RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 ARMT1Q9H993 441 aa13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 PI4KBQ9UBF8 816 aa13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 ZBTB47Q9UFB7 747 aaPredicted RBP13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 HERC5Q9UII4 1024 aaKnown RBP13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 KIAA0100Q14667 2235 aaKnown RBP13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 PARP14Q460N5 1801 aa13.96□□□□□ -0.17
APOBEC3F-202ENST00000381565 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
APOBEC3F-202ENST00000381565 MBD4O95243 580 aa13.95□□□□□ -0.18
APOBEC3F-202ENST00000381565 USP5P45974 858 aa13.95□□□□□ -0.18
APOBEC3F-202ENST00000381565 JAG1P78504 1218 aa13.95□□□□□ -0.18
APOBEC3F-202ENST00000381565 SP3Q02447 781 aa13.95□□□□□ -0.18
APOBEC3F-202ENST00000381565 SHROOM1Q2M3G4 852 aaPredicted RBP13.95□□□□□ -0.18
APOBEC3F-202ENST00000381565 SDR42E1Q8WUS8 393 aa13.95□□□□□ -0.18
APOBEC3F-202ENST00000381565 PUS7LQ9H0K6 701 aaKnown RBP13.95□□□□□ -0.18
APOBEC3F-202ENST00000381565 EFCC1Q9HA90 598 aa13.95□□□□□ -0.18
APOBEC3F-202ENST00000381565 SZT2Q5T011 3432 aa13.95□□□□□ -0.18
APOBEC3F-202ENST00000381565 PRKAB2O43741 272 aa13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 GLRX3O76003 335 aaKnown RBP13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 SNAPC2Q13487 334 aa13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 ZNF333Q96JL9 665 aa13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 CRNKL1Q9BZJ0 848 aaKnown RBP13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 LNPKQ9C0E8 428 aa13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 EHD4Q9H223 541 aa13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 RWDD1Q9H446 243 aaPredicted RBP13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 STAP2Q9UGK3 403 aa13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 AFG3L2Q9Y4W6 797 aa13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 LAMA4Q16363 1823 aa13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 MYH4Q9Y623 1939 aa13.94□□□□□ -0.18
APOBEC3F-202ENST00000381565 BTBD19C9JJ37 291 aa13.93□□□□□ -0.18
APOBEC3F-202ENST00000381565 ERC2O15083 957 aa13.93□□□□□ -0.18
APOBEC3F-202ENST00000381565 CETPP11597 493 aa13.93□□□□□ -0.18
APOBEC3F-202ENST00000381565 PRKAR2AP13861 404 aaKnown RBP13.93□□□□□ -0.18
APOBEC3F-202ENST00000381565 CAP2P40123 477 aa13.93□□□□□ -0.18
APOBEC3F-202ENST00000381565 PDE1AP54750 535 aa13.93□□□□□ -0.18
APOBEC3F-202ENST00000381565 DCP1AQ9NPI6 582 aaPredicted RBP13.93□□□□□ -0.18
APOBEC3F-202ENST00000381565 PICK1Q9NRD5 415 aa13.93□□□□□ -0.18
APOBEC3F-202ENST00000381565 RANBP2P49792 3224 aaKnown RBP13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 DOCK3Q8IZD9 2030 aa13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 A0A0G2JLL6 359 aaPredicted RBP13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 HLA-DOAP06340 250 aa13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 FXR1P51114 621 aaKnown RBP eCLIP13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 PLCD1P51178 756 aa13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 NUCB1Q02818 461 aa13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 OTUD7BQ6GQQ9 843 aa13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 B4GALNT3Q6L9W6 998 aa13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 ZSCAN25Q6NSZ9 544 aa13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 PRRT2Q7Z6L0 340 aaPredicted RBP13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 FOXP4Q8IVH2 680 aaPredicted RBP13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 OSBP2Q969R2 916 aa13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 PTCH2Q9Y6C5 1203 aa13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 ZHX2Q9Y6X8 837 aa13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 RLFQ13129 1914 aa13.92□□□□□ -0.18
APOBEC3F-202ENST00000381565 ADGRA2Q96PE1 1338 aa13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 SMIM22K7EJ46 135 aa13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 M0R2C6 588 aa13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 RNF113AO15541 343 aaKnown RBP13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 GDF11O95390 407 aa13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 CYP2D6P10635 497 aa13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 GABPAQ06546 454 aa13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 GPAT2Q6NUI2 795 aa13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 TATDN1Q6P1N9 297 aa13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 CHD1LQ86WJ1 897 aa13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 CRACR2BQ8N4Y2 399 aaPredicted RBP13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 APPBP2Q92624 585 aa13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 ZCCHC17Q9NP64 241 aaKnown RBP13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 MCM9Q9NXL9 1143 aa13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 SERPINB13Q9UIV8 391 aa13.91□□□□□ -0.18
APOBEC3F-202ENST00000381565 CXCL11O14625 94 aa13.9□□□□□ -0.18
APOBEC3F-202ENST00000381565 SHMT1P34896 483 aa13.9□□□□□ -0.18
APOBEC3F-202ENST00000381565 TAF1CQ15572 869 aaPredicted RBP13.9□□□□□ -0.18
APOBEC3F-202ENST00000381565 ANKRD23Q86SG2 305 aa13.9□□□□□ -0.18
APOBEC3F-202ENST00000381565 ARHGAP39Q9C0H5 1083 aa13.9□□□□□ -0.18
APOBEC3F-202ENST00000381565 ZBTB21Q9ULJ3 1066 aa13.9□□□□□ -0.18
APOBEC3F-202ENST00000381565 A0A0G2JMZ2 1700 aa13.9□□□□□ -0.18
APOBEC3F-202ENST00000381565 CYP2D7A0A087X1C5 515 aa13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 TRIM75PA6NK02 468 aa13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 GPAA1O43292 621 aa13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 ZFYP08048 801 aaPredicted RBP13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 NUBP1P53384 320 aa13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 TTC6Q86TZ1 520 aa13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 PLEKHM2Q8IWE5 1019 aa13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 STRBPQ96SI9 672 aaKnown RBP13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 SEC62Q99442 399 aaKnown RBP13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 FSD1Q9BTV5 496 aa13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 EPB41L4AQ9HCS5 686 aaPredicted RBP13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 ATP8A2Q9NTI2 1148 aa13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 SLC4A4Q9Y6R1 1079 aa13.89□□□□□ -0.19
APOBEC3F-202ENST00000381565 PLXNB2O15031 1838 aa13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 COL11A1P12107 1806 aaPredicted RBP13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 USP17L5A8MUK1 530 aa13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 GSG1L2A8MUP6 293 aa13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 PDHXO00330 501 aa13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 POLR3DP05423 398 aaPredicted RBP13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 ASNSP08243 561 aa13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 SPP2Q13103 211 aa13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 ZMYM1Q5SVZ6 1142 aa13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 SLC44A5Q8NCS7 719 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms