RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 ALG1Q9BT22 464 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 LTBP4Q8N2S1 1624 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 CYP7A1P22680 504 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 AKNAD1Q5T1N1 836 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 MYSM1Q5VVJ2 828 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 TBC1D9BQ66K14 1250 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 CLEC4GQ6UXB4 293 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 SYNE3Q6ZMZ3 975 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 C10orf67Q8IYJ2 551 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 SDR42E1Q8WUS8 393 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 RABGGTAQ92696 567 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 CCDC34Q96HJ3 373 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 TMEM87BQ96K49 555 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 RAI14Q9P0K7 980 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 ARAP2Q8WZ64 1704 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 VWA3AA6NCI4 1184 aa17.17■□□□□ 0.34
SHTN1-204ENST00000392903 TRIM66O15016 1216 aa17.17■□□□□ 0.34
SHTN1-204ENST00000392903 JAKMIP3Q5VZ66 844 aa17.17■□□□□ 0.34
SHTN1-204ENST00000392903 SMIM22K7EJ46 135 aa17.17■□□□□ 0.34
SHTN1-204ENST00000392903 KIF23Q02241 960 aaPredicted RBP17.17■□□□□ 0.34
SHTN1-204ENST00000392903 VPS37DQ86XT2 251 aa17.17■□□□□ 0.34
SHTN1-204ENST00000392903 CCDC82Q8N4S0 544 aa17.17■□□□□ 0.34
SHTN1-204ENST00000392903 CELF1Q92879 486 aaKnown RBP17.17■□□□□ 0.34
SHTN1-204ENST00000392903 NACAP1Q9BZK3 213 aa17.17■□□□□ 0.34
SHTN1-204ENST00000392903 EPC1Q9H2F5 836 aa17.17■□□□□ 0.34
SHTN1-204ENST00000392903 SRP68Q9UHB9 627 aaKnown RBP17.17■□□□□ 0.34
SHTN1-204ENST00000392903 SLC12A7Q9Y666 1083 aa17.17■□□□□ 0.34
SHTN1-204ENST00000392903 GOLGA6L9A6NEM1 432 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 GOLGA8AA7E2F4 631 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 MINDY4BA8MYZ0 360 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 CBFA2T2O43439 604 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 SLC3A2P08195 630 aaKnown RBP17.16■□□□□ 0.34
SHTN1-204ENST00000392903 ACTN2P35609 894 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 RTL9Q8NET4 1388 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 PARD6BQ9BYG5 372 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 HSD3B7Q9H2F3 369 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 YY1AP1Q9H869 796 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 FAM217BQ9NTX9 383 aaPredicted RBP17.16■□□□□ 0.34
SHTN1-204ENST00000392903 MRFAP1Q9Y605 127 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 LMOD1P29536 600 aaPredicted RBP17.16■□□□□ 0.34
SHTN1-204ENST00000392903 IARSP41252 1262 aaKnown RBP17.16■□□□□ 0.34
SHTN1-204ENST00000392903 PPP2R3AQ06190 1150 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 KRT40Q6A162 431 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 MINPP1Q9UNW1 487 aa17.16■□□□□ 0.34
SHTN1-204ENST00000392903 RRP15Q9Y3B9 282 aaKnown RBP17.16■□□□□ 0.34
SHTN1-204ENST00000392903 DOCK2Q92608 1830 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 SPTLC2O15270 562 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 ARHGAP6O43182 974 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 RANBP6O60518 1105 aaKnown RBP17.15■□□□□ 0.34
SHTN1-204ENST00000392903 TOM1O60784 492 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 NTRK3Q16288 839 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 CPLX2Q6PUV4 134 aaKnown RBP17.15■□□□□ 0.34
SHTN1-204ENST00000392903 BRAPQ7Z569 592 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 CMTR1Q8N1G2 835 aaKnown RBP17.15■□□□□ 0.34
SHTN1-204ENST00000392903 PPP2R2CQ9Y2T4 447 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 C4AP0C0L4 1744 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 C4BP0C0L5 1744 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 CCDC151A5D8V7 595 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 MAP2K7O14733 419 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 CDKL5O76039 1030 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 MARCKSP29966 332 aaPredicted RBP17.15■□□□□ 0.34
SHTN1-204ENST00000392903 LMAN1P49257 510 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 GNL2Q13823 731 aaKnown RBP17.15■□□□□ 0.34
SHTN1-204ENST00000392903 SGMS1Q86VZ5 419 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 KCNG4Q8TDN1 519 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 POLR3EQ9NVU0 708 aa17.15■□□□□ 0.34
SHTN1-204ENST00000392903 BSDC1Q9NW68 430 aaPredicted RBP17.15■□□□□ 0.34
SHTN1-204ENST00000392903 RREB1Q92766 1687 aa17.14■□□□□ 0.33
SHTN1-204ENST00000392903 ATP1A3P13637 1013 aa17.14■□□□□ 0.33
SHTN1-204ENST00000392903 SF3B3Q15393 1217 aaKnown RBP17.14■□□□□ 0.33
SHTN1-204ENST00000392903 TMEM139Q8IV31 216 aa17.14■□□□□ 0.33
SHTN1-204ENST00000392903 VSTM4Q8IW00 320 aa17.14■□□□□ 0.33
SHTN1-204ENST00000392903 SLC26A6Q9BXS9 759 aa17.14■□□□□ 0.33
SHTN1-204ENST00000392903 KRT23Q9C075 422 aa17.14■□□□□ 0.33
SHTN1-204ENST00000392903 CNNM2Q9H8M5 875 aa17.14■□□□□ 0.33
SHTN1-204ENST00000392903 CHD4Q14839 1912 aa17.14■□□□□ 0.33
SHTN1-204ENST00000392903 H3BQF6 201 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 BIN1O00499 593 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 YEATS4O95619 227 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 GNAT2P19087 354 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 KLRK1P26718 216 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 LIFRP42702 1097 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 UBASH3AP57075 661 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 BRD3Q15059 726 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 LONRF2Q1L5Z9 754 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 CAVIN4Q5BKX8 364 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 ANO1Q5XXA6 986 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 GNL3LQ9NVN8 582 aaKnown RBP17.13■□□□□ 0.33
SHTN1-204ENST00000392903 PNPLA7Q6ZV29 1317 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 IVLP07476 585 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 GOLGA1Q92805 767 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 FAM84BQ96KN1 310 aaPredicted RBP17.13■□□□□ 0.33
SHTN1-204ENST00000392903 WDR24Q96S15 920 aa17.13■□□□□ 0.33
SHTN1-204ENST00000392903 BCL9LQ86UU0 1499 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 MAGEB6P1A0A0J9YX57 407 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 GNPATO15228 680 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 ZNF202O95125 648 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 TXLNAP40222 546 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 GYS2P54840 703 aa17.12■□□□□ 0.33
SHTN1-204ENST00000392903 DYNLL1P63167 89 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms