RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 PRR29P0C7W0 189 aa18.67■□□□□ 0.58
VPS16-203ENST00000380469 BCORQ6W2J9 1755 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 MAGEB6P1A0A0J9YX57 407 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 ERCC6LQ2NKX8 1250 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 HSP90AA4PQ58FG1 418 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 OXER1Q8TDS5 423 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 GNL3LQ9NVN8 582 aaKnown RBP18.66■□□□□ 0.58
VPS16-203ENST00000380469 RAI14Q9P0K7 980 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 ANAPC4Q9UJX5 808 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 GOLGA8FQ08AF8 430 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 GOLGA8DPQ0D2H9 430 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 TBX2Q13207 712 aaPredicted RBP18.66■□□□□ 0.58
VPS16-203ENST00000380469 NUTM2AQ8IVF1 878 aaPredicted RBP18.66■□□□□ 0.58
VPS16-203ENST00000380469 REXO1L1PQ8IX06 675 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 KRT222Q8N1A0 295 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 BAG1Q99933 345 aaPredicted RBP18.66■□□□□ 0.58
VPS16-203ENST00000380469 SRRTQ9BXP5 876 aaKnown RBP18.66■□□□□ 0.58
VPS16-203ENST00000380469 CSRNP2Q9H175 543 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 INTS13Q9NVM9 706 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 ABCF2Q9UG63 623 aa18.66■□□□□ 0.58
VPS16-203ENST00000380469 TNKSO95271 1327 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 NHSL1Q5SYE7 1610 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 A0A0G2JS52 829 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 TRIM75PA6NK02 468 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 ACTN4O43707 911 aaKnown RBP18.65■□□□□ 0.58
VPS16-203ENST00000380469 ZNF18P17022 549 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 ATP6V1AP38606 617 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 CRKLP46109 303 aaKnown RBP18.65■□□□□ 0.58
VPS16-203ENST00000380469 FMR1Q06787 632 aaKnown RBP eCLIP18.65■□□□□ 0.58
VPS16-203ENST00000380469 PTPN21Q16825 1174 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 SPECC1LQ69YQ0 1117 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 TRIM65Q6PJ69 517 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 SDR42E1Q8WUS8 393 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 CDC5LQ99459 802 aaKnown RBP18.65■□□□□ 0.58
VPS16-203ENST00000380469 NIP7Q9Y221 180 aaKnown RBP eCLIP18.65■□□□□ 0.58
VPS16-203ENST00000380469 GOLGA6L9A6NEM1 432 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 GABPB1Q06547 395 aaPredicted RBP18.65■□□□□ 0.58
VPS16-203ENST00000380469 SEC23AQ15436 765 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 GRAMD1CQ8IYS0 662 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 IQSEC3Q9UPP2 1182 aaPredicted RBP18.65■□□□□ 0.58
VPS16-203ENST00000380469 PPP2R2CQ9Y2T4 447 aa18.65■□□□□ 0.58
VPS16-203ENST00000380469 STX10O60499 249 aa18.64■□□□□ 0.57
VPS16-203ENST00000380469 CAMTA2O94983 1202 aa18.64■□□□□ 0.57
VPS16-203ENST00000380469 KRT2P35908 639 aa18.64■□□□□ 0.57
VPS16-203ENST00000380469 ZNF827Q17R98 1081 aa18.64■□□□□ 0.57
VPS16-203ENST00000380469 ERCC5P28715 1186 aaPredicted RBP18.63■□□□□ 0.57
VPS16-203ENST00000380469 PLCD1P51178 756 aa18.63■□□□□ 0.57
VPS16-203ENST00000380469 CATIPQ7Z7H3 387 aa18.63■□□□□ 0.57
VPS16-203ENST00000380469 TMEM139Q8IV31 216 aa18.63■□□□□ 0.57
VPS16-203ENST00000380469 ZSCAN10Q96SZ4 725 aaPredicted RBP18.63■□□□□ 0.57
VPS16-203ENST00000380469 AATFQ9NY61 560 aaKnown RBP eCLIP18.63■□□□□ 0.57
VPS16-203ENST00000380469 URI1O94763 535 aaPredicted RBP18.63■□□□□ 0.57
VPS16-203ENST00000380469 NTSR2O95665 410 aa18.63■□□□□ 0.57
VPS16-203ENST00000380469 CT47A1Q5JQC4 288 aaPredicted RBP18.63■□□□□ 0.57
VPS16-203ENST00000380469 ADGRA1Q86SQ6 560 aa18.63■□□□□ 0.57
VPS16-203ENST00000380469 TRMT44Q8IYL2 757 aaKnown RBP18.63■□□□□ 0.57
VPS16-203ENST00000380469 MNS1Q8NEH6 495 aa18.63■□□□□ 0.57
VPS16-203ENST00000380469 COL14A1Q05707 1796 aaKnown RBP18.63■□□□□ 0.57
VPS16-203ENST00000380469 PRPF3O43395 683 aaKnown RBP18.62■□□□□ 0.57
VPS16-203ENST00000380469 BMP15O95972 392 aa18.62■□□□□ 0.57
VPS16-203ENST00000380469 IFIT1BQ5T764 474 aaKnown RBP18.62■□□□□ 0.57
VPS16-203ENST00000380469 SPATA20Q8TB22 786 aa18.62■□□□□ 0.57
VPS16-203ENST00000380469 UBXN4Q92575 508 aa18.62■□□□□ 0.57
VPS16-203ENST00000380469 BRMS1Q9HCU9 246 aa18.62■□□□□ 0.57
VPS16-203ENST00000380469 RBM28Q9NW13 759 aaKnown RBP18.62■□□□□ 0.57
VPS16-203ENST00000380469 VPS54Q9P1Q0 977 aa18.62■□□□□ 0.57
VPS16-203ENST00000380469 ZHX1Q9UKY1 873 aaPredicted RBP18.62■□□□□ 0.57
VPS16-203ENST00000380469 H2AFXP16104 143 aaPredicted RBP18.62■□□□□ 0.57
VPS16-203ENST00000380469 USP49Q70CQ1 688 aa18.62■□□□□ 0.57
VPS16-203ENST00000380469 ENAHQ8N8S7 591 aaPredicted RBP18.62■□□□□ 0.57
VPS16-203ENST00000380469 DHX58Q96C10 678 aa18.62■□□□□ 0.57
VPS16-203ENST00000380469 KIF20AO95235 890 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 ARHGAP29Q52LW3 1261 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 IQCA1Q86XH1 822 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 TC2NQ8N9U0 490 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 LRRN4CLQ8ND94 238 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 PHF20Q9BVI0 1012 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 PLCH1Q4KWH8 1693 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 MYH6P13533 1939 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 VWA3AA6NCI4 1184 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 CALM1P0DP23 149 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 CALM2P0DP24 149 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 CALM3P0DP25 149 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 ADKP55263 362 aaKnown RBP18.61■□□□□ 0.57
VPS16-203ENST00000380469 BMS1Q14692 1282 aaKnown RBP18.61■□□□□ 0.57
VPS16-203ENST00000380469 PKN1Q16512 942 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 FERMT2Q96AC1 680 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 SAMSN1Q9NSI8 373 aaKnown RBP18.61■□□□□ 0.57
VPS16-203ENST00000380469 FAM53CQ9NYF3 392 aa18.61■□□□□ 0.57
VPS16-203ENST00000380469 V9GY48 417 aaPredicted RBP18.61■□□□□ 0.57
VPS16-203ENST00000380469 SLFN14P0C7P3 912 aa18.6■□□□□ 0.57
VPS16-203ENST00000380469 CASQ1P31415 396 aa18.6■□□□□ 0.57
VPS16-203ENST00000380469 GYG1P46976 350 aa18.6■□□□□ 0.57
VPS16-203ENST00000380469 NR1I3Q14994 352 aa18.6■□□□□ 0.57
VPS16-203ENST00000380469 CAVIN4Q5BKX8 364 aa18.6■□□□□ 0.57
VPS16-203ENST00000380469 FAM177A1Q8N128 213 aaPredicted RBP18.6■□□□□ 0.57
VPS16-203ENST00000380469 ARGLU1Q9NWB6 273 aaPredicted RBP18.6■□□□□ 0.57
VPS16-203ENST00000380469 ZNF804BA4D1E1 1349 aa18.6■□□□□ 0.57
VPS16-203ENST00000380469 LOC102724428A0A0B4J2F2 783 aa18.6■□□□□ 0.57
VPS16-203ENST00000380469 TPM1P09493 284 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms