RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ZNF804AQ7Z570 1209 aa29.54■■■□□ 2.32
SMARCD3-203ENST00000392811 PIBF1Q8WXW3 757 aa29.54■■■□□ 2.32
SMARCD3-203ENST00000392811 CLIC6Q96NY7 704 aa29.54■■■□□ 2.32
SMARCD3-203ENST00000392811 SERPINB2P05120 415 aa29.53■■■□□ 2.32
SMARCD3-203ENST00000392811 SYKP43405 635 aa29.53■■■□□ 2.32
SMARCD3-203ENST00000392811 GPSM2P81274 684 aa29.53■■■□□ 2.32
SMARCD3-203ENST00000392811 FBXW7Q969H0 707 aa29.53■■■□□ 2.32
SMARCD3-203ENST00000392811 FAM237AA0A1B0GTK4 181 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 CUTAO60888 179 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 PLEKHA8P1O95397 391 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 CALM1P0DP23 149 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 CALM2P0DP24 149 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 CALM3P0DP25 149 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 AKAP17AQ02040 695 aaKnown RBP29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 NR5A1Q13285 461 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 FAM47AQ5JRC9 791 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 RESP18Q5W5W9 173 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 C15orf52Q6ZUT6 534 aaKnown RBP29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 TIGD1Q96MW7 591 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 RBM28Q9NW13 759 aaKnown RBP29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 BECN2A8MW95 431 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 NMT2O60551 498 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 DDAH1O94760 285 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 ST5P78524 1137 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 PKN1Q16512 942 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 SARM1Q6SZW1 724 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 OXER1Q8TDS5 423 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 SHISA4Q96DD7 197 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 QTRT2Q9H974 415 aaKnown RBP29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 MCM9Q9NXL9 1143 aa29.52■■■□□ 2.32
SMARCD3-203ENST00000392811 GRIK5Q16478 980 aa29.51■■■□□ 2.31
SMARCD3-203ENST00000392811 SLC27A3Q5K4L6 730 aa29.51■■■□□ 2.31
SMARCD3-203ENST00000392811 NAT10Q9H0A0 1025 aaKnown RBP29.51■■■□□ 2.31
SMARCD3-203ENST00000392811 PRPF3O43395 683 aaKnown RBP29.5■■■□□ 2.31
SMARCD3-203ENST00000392811 IGSF3O75054 1194 aa29.5■■■□□ 2.31
SMARCD3-203ENST00000392811 USP17L8P0C7I0 530 aa29.5■■■□□ 2.31
SMARCD3-203ENST00000392811 RILPL1Q5EBL4 403 aa29.5■■■□□ 2.31
SMARCD3-203ENST00000392811 PDE4BQ07343 736 aa29.5■■■□□ 2.31
SMARCD3-203ENST00000392811 DRC7Q8IY82 874 aa29.5■■■□□ 2.31
SMARCD3-203ENST00000392811 PTGS1P23219 599 aa29.49■■■□□ 2.31
SMARCD3-203ENST00000392811 ZRSR1Q15695 479 aaKnown RBP29.49■■■□□ 2.31
SMARCD3-203ENST00000392811 DPCR1Q3MIW9 517 aa29.49■■■□□ 2.31
SMARCD3-203ENST00000392811 KRI1Q8N9T8 703 aaKnown RBP29.49■■■□□ 2.31
SMARCD3-203ENST00000392811 MKRN1Q9UHC7 482 aaKnown RBP29.49■■■□□ 2.31
SMARCD3-203ENST00000392811 DIXDC1Q155Q3 683 aa29.49■■■□□ 2.31
SMARCD3-203ENST00000392811 SLC4A8Q2Y0W8 1093 aa29.49■■■□□ 2.31
SMARCD3-203ENST00000392811 AOPEPQ8N6M6 819 aa29.49■■■□□ 2.31
SMARCD3-203ENST00000392811 SH3RF3Q8TEJ3 882 aaPredicted RBP29.49■■■□□ 2.31
SMARCD3-203ENST00000392811 VPS54Q9P1Q0 977 aa29.49■■■□□ 2.31
SMARCD3-203ENST00000392811 V9GY48 417 aaPredicted RBP29.49■■■□□ 2.31
SMARCD3-203ENST00000392811 hCG_1642624A0A1W2PR95 340 aa29.48■■■□□ 2.31
SMARCD3-203ENST00000392811 UFL1O94874 794 aa29.48■■■□□ 2.31
SMARCD3-203ENST00000392811 GSTO1P78417 241 aa29.48■■■□□ 2.31
SMARCD3-203ENST00000392811 TMTC3Q6ZXV5 915 aa29.48■■■□□ 2.31
SMARCD3-203ENST00000392811 C17orf53Q8N3J3 647 aaPredicted RBP29.48■■■□□ 2.31
SMARCD3-203ENST00000392811 RBM17Q96I25 401 aaKnown RBP29.48■■■□□ 2.31
SMARCD3-203ENST00000392811 XBP1P17861 261 aa29.47■■■□□ 2.31
SMARCD3-203ENST00000392811 USP5P45974 858 aa29.47■■■□□ 2.31
SMARCD3-203ENST00000392811 RBM6P78332 1123 aaKnown RBP29.47■■■□□ 2.31
SMARCD3-203ENST00000392811 NOLC1Q14978 699 aaKnown RBP eCLIP29.47■■■□□ 2.31
SMARCD3-203ENST00000392811 TSPY2A6NKD2 308 aa29.47■■■□□ 2.31
SMARCD3-203ENST00000392811 BIN1O00499 593 aa29.47■■■□□ 2.31
SMARCD3-203ENST00000392811 CDC25BP30305 580 aa29.47■■■□□ 2.31
SMARCD3-203ENST00000392811 C12orf60Q5U649 245 aa29.47■■■□□ 2.31
SMARCD3-203ENST00000392811 CCDC186Q7Z3E2 898 aa29.47■■■□□ 2.31
SMARCD3-203ENST00000392811 NRBP1Q9UHY1 535 aa29.47■■■□□ 2.31
SMARCD3-203ENST00000392811 PCDHB6Q9Y5E3 794 aa29.47■■■□□ 2.31
SMARCD3-203ENST00000392811 TRIM37O94972 964 aa29.46■■■□□ 2.31
SMARCD3-203ENST00000392811 ATP2B4P23634 1241 aa29.46■■■□□ 2.31
SMARCD3-203ENST00000392811 NLRP12P59046 1061 aa29.46■■■□□ 2.31
SMARCD3-203ENST00000392811 PHF20Q9BVI0 1012 aa29.46■■■□□ 2.31
SMARCD3-203ENST00000392811 PYCARDQ9ULZ3 195 aa29.46■■■□□ 2.31
SMARCD3-203ENST00000392811 R3HCC1Q9Y3T6 440 aaKnown RBP29.46■■■□□ 2.31
SMARCD3-203ENST00000392811 DDR1Q08345 913 aa29.45■■■□□ 2.31
SMARCD3-203ENST00000392811 ANO8Q9HCE9 1232 aaPredicted RBP29.45■■■□□ 2.31
SMARCD3-203ENST00000392811 CD209Q9NNX6 404 aa29.45■■■□□ 2.31
SMARCD3-203ENST00000392811 CABP5Q9NP86 173 aa29.45■■■□□ 2.31
SMARCD3-203ENST00000392811 CLIP2Q9UDT6 1046 aa29.45■■■□□ 2.31
SMARCD3-203ENST00000392811 FBXO2Q9UK22 296 aaPredicted RBP29.45■■■□□ 2.31
SMARCD3-203ENST00000392811 CTCFLQ8NI51 663 aaPredicted RBP29.45■■■□□ 2.3
SMARCD3-203ENST00000392811 BPIFA3Q9BQP9 254 aa29.45■■■□□ 2.3
SMARCD3-203ENST00000392811 GGA1Q9UJY5 639 aa29.45■■■□□ 2.3
SMARCD3-203ENST00000392811 KCNH3Q9ULD8 1083 aa29.45■■■□□ 2.3
SMARCD3-203ENST00000392811 CNTNAP5Q8WYK1 1306 aa29.45■■■□□ 2.3
SMARCD3-203ENST00000392811 BAG3O95817 575 aa29.44■■■□□ 2.3
SMARCD3-203ENST00000392811 PTPREP23469 700 aa29.44■■■□□ 2.3
SMARCD3-203ENST00000392811 PPP4CP60510 307 aa29.44■■■□□ 2.3
SMARCD3-203ENST00000392811 KIAA1524Q8TCG1 905 aa29.44■■■□□ 2.3
SMARCD3-203ENST00000392811 BRWD3Q6RI45 1802 aa29.44■■■□□ 2.3
SMARCD3-203ENST00000392811 RCSD1Q6JBY9 416 aa29.44■■■□□ 2.3
SMARCD3-203ENST00000392811 KRT27Q7Z3Y8 459 aa29.44■■■□□ 2.3
SMARCD3-203ENST00000392811 SRBD1Q8N5C6 995 aaKnown RBP29.44■■■□□ 2.3
SMARCD3-203ENST00000392811 MRFAP1L1Q96HT8 127 aa29.44■■■□□ 2.3
SMARCD3-203ENST00000392811 SPTLC3Q9NUV7 552 aa29.44■■■□□ 2.3
SMARCD3-203ENST00000392811 KRT2P35908 639 aa29.43■■■□□ 2.3
SMARCD3-203ENST00000392811 GRIN1Q05586 938 aa29.43■■■□□ 2.3
SMARCD3-203ENST00000392811 DYNLL2Q96FJ2 89 aa29.43■■■□□ 2.3
SMARCD3-203ENST00000392811 TUBE1Q9UJT0 475 aa29.43■■■□□ 2.3
SMARCD3-203ENST00000392811 BBOX1O75936 387 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms