RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 HSP90AB4PQ58FF6 505 aa13.04□□□□□ -0.32
TRAV4-201ENST00000390426 RHPN1Q8TCX5 695 aa13.04□□□□□ -0.32
TRAV4-201ENST00000390426 TMOD4Q9NZQ9 345 aa13.04□□□□□ -0.32
TRAV4-201ENST00000390426 ZBTB21Q9ULJ3 1066 aa13.04□□□□□ -0.32
TRAV4-201ENST00000390426 COG6Q9Y2V7 657 aa13.04□□□□□ -0.32
TRAV4-201ENST00000390426 MAST2Q6P0Q8 1798 aa13.04□□□□□ -0.32
TRAV4-201ENST00000390426 USP17L10C9JJH3 530 aa13.03□□□□□ -0.32
TRAV4-201ENST00000390426 MS4A1P11836 297 aa13.03□□□□□ -0.32
TRAV4-201ENST00000390426 IRX3P78415 501 aaPredicted RBP13.03□□□□□ -0.32
TRAV4-201ENST00000390426 PXYLP1Q8TE99 480 aa13.03□□□□□ -0.32
TRAV4-201ENST00000390426 U2AF1L4Q8WU68 220 aaKnown RBP13.03□□□□□ -0.32
TRAV4-201ENST00000390426 DPF3Q92784 378 aa13.03□□□□□ -0.32
TRAV4-201ENST00000390426 P2RX7Q99572 595 aaKnown RBP13.03□□□□□ -0.32
TRAV4-201ENST00000390426 GINM1Q9NU53 330 aa13.03□□□□□ -0.32
TRAV4-201ENST00000390426 SIPA1L1O43166 1804 aa13.03□□□□□ -0.32
TRAV4-201ENST00000390426 MGAMO43451 1857 aa13.03□□□□□ -0.32
TRAV4-201ENST00000390426 MYO5AQ9Y4I1 1855 aaKnown RBP13.03□□□□□ -0.32
TRAV4-201ENST00000390426 C19orf81C9J6K1 198 aa13.02□□□□□ -0.33
TRAV4-201ENST00000390426 H0YGN5 161 aa13.02□□□□□ -0.33
TRAV4-201ENST00000390426 PEX10O60683 326 aa13.02□□□□□ -0.33
TRAV4-201ENST00000390426 SGPL1O95470 568 aa13.02□□□□□ -0.33
TRAV4-201ENST00000390426 GH2P01242 217 aa13.02□□□□□ -0.33
TRAV4-201ENST00000390426 SIRT2Q8IXJ6 389 aa13.02□□□□□ -0.33
TRAV4-201ENST00000390426 RPAP2Q8IXW5 612 aaPredicted RBP13.02□□□□□ -0.33
TRAV4-201ENST00000390426 ATAD5Q96QE3 1844 aa13.02□□□□□ -0.33
TRAV4-201ENST00000390426 MAGEB6P1A0A0J9YX57 407 aa13.01□□□□□ -0.33
TRAV4-201ENST00000390426 TFRCP02786 760 aaKnown RBP13.01□□□□□ -0.33
TRAV4-201ENST00000390426 HOXA7P31268 230 aaPredicted RBP13.01□□□□□ -0.33
TRAV4-201ENST00000390426 TTF1Q15361 905 aaPredicted RBP13.01□□□□□ -0.33
TRAV4-201ENST00000390426 USP17L2Q6R6M4 530 aa13.01□□□□□ -0.33
TRAV4-201ENST00000390426 UBE2Q1Q7Z7E8 422 aa13.01□□□□□ -0.33
TRAV4-201ENST00000390426 TTC6Q86TZ1 520 aa13.01□□□□□ -0.33
TRAV4-201ENST00000390426 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
TRAV4-201ENST00000390426 CLASRPQ8N2M8 674 aaKnown RBP13.01□□□□□ -0.33
TRAV4-201ENST00000390426 KIF1BPQ96EK5 621 aa13.01□□□□□ -0.33
TRAV4-201ENST00000390426 DEFB118Q96PH6 123 aa13.01□□□□□ -0.33
TRAV4-201ENST00000390426 DNAJC2Q99543 621 aaKnown RBP13.01□□□□□ -0.33
TRAV4-201ENST00000390426 MORF4L1Q9UBU8 362 aa13.01□□□□□ -0.33
TRAV4-201ENST00000390426 GJD2Q9UKL4 321 aa13.01□□□□□ -0.33
TRAV4-201ENST00000390426 DDX19BQ9UMR2 479 aa13.01□□□□□ -0.33
TRAV4-201ENST00000390426 COLQQ9Y215 455 aaPredicted RBP13.01□□□□□ -0.33
TRAV4-201ENST00000390426 LOC285556D6RIA3 1793 aa13.01□□□□□ -0.33
TRAV4-201ENST00000390426 GOLIM4O00461 696 aa13□□□□□ -0.33
TRAV4-201ENST00000390426 HMMRO75330 724 aa13□□□□□ -0.33
TRAV4-201ENST00000390426 FARP2O94887 1054 aaPredicted RBP13□□□□□ -0.33
TRAV4-201ENST00000390426 IFIT2P09913 472 aaKnown RBP13□□□□□ -0.33
TRAV4-201ENST00000390426 PDE6AP16499 860 aa13□□□□□ -0.33
TRAV4-201ENST00000390426 PLCD1P51178 756 aa13□□□□□ -0.33
TRAV4-201ENST00000390426 HERVK_113P62684 666 aa13□□□□□ -0.33
TRAV4-201ENST00000390426 ZYXQ15942 572 aaKnown RBP13□□□□□ -0.33
TRAV4-201ENST00000390426 CERKLQ49MI3 558 aaPredicted RBP13□□□□□ -0.33
TRAV4-201ENST00000390426 SLC9C2Q5TAH2 1124 aa13□□□□□ -0.33
TRAV4-201ENST00000390426 TATDN1Q6P1N9 297 aa13□□□□□ -0.33
TRAV4-201ENST00000390426 EDC3Q96F86 508 aaKnown RBP13□□□□□ -0.33
TRAV4-201ENST00000390426 RIOK1Q9BRS2 568 aaKnown RBP13□□□□□ -0.33
TRAV4-201ENST00000390426 TXNRD2Q9NNW7 524 aa13□□□□□ -0.33
TRAV4-201ENST00000390426 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
TRAV4-201ENST00000390426 ZBTB40Q9NUA8 1239 aa13□□□□□ -0.33
TRAV4-201ENST00000390426 RBPJLQ9UBG7 517 aa13□□□□□ -0.33
TRAV4-201ENST00000390426 SERPINB13Q9UIV8 391 aa13□□□□□ -0.33
TRAV4-201ENST00000390426 CDK5RAP2Q96SN8 1893 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 ZNF532Q9HCE3 1301 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 POLR3DP05423 398 aaPredicted RBP12.99□□□□□ -0.33
TRAV4-201ENST00000390426 CYP2B6P20813 491 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 TRIM32Q13049 653 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 RAB3GAP1Q15042 981 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 Q3C1V9 767 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 TMED8Q6PL24 325 aaPredicted RBP12.99□□□□□ -0.33
TRAV4-201ENST00000390426 GPRC5AQ8NFJ5 357 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 FEZ1Q99689 392 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 PAGR1Q9BTK6 254 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 HTATIP2Q9BUP3 242 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAV4-201ENST00000390426 EHD4Q9H223 541 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 RCAN3Q9UKA8 241 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 DOCK3Q8IZD9 2030 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
TRAV4-201ENST00000390426 RAB11FIP3O75154 756 aa12.98□□□□□ -0.33
TRAV4-201ENST00000390426 SHMT1P34896 483 aa12.98□□□□□ -0.33
TRAV4-201ENST00000390426 ABCB5Q2M3G0 1257 aa12.98□□□□□ -0.33
TRAV4-201ENST00000390426 ACER1Q8TDN7 264 aa12.98□□□□□ -0.33
TRAV4-201ENST00000390426 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAV4-201ENST00000390426 CRNKL1Q9BZJ0 848 aaKnown RBP12.98□□□□□ -0.33
TRAV4-201ENST00000390426 BOLA2Q9H3K6 86 aa12.98□□□□□ -0.33
TRAV4-201ENST00000390426 CABP5Q9NP86 173 aa12.98□□□□□ -0.33
TRAV4-201ENST00000390426 PAK6Q9NQU5 681 aaPredicted RBP12.98□□□□□ -0.33
TRAV4-201ENST00000390426 CEP290O15078 2479 aa12.98□□□□□ -0.33
TRAV4-201ENST00000390426 CENPFP49454 3210 aa12.97□□□□□ -0.33
TRAV4-201ENST00000390426 HMGCRP04035 888 aa12.97□□□□□ -0.33
TRAV4-201ENST00000390426 EVX2Q03828 476 aa12.97□□□□□ -0.33
TRAV4-201ENST00000390426 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
TRAV4-201ENST00000390426 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
TRAV4-201ENST00000390426 POTEEQ6S8J3 1075 aa12.97□□□□□ -0.33
TRAV4-201ENST00000390426 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
TRAV4-201ENST00000390426 CCAR1Q8IX12 1150 aaKnown RBP12.97□□□□□ -0.33
TRAV4-201ENST00000390426 SDR42E1Q8WUS8 393 aa12.97□□□□□ -0.33
TRAV4-201ENST00000390426 TRIB2Q92519 343 aa12.97□□□□□ -0.33
TRAV4-201ENST00000390426 CRISPLD2Q9H0B8 497 aa12.97□□□□□ -0.33
TRAV4-201ENST00000390426 PORCNQ9H237 461 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms