RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 USP17L21D6R901 530 aa9.21□□□□□ -0.94
PDLIM5-204ENST00000380176 CMA1P23946 247 aa9.21□□□□□ -0.94
PDLIM5-204ENST00000380176 TOB1P50616 345 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-204ENST00000380176 CCDC186Q7Z3E2 898 aa9.21□□□□□ -0.94
PDLIM5-204ENST00000380176 KIAA1468Q9P260 1216 aa9.21□□□□□ -0.94
PDLIM5-204ENST00000380176 hCG_1642624A0A1W2PR95 340 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 BIN1O00499 593 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 MMP1P03956 469 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 LRMPQ12912 555 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 DPCR1Q3MIW9 517 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 ESR2Q92731 530 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 BRIP1Q9BX63 1249 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 LRRC4BQ9NT99 713 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 ANO10Q9NW15 660 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 IRS2Q9Y4H2 1338 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 CAVIN2O95810 425 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 RFC4P35249 363 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 NR5A1Q13285 461 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 SLC4A8Q2Y0W8 1093 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 FAM196AQ6ZSG2 479 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 NOSTRINQ8IVI9 506 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 DRC7Q8IY82 874 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 DIS3L2Q8IYB7 885 aaKnown RBP9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 AOPEPQ8N6M6 819 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 KIAA1524Q8TCG1 905 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 OXER1Q8TDS5 423 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 ZSCAN10Q96SZ4 725 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 DLEC1Q9Y238 1755 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 GOLGA6L19H0YKK7 550 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 NPHP1O15259 732 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 NMT2O60551 498 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 PPP6R2O75170 966 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 CYP2D6P10635 497 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 NFIXQ14938 502 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 CCDC144BQ3MJ40 725 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 ISM2Q6H9L7 571 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 TMTC2Q8N394 836 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 GPR101Q96P66 508 aaPredicted RBP9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 ANKRD2Q9GZV1 360 aa9.2□□□□□ -0.94
PDLIM5-204ENST00000380176 ONECUT3O60422 494 aaPredicted RBP9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 GRIN1Q05586 938 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 SPECC1Q5M775 1068 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 TRAPPC3LQ5T215 181 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 TRIM22Q8IYM9 498 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 MTA3Q9BTC8 594 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 DCP1AQ9NPI6 582 aaPredicted RBP9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 HPSEQ9Y251 543 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 LAMB1P07942 1786 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 BECN2A8MW95 431 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 GOLGA6L6A8MZA4 724 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 PLEKHA8P1O95397 391 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 DEXIO95424 95 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 SLC3A2P08195 630 aaKnown RBP9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 FGRP09769 529 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 GRIK5Q16478 980 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 GJD4Q96KN9 370 aaPredicted RBP9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 CLIP2Q9UDT6 1046 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 KIAA1551Q9HCM1 1747 aa9.19□□□□□ -0.94
PDLIM5-204ENST00000380176 SYKP43405 635 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 FUT2Q10981 343 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 PKN1Q16512 942 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 FAM47AQ5JRC9 791 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 IFIT1BQ5T764 474 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 RESP18Q5W5W9 173 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 SARM1Q6SZW1 724 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 CEP57L1Q8IYX8 460 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 WASF1Q92558 559 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 SPTLC3Q9NUV7 552 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 GOLGB1Q14789 3259 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 CCDC196A0A1B0GTZ2 297 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 FAM205CA6NFA0 338 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 SPDYE2BA6NHP3 402 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 SPDYE6P0CI01 402 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 TROAPQ12815 778 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 ARID5BQ14865 1188 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 SPDYE2Q495Y8 402 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 DNTTIP2Q5QJE6 756 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 RBM26Q5T8P6 1007 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 VPS54Q9P1Q0 977 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 ANKIB1Q9P2G1 1089 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 PCDHB6Q9Y5E3 794 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 PDS5AQ29RF7 1337 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 MAST2Q6P0Q8 1798 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 RCAN1P53805 252 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 CACNB1Q02641 598 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 PNOCQ13519 176 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 LONRF3Q496Y0 759 aa9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 EARS2Q5JPH6 523 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 CACTINQ8WUQ7 758 aaKnown RBP9.18□□□□□ -0.94
PDLIM5-204ENST00000380176 TPM3P06753 285 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 TPM2P07951 284 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 USP17L8P0C7I0 530 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 ATP2B1P20020 1258 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 JMYQ8N9B5 988 aa9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 CRNKL1Q9BZJ0 848 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 FOXP1Q9H334 677 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-204ENST00000380176 CABP5Q9NP86 173 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms