9HBX8 967 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 SEC63Q9UGP8 760 aaKnown RBP9.66□□□□□ -0.86
GABRA1-202ENST00000393943 RASAL2Q9UJF2 1139 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 CD163L1Q9NR16 1453 aa9.66□□□□□ -0.86
GABRA1-202ENST00000393943 CCT6AP40227 531 aaKnown RBP9.65□□□□□ -0.86
GABRA1-202ENST00000393943 RPAINQ86UA6 219 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 STK11IPQ8N1F8 1099 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 DYDC1Q8WWB3 177 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 NOX5Q96PH1 765 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 DESI2Q9BSY9 194 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 SLC52A2Q9HAB3 445 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 TARSL2A2RTX5 802 aaKnown RBP9.65□□□□□ -0.86
GABRA1-202ENST00000393943 RANBP6O60518 1105 aaKnown RBP9.65□□□□□ -0.86
GABRA1-202ENST00000393943 EPHB4P54760 987 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 TBC1D8BQ0IIM8 1120 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 SLC35F6Q8N357 371 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 MSL3Q8N5Y2 521 aaKnown RBP9.65□□□□□ -0.86
GABRA1-202ENST00000393943 BCAS4Q8TDM0 211 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 SLF1Q9BQI6 1058 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 CABP5Q9NP86 173 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 HYOU1Q9Y4L1 999 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 CLTCQ00610 1675 aaKnown RBP9.65□□□□□ -0.86
GABRA1-202ENST00000393943 ANO9A1A5B4 782 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 GTPBP6O43824 516 aaPredicted RBP9.65□□□□□ -0.86
GABRA1-202ENST00000393943 EEF1GP26641 437 aaKnown RBP9.65□□□□□ -0.86
GABRA1-202ENST00000393943 CAVIN4Q5BKX8 364 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 CCDC170Q8IYT3 715 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 ENGASEQ8NFI3 743 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 MTA3Q9BTC8 594 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 FEZ2Q9UHY8 353 aaPredicted RBP9.65□□□□□ -0.86
GABRA1-202ENST00000393943 TUBE1Q9UJT0 475 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 FHOD1Q9Y613 1164 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 PALLDQ8WX93 1383 aa9.65□□□□□ -0.86
GABRA1-202ENST00000393943 ITSN1Q15811 1721 aa9.65□□□□□ -0.87
GABRA1-202ENST00000393943 MATR3P43243 847 aaKnown RBP eCLIP9.65□□□□□ -0.87
GABRA1-202ENST00000393943 CCDC40Q4G0X9 1142 aa9.65□□□□□ -0.87
GABRA1-202ENST00000393943 DTHD1Q6ZMT9 781 aa9.65□□□□□ -0.87
GABRA1-202ENST00000393943 SND1Q7KZF4 910 aaKnown RBP eCLIP9.65□□□□□ -0.87
GABRA1-202ENST00000393943 CCDC82Q8N4S0 544 aa9.65□□□□□ -0.87
GABRA1-202ENST00000393943 SYTL4Q96C24 671 aaPredicted RBP9.65□□□□□ -0.87
GABRA1-202ENST00000393943 VPS16Q9H269 839 aa9.65□□□□□ -0.87
GABRA1-202ENST00000393943 NUTM2BA6NNL0 878 aaPredicted RBP9.64□□□□□ -0.87
GABRA1-202ENST00000393943 NUTM2EB1AL46 878 aaPredicted RBP9.64□□□□□ -0.87
GABRA1-202ENST00000393943 TRAPPC10P48553 1259 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 RCAN1P53805 252 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 GNGT1P63211 74 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 ERCC6L2Q5T890 1561 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 CNNM4Q6P4Q7 775 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 TMED8Q6PL24 325 aaPredicted RBP9.64□□□□□ -0.87
GABRA1-202ENST00000393943 CABS1Q96KC9 395 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 MAN1B1Q9UKM7 699 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 PRR36Q9H6K5 1346 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 TMCO5BA8MYB1 307 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 EIF3CLB5ME19 914 aaKnown RBP9.64□□□□□ -0.87
GABRA1-202ENST00000393943 ZEB2O60315 1214 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 MFAP3LO75121 409 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 TTC38Q5R3I4 469 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 CCDC26Q8TAB7 109 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 EIF3CQ99613 913 aaKnown RBP9.64□□□□□ -0.87
GABRA1-202ENST00000393943 SLC4A4Q9Y6R1 1079 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 KCNJ18B7U540 433 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 PATL2C9JE40 543 aaKnown RBP9.64□□□□□ -0.87
GABRA1-202ENST00000393943 MORC3Q14149 939 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 KCNJ12Q14500 433 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 PPP2R5EQ16537 467 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 EMBQ6PCB8 327 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 NELFBQ8WX92 580 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 XAGE2Q96GT9 111 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 NAP1L3Q99457 506 aaPredicted RBP9.64□□□□□ -0.87
GABRA1-202ENST00000393943 ABCB6Q9NP58 842 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.64□□□□□ -0.87
GABRA1-202ENST00000393943 B4E1Z4 1266 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 PCP11498 1178 aaKnown RBP9.64□□□□□ -0.87
GABRA1-202ENST00000393943 TIMM10P62072 90 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 UBE3CQ15386 1083 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 CPLX4Q7Z7G2 160 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 ZBTB3Q9H5J0 574 aa9.64□□□□□ -0.87
GABRA1-202ENST00000393943 ACTR5Q9H9F9 607 aaPredicted RBP9.64□□□□□ -0.87
GABRA1-202ENST00000393943 MAST3O60307 1309 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 AP5Z1O43299 807 aa9.63□□□□□ -0.87
GABRA1-202ENST00000393943 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms