RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 RESP18Q5W5W9 173 aa13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 GOLGA6L1Q8N7Z2 621 aa13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 JMYQ8N9B5 988 aa13.41□□□□□ -0.26
RAPGEF3-201ENST00000389212 CTIFO43310 598 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 SERPINC1P01008 464 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 PPARAQ07869 468 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 KRT23Q9C075 422 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 DDX60Q8IY21 1712 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 ERICH2A1L162 156 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 PPP6R2O75170 966 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 BMP6P22004 513 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 KLRK1P26718 216 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 ERFEQ4G0M1 354 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 CT47A1Q5JQC4 288 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 TRMT44Q8IYL2 757 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 UBAC1Q9BSL1 405 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 FANCLQ9NW38 375 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 VPS54Q9P1Q0 977 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 POLR2DO15514 142 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 MMP1P03956 469 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 IFNAR1P17181 557 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 CFAP100Q494V2 611 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 E4F1Q66K89 784 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 TRIM22Q8IYM9 498 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 SHISA4Q96DD7 197 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 DEF6Q9H4E7 631 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 CABP5Q9NP86 173 aa13.4□□□□□ -0.26
RAPGEF3-201ENST00000389212 TAF1P21675 1872 aa13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 SFPQP23246 707 aaKnown RBP eCLIP13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 SAFBQ15424 915 aaKnown RBP eCLIP13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 KRBA2Q6ZNG9 492 aa13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 KRI1Q8N9T8 703 aaKnown RBP13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 STAG1Q8WVM7 1258 aa13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 CNNM2Q9H8M5 875 aa13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 SERTAD1Q9UHV2 236 aa13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 ZNF215Q9UL58 517 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 TNKSO95271 1327 aa13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 NEMFO60524 1076 aa13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 CASP1P29466 404 aa13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 UBASH3AP57075 661 aa13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 TPM4P67936 248 aa13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 NOM1Q5C9Z4 860 aaKnown RBP13.39□□□□□ -0.27
RAPGEF3-201ENST00000389212 MMP14P50281 582 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 SKIDA1Q1XH10 827 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 EARS2Q5JPH6 523 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 NYAP1Q6ZVC0 841 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 SLC51AQ86UW1 340 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 CRACR2BQ8N4Y2 399 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 FANCBQ8NB91 859 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 ANKRD7Q92527 254 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 TUBE1Q9UJT0 475 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 ECM29Q5VYK3 1845 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 MAGEB6P1A0A0J9YX57 407 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 CUTAO60888 179 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 DNAJC21Q5F1R6 531 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 BPIFA3Q9BQP9 254 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 DOT1LQ8TEK3 1739 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 PLEKHA8P1O95397 391 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 GSDMDP57764 484 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 ICE2Q659A1 982 aa13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 MYH14Q7Z406 1995 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-201ENST00000389212 WNT7AO00755 349 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 NMT2O60551 498 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 MYL5Q02045 173 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 PTF1AQ7RTS3 328 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 CELF1Q92879 486 aaKnown RBP13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 PAXBP1Q9Y5B6 917 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 OLFM4Q6UX06 510 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 SYT10Q6XYQ8 523 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 PPP1R13BQ96KQ4 1090 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 TFCP2L1Q9NZI6 479 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 DDX41Q9UJV9 622 aaKnown RBP13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 FBXO2Q9UK22 296 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 CEP83Q9Y592 693 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 FMR1Q06787 632 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 PARP10Q53GL7 1025 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 LRRN4CLQ8ND94 238 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 ZNF384Q8TF68 577 aa13.37□□□□□ -0.27
RAPGEF3-201ENST00000389212 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 COL1A1P02452 1464 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 PNPLA7Q6ZV29 1317 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 TEX35Q5T0J7 233 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 ANKRD18AQ8IVF6 992 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 FAM177A1Q8N128 213 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 NCAPGQ9BPX3 1015 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 MAN1B1Q9UKM7 699 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 V9GY48 417 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 TULP2O00295 520 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 COBLO75128 1261 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 DEXIO95424 95 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 GNAT2P19087 354 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 AFMP43652 599 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 ENAHQ8N8S7 591 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 STAMQ92783 540 aa13.36□□□□□ -0.27
RAPGEF3-201ENST00000389212 CSRNP2Q9H175 543 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms