RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 ANKRD45Q5TZF3 282 aa13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 FBXO46Q6PJ61 603 aaPredicted RBP13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 CRACR2BQ8N4Y2 399 aaPredicted RBP13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 CD99L2Q8TCZ2 262 aa13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 SDR42E1Q8WUS8 393 aa13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 ATP8A2Q9NTI2 1148 aa13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 TNRC18O15417 2968 aaPredicted RBP13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 BRCA2P51587 3418 aa13.75□□□□□ -0.21
IGHV4-28-201ENST00000390612 TRIM75PA6NK02 468 aa13.74□□□□□ -0.21
IGHV4-28-201ENST00000390612 ERC2O15083 957 aa13.74□□□□□ -0.21
IGHV4-28-201ENST00000390612 CAPN15O75808 1086 aa13.74□□□□□ -0.21
IGHV4-28-201ENST00000390612 BCRP11274 1271 aa13.74□□□□□ -0.21
IGHV4-28-201ENST00000390612 MX1P20591 662 aa13.74□□□□□ -0.21
IGHV4-28-201ENST00000390612 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
IGHV4-28-201ENST00000390612 PROCA1Q8NCQ7 364 aaPredicted RBP13.74□□□□□ -0.21
IGHV4-28-201ENST00000390612 OSBP2Q969R2 916 aa13.74□□□□□ -0.21
IGHV4-28-201ENST00000390612 STRBPQ96SI9 672 aaKnown RBP13.74□□□□□ -0.21
IGHV4-28-201ENST00000390612 RWDD1Q9H446 243 aaPredicted RBP13.74□□□□□ -0.21
IGHV4-28-201ENST00000390612 ZBTB21Q9ULJ3 1066 aa13.74□□□□□ -0.21
IGHV4-28-201ENST00000390612 AGTPBP1Q9UPW5 1226 aa13.74□□□□□ -0.21
IGHV4-28-201ENST00000390612 RNF113AO15541 343 aaKnown RBP13.73□□□□□ -0.21
IGHV4-28-201ENST00000390612 GDF11O95390 407 aa13.73□□□□□ -0.21
IGHV4-28-201ENST00000390612 ZFYP08048 801 aaPredicted RBP13.73□□□□□ -0.21
IGHV4-28-201ENST00000390612 APPBP2Q92624 585 aa13.73□□□□□ -0.21
IGHV4-28-201ENST00000390612 MCM9Q9NXL9 1143 aa13.73□□□□□ -0.21
IGHV4-28-201ENST00000390612 HPS5Q9UPZ3 1129 aa13.73□□□□□ -0.21
IGHV4-28-201ENST00000390612 PDE4DIPQ5VU43 2346 aa13.73□□□□□ -0.21
IGHV4-28-201ENST00000390612 MKI67P46013 3256 aaKnown RBP13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 GH2P01242 217 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 POLR3DP05423 398 aaPredicted RBP13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 CYP2C8P10632 490 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 CYP2D6P10635 497 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 GUCY1A2P33402 732 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 RGS19P49795 217 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 PDE1AP54750 535 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 BACE1P56817 501 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 LACTBP83111 547 aaPredicted RBP13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 CERKLQ49MI3 558 aaPredicted RBP13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 TREML2Q5T2D2 321 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 C12orf60Q5U649 245 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 GADL1Q6ZQY3 521 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 PARK7Q99497 189 aaKnown RBP13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 TRIM34Q9BYJ4 488 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 EFCC1Q9HA90 598 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 AS3MTQ9HBK9 375 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 PTPN22Q9Y2R2 807 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 TRIM17Q9Y577 477 aa13.72□□□□□ -0.21
IGHV4-28-201ENST00000390612 GREB1LQ9C091 1923 aaPredicted RBP13.71□□□□□ -0.21
IGHV4-28-201ENST00000390612 CCDC85CA6NKD9 419 aa13.71□□□□□ -0.21
IGHV4-28-201ENST00000390612 GSG1L2A8MUP6 293 aa13.71□□□□□ -0.21
IGHV4-28-201ENST00000390612 C19orf81C9J6K1 198 aa13.71□□□□□ -0.21
IGHV4-28-201ENST00000390612 SMIM22K7EJ46 135 aa13.71□□□□□ -0.21
IGHV4-28-201ENST00000390612 CTGFP29279 349 aa13.71□□□□□ -0.21
IGHV4-28-201ENST00000390612 HMGCS2P54868 508 aa13.71□□□□□ -0.21
IGHV4-28-201ENST00000390612 NUCB1Q02818 461 aa13.71□□□□□ -0.21
IGHV4-28-201ENST00000390612 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.21
IGHV4-28-201ENST00000390612 ARHGAP39Q9C0H5 1083 aa13.71□□□□□ -0.21
IGHV4-28-201ENST00000390612 CPA4Q9UI42 421 aa13.71□□□□□ -0.21
IGHV4-28-201ENST00000390612 SLC4A4Q9Y6R1 1079 aa13.71□□□□□ -0.21
IGHV4-28-201ENST00000390612 RLFQ13129 1914 aa13.7□□□□□ -0.22
IGHV4-28-201ENST00000390612 USP17L10C9JJH3 530 aa13.7□□□□□ -0.22
IGHV4-28-201ENST00000390612 USP17L12C9JPN9 530 aa13.7□□□□□ -0.22
IGHV4-28-201ENST00000390612 USP17L21D6R901 530 aa13.7□□□□□ -0.22
IGHV4-28-201ENST00000390612 HOXA7P31268 230 aaPredicted RBP13.7□□□□□ -0.22
IGHV4-28-201ENST00000390612 ABCB5Q2M3G0 1257 aa13.7□□□□□ -0.22
IGHV4-28-201ENST00000390612 SBK1Q52WX2 424 aa13.7□□□□□ -0.22
IGHV4-28-201ENST00000390612 ZMYM1Q5SVZ6 1142 aa13.7□□□□□ -0.22
IGHV4-28-201ENST00000390612 CTR9Q6PD62 1173 aa13.7□□□□□ -0.22
IGHV4-28-201ENST00000390612 TICAM2Q86XR7 235 aa13.7□□□□□ -0.22
IGHV4-28-201ENST00000390612 SWAP70Q9UH65 585 aa13.7□□□□□ -0.22
IGHV4-28-201ENST00000390612 RBBP6Q7Z6E9 1792 aaKnown RBP13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 CYP2D7A0A087X1C5 515 aa13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 GNRH1P01148 92 aa13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 MTMR2Q13614 643 aa13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 ARHGEF6Q15052 776 aa13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 LRRFIP1Q32MZ4 808 aaKnown RBP13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 C16orf86Q6ZW13 317 aa13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 CHD1LQ86WJ1 897 aa13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 SLC44A5Q8NCS7 719 aa13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 DYNLL2Q96FJ2 89 aa13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 C12orf42Q96LP6 360 aa13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 LNPKQ9C0E8 428 aa13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 OSBPL3Q9H4L5 887 aa13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 EMILIN3Q9NT22 766 aa13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 ZBTB47Q9UFB7 747 aaPredicted RBP13.69□□□□□ -0.22
IGHV4-28-201ENST00000390612 M0R2C6 588 aa13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 GPAA1O43292 621 aa13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 CDK8P49336 464 aa13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 SIAH1Q8IUQ4 282 aa13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 PLEKHM2Q8IWE5 1019 aa13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 ACER1Q8TDN7 264 aa13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 EVI5LQ96CN4 794 aa13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 TRIM47Q96LD4 638 aa13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 SEC62Q99442 399 aaKnown RBP13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 KIAA1683Q9H0B3 1180 aa13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 ASCC2Q9H1I8 757 aaPredicted RBP13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 EPB41L4AQ9HCS5 686 aaPredicted RBP13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 PNMA3Q9UL41 463 aa13.68□□□□□ -0.22
IGHV4-28-201ENST00000390612 PARP14Q460N5 1801 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms