RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 H3BS24 57 aa5.04□□□□□ -1.6
RNU6-1040P-201ENST00000383974 CAP2P40123 477 aa5.04□□□□□ -1.6
RNU6-1040P-201ENST00000383974 LETMD1Q6P1Q0 360 aa5.04□□□□□ -1.6
RNU6-1040P-201ENST00000383974 SV2BQ7L1I2 683 aa5.04□□□□□ -1.6
RNU6-1040P-201ENST00000383974 MFSD2AQ8NA29 543 aa5.04□□□□□ -1.6
RNU6-1040P-201ENST00000383974 C19orf73Q9NVV2 129 aa5.04□□□□□ -1.6
RNU6-1040P-201ENST00000383974 FAM53CQ9NYF3 392 aa5.04□□□□□ -1.6
RNU6-1040P-201ENST00000383974 LMCD1Q9NZU5 365 aa5.04□□□□□ -1.6
RNU6-1040P-201ENST00000383974 CAPN6Q9Y6Q1 641 aa5.04□□□□□ -1.6
RNU6-1040P-201ENST00000383974 RBAK-RBAKDNI3L0D1 243 aa5.03□□□□□ -1.6
RNU6-1040P-201ENST00000383974 LDHBP07195 334 aaKnown RBP5.03□□□□□ -1.6
RNU6-1040P-201ENST00000383974 AFMP43652 599 aa5.03□□□□□ -1.6
RNU6-1040P-201ENST00000383974 PRAMEF13Q5VWM6 474 aa5.03□□□□□ -1.6
RNU6-1040P-201ENST00000383974 TTBK2Q6IQ55 1244 aa5.03□□□□□ -1.6
RNU6-1040P-201ENST00000383974 RIN3Q8TB24 985 aa5.03□□□□□ -1.6
RNU6-1040P-201ENST00000383974 XAGE3Q8WTP9 111 aa5.03□□□□□ -1.6
RNU6-1040P-201ENST00000383974 KIRREL1Q96J84 757 aa5.03□□□□□ -1.6
RNU6-1040P-201ENST00000383974 ST14Q9Y5Y6 855 aa5.03□□□□□ -1.6
RNU6-1040P-201ENST00000383974 CBX7O95931 251 aa5.02□□□□□ -1.61
RNU6-1040P-201ENST00000383974 GLI1P08151 1106 aa5.02□□□□□ -1.61
RNU6-1040P-201ENST00000383974 GRK4P32298 578 aa5.02□□□□□ -1.61
RNU6-1040P-201ENST00000383974 SEPT6Q14141 434 aa5.02□□□□□ -1.61
RNU6-1040P-201ENST00000383974 ZNF746Q6NUN9 644 aaPredicted RBP5.02□□□□□ -1.61
RNU6-1040P-201ENST00000383974 MPZL3Q6UWV2 235 aa5.02□□□□□ -1.61
RNU6-1040P-201ENST00000383974 HID1Q8IV36 788 aa5.02□□□□□ -1.61
RNU6-1040P-201ENST00000383974 BHLHE22Q8NFJ8 381 aaPredicted RBP5.02□□□□□ -1.61
RNU6-1040P-201ENST00000383974 SNCAIPQ9Y6H5 919 aa5.02□□□□□ -1.61
RNU6-1040P-201ENST00000383974 CST3P01034 146 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1040P-201ENST00000383974 GNA15P30679 374 aa5.01□□□□□ -1.61
RNU6-1040P-201ENST00000383974 GDNFP39905 211 aa5.01□□□□□ -1.61
RNU6-1040P-201ENST00000383974 CCDC85BQ15834 202 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1040P-201ENST00000383974 FBLN7Q53RD9 439 aa5.01□□□□□ -1.61
RNU6-1040P-201ENST00000383974 PRR23BQ6ZRT6 265 aa5.01□□□□□ -1.61
RNU6-1040P-201ENST00000383974 CILP2Q8IUL8 1156 aa5.01□□□□□ -1.61
RNU6-1040P-201ENST00000383974 NPAS4Q8IUM7 802 aa5.01□□□□□ -1.61
RNU6-1040P-201ENST00000383974 DPH2Q9BQC3 489 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1040P-201ENST00000383974 PCDHB5Q9Y5E4 795 aa5.01□□□□□ -1.61
RNU6-1040P-201ENST00000383974 TSPAN15O95858 294 aa5□□□□□ -1.61
RNU6-1040P-201ENST00000383974 EIF4BP23588 611 aaKnown RBP5□□□□□ -1.61
RNU6-1040P-201ENST00000383974 RAP1GAPP47736 663 aa5□□□□□ -1.61
RNU6-1040P-201ENST00000383974 RPS26P62854 115 aaKnown RBP5□□□□□ -1.61
RNU6-1040P-201ENST00000383974 TNK2Q07912 1038 aa5□□□□□ -1.61
RNU6-1040P-201ENST00000383974 KCNA1Q09470 495 aa5□□□□□ -1.61
RNU6-1040P-201ENST00000383974 ERICH6Q7L0X2 663 aa5□□□□□ -1.61
RNU6-1040P-201ENST00000383974 THAP5Q7Z6K1 395 aa5□□□□□ -1.61
RNU6-1040P-201ENST00000383974 UBE2FQ969M7 185 aa5□□□□□ -1.61
RNU6-1040P-201ENST00000383974 FRMD6Q96NE9 622 aa5□□□□□ -1.61
RNU6-1040P-201ENST00000383974 GFRA2O00451 464 aa4.99□□□□□ -1.61
RNU6-1040P-201ENST00000383974 LMNB1P20700 586 aa4.99□□□□□ -1.61
RNU6-1040P-201ENST00000383974 KIR3DL1P43629 444 aa4.99□□□□□ -1.61
RNU6-1040P-201ENST00000383974 TMEM67Q5HYA8 995 aa4.99□□□□□ -1.61
RNU6-1040P-201ENST00000383974 CDH24Q86UP0 819 aa4.99□□□□□ -1.61
RNU6-1040P-201ENST00000383974 COX4I2Q96KJ9 171 aa4.99□□□□□ -1.61
RNU6-1040P-201ENST00000383974 ALPK1Q96QP1 1244 aa4.99□□□□□ -1.61
RNU6-1040P-201ENST00000383974 PPP1R16BQ96T49 567 aa4.99□□□□□ -1.61
RNU6-1040P-201ENST00000383974 RNF19AQ9NV58 838 aa4.99□□□□□ -1.61
RNU6-1040P-201ENST00000383974 SLAMF8Q9P0V8 285 aa4.99□□□□□ -1.61
RNU6-1040P-201ENST00000383974 ZSWIM5Q9P217 1185 aa4.99□□□□□ -1.61
RNU6-1040P-201ENST00000383974 TJP2Q9UDY2 1190 aa4.99□□□□□ -1.61
RNU6-1040P-201ENST00000383974 PGRP06401 933 aa4.98□□□□□ -1.61
RNU6-1040P-201ENST00000383974 CYP7A1P22680 504 aa4.98□□□□□ -1.61
RNU6-1040P-201ENST00000383974 CFPP27918 469 aa4.98□□□□□ -1.61
RNU6-1040P-201ENST00000383974 LIG3P49916 1009 aa4.98□□□□□ -1.61
RNU6-1040P-201ENST00000383974 MAP3K11Q16584 847 aa4.98□□□□□ -1.61
RNU6-1040P-201ENST00000383974 AGMOQ6ZNB7 445 aa4.98□□□□□ -1.61
RNU6-1040P-201ENST00000383974 SYDE1Q6ZW31 735 aaPredicted RBP4.98□□□□□ -1.61
RNU6-1040P-201ENST00000383974 MRPL41Q8IXM3 137 aaKnown RBP4.98□□□□□ -1.61
RNU6-1040P-201ENST00000383974 TOX2Q96NM4 488 aa4.98□□□□□ -1.61
RNU6-1040P-201ENST00000383974 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
RNU6-1040P-201ENST00000383974 DNAJC25-GNG10A0A024R161 153 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 PRPF40AO75400 957 aaKnown RBP4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 ESR1P03372 595 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 TFE3P19532 575 aaPredicted RBP4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 RALGPS1Q5JS13 557 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 MEI1Q5TIA1 1274 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 C1QL4Q86Z23 238 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 PIWIL2Q8TC59 973 aaKnown RBP4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 CCDC120Q96HB5 630 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 TMEM87BQ96K49 555 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 DIRC2Q96SL1 478 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 MIR1-1HGQ9H1L0 117 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 NSUN3Q9H649 340 aaKnown RBP4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 TIMELESSQ9UNS1 1208 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 TACC3Q9Y6A5 838 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 AK5Q9Y6K8 562 aa4.97□□□□□ -1.61
RNU6-1040P-201ENST00000383974 WASH4PA8MWX3 477 aa4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 KRT1P04264 644 aa4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 ETV3P41162 512 aa4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 ERVFC1P60507 584 aa4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 SLC6A19Q695T7 634 aa4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 TMPRSS7Q7RTY8 843 aa4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 TTC6Q86TZ1 520 aa4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 LRRC56Q8IYG6 542 aaPredicted RBP4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 FBXO15Q8NCQ5 510 aaPredicted RBP4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 DNAJB8Q8NHS0 232 aa4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 Q96M66 194 aa4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 DUSP9Q99956 384 aaKnown RBP4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 TMEM59LQ9UK28 342 aa4.96□□□□□ -1.62
RNU6-1040P-201ENST00000383974 C1QTNF9P0C862 333 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms