RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 CCDC51Q96ER9 411 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 NOP53Q9NZM5 478 aaKnown RBP12.24□□□□□ -0.45
USP6NL-202ENST00000379237 SBNO2Q9Y2G9 1366 aa12.24□□□□□ -0.45
USP6NL-202ENST00000379237 SPAG1Q07617 926 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 FBF1Q8TES7 1133 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 CCDC42Q96M95 316 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 EPN3Q9H201 632 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 TLDC2A0PJX2 215 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 CCDC189A1A4V9 331 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 PPP1R37O75864 691 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 ZRSR2Q15696 482 aaKnown RBP12.23□□□□□ -0.45
USP6NL-202ENST00000379237 ZNF589Q86UQ0 364 aaPredicted RBP12.23□□□□□ -0.45
USP6NL-202ENST00000379237 SYCP2Q9BX26 1530 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 SMIM23A6NLE4 172 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 BACH1O14867 736 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 TEX33O43247 280 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 FSBPO95073 299 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 LUC7L3O95232 432 aaKnown RBP12.23□□□□□ -0.45
USP6NL-202ENST00000379237 ALS2CLQ60I27 953 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.23□□□□□ -0.45
USP6NL-202ENST00000379237 TRIM22Q8IYM9 498 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 HDLBPQ00341 1268 aaKnown RBP12.23□□□□□ -0.45
USP6NL-202ENST00000379237 NCAPHQ15003 741 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 WDR93Q6P2C0 686 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 TRIM58Q8NG06 486 aa12.23□□□□□ -0.45
USP6NL-202ENST00000379237 C21orf2O43822 256 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 COBLO75128 1261 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 DDR1Q08345 913 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 ADCY2Q08462 1091 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 DBN1Q16643 649 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 LMBR1Q8WVP7 490 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 CNKSR2Q8WXI2 1034 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 POLR3EQ9NVU0 708 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 SERTAD1Q9UHV2 236 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 RXRAP19793 462 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 CDC25CP30307 473 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 IARSP41252 1262 aaKnown RBP12.22□□□□□ -0.45
USP6NL-202ENST00000379237 TAF11Q15544 211 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 ARMC3Q5W041 872 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 PUS7Q96PZ0 661 aaKnown RBP12.22□□□□□ -0.45
USP6NL-202ENST00000379237 CTNND2Q9UQB3 1225 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 MFAP3LO75121 409 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 KRT14P02533 472 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 FKBP4Q02790 459 aaKnown RBP eCLIP12.22□□□□□ -0.45
USP6NL-202ENST00000379237 TDRD12Q587J7 1177 aaKnown RBP12.22□□□□□ -0.45
USP6NL-202ENST00000379237 FAM133BQ5BKY9 247 aaKnown RBP12.22□□□□□ -0.45
USP6NL-202ENST00000379237 CCNI2Q6ZMN8 369 aaPredicted RBP12.22□□□□□ -0.45
USP6NL-202ENST00000379237 HVCN1Q96D96 273 aa12.22□□□□□ -0.45
USP6NL-202ENST00000379237 DDX20Q9UHI6 824 aaKnown RBP12.22□□□□□ -0.45
USP6NL-202ENST00000379237 CCDC6Q16204 474 aa12.21□□□□□ -0.45
USP6NL-202ENST00000379237 A1CFQ9NQ94 594 aaKnown RBP12.21□□□□□ -0.45
USP6NL-202ENST00000379237 CEP131Q9UPN4 1083 aa12.21□□□□□ -0.45
USP6NL-202ENST00000379237 MYBL1P10243 752 aa12.21□□□□□ -0.45
USP6NL-202ENST00000379237 METAP2P50579 478 aaKnown RBP eCLIP12.21□□□□□ -0.45
USP6NL-202ENST00000379237 GUCY2DQ02846 1103 aa12.21□□□□□ -0.45
USP6NL-202ENST00000379237 NSRP1Q9H0G5 558 aaKnown RBP12.21□□□□□ -0.45
USP6NL-202ENST00000379237 ATP6V0A4Q9HBG4 840 aa12.21□□□□□ -0.45
USP6NL-202ENST00000379237 LUC7LQ9NQ29 371 aaKnown RBP12.21□□□□□ -0.45
USP6NL-202ENST00000379237 GJB4Q9NTQ9 266 aa12.21□□□□□ -0.45
USP6NL-202ENST00000379237 DIAPH2O60879 1101 aa12.21□□□□□ -0.45
USP6NL-202ENST00000379237 MYBL2P10244 700 aa12.21□□□□□ -0.45
USP6NL-202ENST00000379237 ARL8AQ96BM9 186 aa12.21□□□□□ -0.45
USP6NL-202ENST00000379237 SWAP70Q9UH65 585 aa12.21□□□□□ -0.45
USP6NL-202ENST00000379237 MAPK8IP1Q9UQF2 711 aa12.21□□□□□ -0.45
USP6NL-202ENST00000379237 TAF6LQ9Y6J9 622 aa12.21□□□□□ -0.45
USP6NL-202ENST00000379237 ZFYVE9O95405 1425 aa12.21□□□□□ -0.46
USP6NL-202ENST00000379237 ATP1A1P05023 1023 aaKnown RBP12.21□□□□□ -0.46
USP6NL-202ENST00000379237 CXCR5P32302 372 aa12.21□□□□□ -0.46
USP6NL-202ENST00000379237 AARSP49588 968 aaKnown RBP eCLIP12.21□□□□□ -0.46
USP6NL-202ENST00000379237 RUFY4Q6ZNE9 571 aa12.21□□□□□ -0.46
USP6NL-202ENST00000379237 GRAMD1CQ8IYS0 662 aa12.21□□□□□ -0.46
USP6NL-202ENST00000379237 KIAA0232Q92628 1395 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 ZPR1O75312 459 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 TAF5LO75529 589 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 SNX1Q13596 522 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 OR8K1Q8NGG5 319 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 HOOK2Q96ED9 719 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 OSBPL9Q96SU4 736 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 CARMIL3Q8ND23 1372 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 HIP1RO75146 1068 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 CYP21A2P08686 494 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 TRIM14Q14142 442 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 ENOX1Q8TC92 643 aaKnown RBP12.2□□□□□ -0.46
USP6NL-202ENST00000379237 RNPC3Q96LT9 517 aaKnown RBP12.2□□□□□ -0.46
USP6NL-202ENST00000379237 SLC26A6Q9BXS9 759 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 GNAT3A8MTJ3 354 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 PRC1O43663 620 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 CTNNA1P35221 906 aaKnown RBP12.2□□□□□ -0.46
USP6NL-202ENST00000379237 APBA1Q02410 837 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 DRP2Q13474 957 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 SLC39A14Q15043 492 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 THEMIS2Q5TEJ8 643 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 VPS37DQ86XT2 251 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 MSL3Q8N5Y2 521 aaKnown RBP12.2□□□□□ -0.46
USP6NL-202ENST00000379237 NOD2Q9HC29 1040 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 MAN1B1Q9UKM7 699 aa12.2□□□□□ -0.46
USP6NL-202ENST00000379237 MTIF2P46199 727 aaKnown RBP12.19□□□□□ -0.46
USP6NL-202ENST00000379237 EIF4A2Q14240 407 aaKnown RBP12.19□□□□□ -0.46
USP6NL-202ENST00000379237 KRT71Q3SY84 523 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms