RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 SYNE3Q6ZMZ3 975 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 ZSCAN29Q8IWY8 852 aaPredicted RBP9.37□□□□□ -0.91
ERCC8-202ENST00000381118 FAM184AQ8NB25 1140 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 SYT17Q9BSW7 474 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 GJA3Q9Y6H8 435 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 SIPA1L1O43166 1804 aa9.37□□□□□ -0.91
ERCC8-202ENST00000381118 DICER1Q9UPY3 1922 aaKnown RBP9.37□□□□□ -0.91
ERCC8-202ENST00000381118 GOLGA8AA7E2F4 631 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 BRD1O95696 1058 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 CDC27P30260 824 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 DLGAP5Q15398 846 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 SEC23AQ15436 765 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 C16orf86Q6ZW13 317 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 TTC6Q86TZ1 520 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 CHMP4CQ96CF2 233 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 GMLQ99445 158 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 FAM198AQ9UFP1 575 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 BAZ2BQ9UIF8 2168 aaKnown RBP9.36□□□□□ -0.91
ERCC8-202ENST00000381118 DDTLA6NHG4 134 aaPredicted RBP9.36□□□□□ -0.91
ERCC8-202ENST00000381118 SPDYE2BA6NHP3 402 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 FAM196BA6NMK8 535 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 TCP10L2B9ZVM9 353 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 HLA-DOAP06340 250 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 SPDYE6P0CI01 402 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 RASA1P20936 1047 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 ZNF654Q8IZM8 581 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 CMTR1Q8N1G2 835 aaKnown RBP9.36□□□□□ -0.91
ERCC8-202ENST00000381118 CCDC82Q8N4S0 544 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 AGBL3Q8NEM8 1001 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 ZNF287Q9HBT7 754 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 IL17RBQ9NRM6 502 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 WDR33Q9C0J8 1336 aaKnown RBP9.36□□□□□ -0.91
ERCC8-202ENST00000381118 LTBP3Q9NS15 1303 aa9.36□□□□□ -0.91
ERCC8-202ENST00000381118 DHX16O60231 1041 aaKnown RBP9.35□□□□□ -0.91
ERCC8-202ENST00000381118 EIF6P56537 245 aaKnown RBP9.35□□□□□ -0.91
ERCC8-202ENST00000381118 TNIP1Q15025 636 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 RBM26Q5T8P6 1007 aaKnown RBP9.35□□□□□ -0.91
ERCC8-202ENST00000381118 CDC37L1Q7L3B6 337 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 TMTC2Q8N394 836 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 SMARCC2Q8TAQ2 1214 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 PHKBQ93100 1093 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 GBP4Q96PP9 640 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 LLPHQ9BRT6 129 aaKnown RBP9.35□□□□□ -0.91
ERCC8-202ENST00000381118 VEZTQ9HBM0 779 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 SERPINB13Q9UIV8 391 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 STX8Q9UNK0 236 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 SCAF8Q9UPN6 1271 aaKnown RBP9.35□□□□□ -0.91
ERCC8-202ENST00000381118 MTMR7Q9Y216 660 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 BAG4O95429 457 aaKnown RBP9.35□□□□□ -0.91
ERCC8-202ENST00000381118 ZSCAN22P10073 491 aaPredicted RBP9.35□□□□□ -0.91
ERCC8-202ENST00000381118 MCM4P33991 863 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 HMGN5P82970 282 aaKnown RBP9.35□□□□□ -0.91
ERCC8-202ENST00000381118 FERMT3Q86UX7 667 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 CRACR2BQ8N4Y2 399 aaPredicted RBP9.35□□□□□ -0.91
ERCC8-202ENST00000381118 MTA3Q9BTC8 594 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 ANP32EQ9BTT0 268 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 IDI2Q9BXS1 227 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 TMOD2Q9NZR1 351 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 MTMR6Q9Y217 621 aa9.35□□□□□ -0.91
ERCC8-202ENST00000381118 ZNF541Q9H0D2 1346 aa9.34□□□□□ -0.91
ERCC8-202ENST00000381118 MYH4Q9Y623 1939 aa9.34□□□□□ -0.91
ERCC8-202ENST00000381118 H3BQV1 296 aa9.34□□□□□ -0.91
ERCC8-202ENST00000381118 FDPSP14324 419 aaKnown RBP9.34□□□□□ -0.91
ERCC8-202ENST00000381118 PDCP20941 246 aa9.34□□□□□ -0.91
ERCC8-202ENST00000381118 GUCY1B3Q02153 619 aa9.34□□□□□ -0.91
ERCC8-202ENST00000381118 RTN1Q16799 776 aa9.34□□□□□ -0.91
ERCC8-202ENST00000381118 NBPF9Q3BBW0 867 aa9.34□□□□□ -0.91
ERCC8-202ENST00000381118 IFFO2Q5TF58 517 aa9.34□□□□□ -0.91
ERCC8-202ENST00000381118 MCTP1Q6DN14 999 aa9.34□□□□□ -0.91
ERCC8-202ENST00000381118 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
ERCC8-202ENST00000381118 CATIPQ7Z7H3 387 aa9.34□□□□□ -0.91
ERCC8-202ENST00000381118 MYOZ2Q9NPC6 264 aa9.34□□□□□ -0.91
ERCC8-202ENST00000381118 FAM217BQ9NTX9 383 aaPredicted RBP9.34□□□□□ -0.91
ERCC8-202ENST00000381118 UBE2Q2LH0YL09 131 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 FZD9O00144 591 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 WNT10BO00744 389 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 F13A1P00488 732 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 EGFRP00533 1210 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 GMPSP49915 693 aaPredicted RBP9.33□□□□□ -0.92
ERCC8-202ENST00000381118 GABPAQ06546 454 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 RCSD1Q6JBY9 416 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 FANCBQ8NB91 859 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 ORC3Q9UBD5 711 aaPredicted RBP9.33□□□□□ -0.92
ERCC8-202ENST00000381118 ZNF70Q9UC06 446 aaPredicted RBP9.33□□□□□ -0.92
ERCC8-202ENST00000381118 MPHOSPH10O00566 681 aaKnown RBP9.33□□□□□ -0.92
ERCC8-202ENST00000381118 MYO1BO43795 1136 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 AKR1B1P15121 316 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 YBX3P16989 372 aaKnown RBP eCLIP9.33□□□□□ -0.92
ERCC8-202ENST00000381118 LMNB1P20700 586 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 CPLX2Q6PUV4 134 aaKnown RBP9.33□□□□□ -0.92
ERCC8-202ENST00000381118 SAMD7Q7Z3H4 446 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 CLEC10AQ8IUN9 316 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 MICALL2Q8IY33 904 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 CEP95Q96GE4 821 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 AIFM3Q96NN9 605 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 CSRNP1Q96S65 589 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 SLC26A6Q9BXS9 759 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 TRIM34Q9BYJ4 488 aa9.33□□□□□ -0.92
ERCC8-202ENST00000381118 DHX36Q9H2U1 1008 aaKnown RBP9.33□□□□□ -0.92
ERCC8-202ENST00000381118 DNAJC18Q9H819 358 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms