RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 ERO1BQ86YB8 467 aa16.5■□□□□ 0.23
UPK1A-202ENST00000379013 SH3RF3Q8TEJ3 882 aaPredicted RBP16.5■□□□□ 0.23
UPK1A-202ENST00000379013 HOOK2Q96ED9 719 aa16.5■□□□□ 0.23
UPK1A-202ENST00000379013 ZNF341Q9BYN7 854 aa16.5■□□□□ 0.23
UPK1A-202ENST00000379013 DHX36Q9H2U1 1008 aaKnown RBP16.5■□□□□ 0.23
UPK1A-202ENST00000379013 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.5■□□□□ 0.23
UPK1A-202ENST00000379013 CSADQ9Y600 493 aa16.5■□□□□ 0.23
UPK1A-202ENST00000379013 RGS19P49795 217 aa16.49■□□□□ 0.23
UPK1A-202ENST00000379013 DYNLL1P63167 89 aaKnown RBP16.49■□□□□ 0.23
UPK1A-202ENST00000379013 PICALMQ13492 652 aa16.49■□□□□ 0.23
UPK1A-202ENST00000379013 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
UPK1A-202ENST00000379013 CCDC129Q6ZRS4 1044 aa16.49■□□□□ 0.23
UPK1A-202ENST00000379013 TGFBRAP1Q8WUH2 860 aa16.49■□□□□ 0.23
UPK1A-202ENST00000379013 BACH2Q9BYV9 841 aa16.49■□□□□ 0.23
UPK1A-202ENST00000379013 ZNF287Q9HBT7 754 aa16.49■□□□□ 0.23
UPK1A-202ENST00000379013 FLT1P17948 1338 aa16.48■□□□□ 0.23
UPK1A-202ENST00000379013 BTBD19C9JJ37 291 aa16.48■□□□□ 0.23
UPK1A-202ENST00000379013 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
UPK1A-202ENST00000379013 HLA-DOAP06340 250 aa16.48■□□□□ 0.23
UPK1A-202ENST00000379013 ZKSCAN1P17029 563 aaPredicted RBP16.48■□□□□ 0.23
UPK1A-202ENST00000379013 NT5C2P49902 561 aa16.48■□□□□ 0.23
UPK1A-202ENST00000379013 GTF2A2P52657 109 aa16.48■□□□□ 0.23
UPK1A-202ENST00000379013 SLFNL1Q499Z3 407 aa16.48■□□□□ 0.23
UPK1A-202ENST00000379013 TTC6Q86TZ1 520 aa16.48■□□□□ 0.23
UPK1A-202ENST00000379013 MAP4K1Q92918 833 aa16.48■□□□□ 0.23
UPK1A-202ENST00000379013 HPS5Q9UPZ3 1129 aa16.48■□□□□ 0.23
UPK1A-202ENST00000379013 FAM196BA6NMK8 535 aa16.47■□□□□ 0.23
UPK1A-202ENST00000379013 CHGBP05060 677 aa16.47■□□□□ 0.23
UPK1A-202ENST00000379013 PCP11498 1178 aaKnown RBP16.47■□□□□ 0.23
UPK1A-202ENST00000379013 PPIL2Q13356 520 aa16.47■□□□□ 0.23
UPK1A-202ENST00000379013 DCAF15Q66K64 600 aa16.47■□□□□ 0.23
UPK1A-202ENST00000379013 CCDC84Q86UT8 332 aaPredicted RBP16.47■□□□□ 0.23
UPK1A-202ENST00000379013 IFNL3Q8IZI9 196 aa16.47■□□□□ 0.23
UPK1A-202ENST00000379013 DCP1AQ9NPI6 582 aaPredicted RBP16.47■□□□□ 0.23
UPK1A-202ENST00000379013 MCM9Q9NXL9 1143 aa16.47■□□□□ 0.23
UPK1A-202ENST00000379013 GSG1L2A8MUP6 293 aa16.46■□□□□ 0.23
UPK1A-202ENST00000379013 POLR3DP05423 398 aaPredicted RBP16.46■□□□□ 0.23
UPK1A-202ENST00000379013 PPATQ06203 517 aa16.46■□□□□ 0.23
UPK1A-202ENST00000379013 NOL9Q5SY16 702 aaKnown RBP16.46■□□□□ 0.23
UPK1A-202ENST00000379013 ZSCAN29Q8IWY8 852 aaPredicted RBP16.46■□□□□ 0.23
UPK1A-202ENST00000379013 CD99L2Q8TCZ2 262 aa16.46■□□□□ 0.23
UPK1A-202ENST00000379013 SDR42E1Q8WUS8 393 aa16.46■□□□□ 0.23
UPK1A-202ENST00000379013 TRIM34Q9BYJ4 488 aa16.46■□□□□ 0.23
UPK1A-202ENST00000379013 LSG1Q9H089 658 aaKnown RBP16.46■□□□□ 0.23
UPK1A-202ENST00000379013 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
UPK1A-202ENST00000379013 ZNF213O14771 459 aa16.45■□□□□ 0.22
UPK1A-202ENST00000379013 SOX10P56693 466 aa16.45■□□□□ 0.22
UPK1A-202ENST00000379013 JAG1P78504 1218 aa16.45■□□□□ 0.22
UPK1A-202ENST00000379013 KRT32Q14532 448 aa16.45■□□□□ 0.22
UPK1A-202ENST00000379013 SBK1Q52WX2 424 aa16.45■□□□□ 0.22
UPK1A-202ENST00000379013 GPAT2Q6NUI2 795 aa16.45■□□□□ 0.22
UPK1A-202ENST00000379013 OTOP1Q7RTM1 612 aa16.45■□□□□ 0.22
UPK1A-202ENST00000379013 MAPKAPK5Q8IW41 473 aa16.45■□□□□ 0.22
UPK1A-202ENST00000379013 IL27Q8NEV9 243 aa16.45■□□□□ 0.22
UPK1A-202ENST00000379013 RNF41Q9H4P4 317 aaPredicted RBP16.45■□□□□ 0.22
UPK1A-202ENST00000379013 KCNH4Q9UQ05 1017 aa16.45■□□□□ 0.22
UPK1A-202ENST00000379013 RBM8AQ9Y5S9 174 aaKnown RBP16.45■□□□□ 0.22
UPK1A-202ENST00000379013 FGAP02671 866 aa16.44■□□□□ 0.22
UPK1A-202ENST00000379013 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
UPK1A-202ENST00000379013 VPS53Q5VIR6 699 aa16.44■□□□□ 0.22
UPK1A-202ENST00000379013 IL25Q9H293 177 aa16.44■□□□□ 0.22
UPK1A-202ENST00000379013 PRKAB2O43741 272 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 CETPP11597 493 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 PTPRAP18433 802 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 CTGFP29279 349 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 ANAPC15P60006 121 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 SP3Q02447 781 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 PDE4BQ07343 736 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 TRDNQ13061 729 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 TAF1CQ15572 869 aaPredicted RBP16.43■□□□□ 0.22
UPK1A-202ENST00000379013 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
UPK1A-202ENST00000379013 OTUD7BQ6GQQ9 843 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 USP26Q9BXU7 913 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 ARHGAP39Q9C0H5 1083 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 EHD4Q9H223 541 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 CNNM2Q9H8M5 875 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 EPB41L4AQ9HCS5 686 aaPredicted RBP16.43■□□□□ 0.22
UPK1A-202ENST00000379013 PI4KBQ9UBF8 816 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 SWAP70Q9UH65 585 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 TRIM17Q9Y577 477 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 ZHX2Q9Y6X8 837 aa16.43■□□□□ 0.22
UPK1A-202ENST00000379013 KIAA0100Q14667 2235 aaKnown RBP16.42■□□□□ 0.22
UPK1A-202ENST00000379013 ROBO3Q96MS0 1386 aa16.42■□□□□ 0.22
UPK1A-202ENST00000379013 HSPA4P34932 840 aa16.42■□□□□ 0.22
UPK1A-202ENST00000379013 PTH1RQ03431 593 aa16.42■□□□□ 0.22
UPK1A-202ENST00000379013 PKN2Q16513 984 aaKnown RBP16.42■□□□□ 0.22
UPK1A-202ENST00000379013 FBXO46Q6PJ61 603 aaPredicted RBP16.42■□□□□ 0.22
UPK1A-202ENST00000379013 CRACR2BQ8N4Y2 399 aaPredicted RBP16.42■□□□□ 0.22
UPK1A-202ENST00000379013 HERC5Q9UII4 1024 aaKnown RBP16.42■□□□□ 0.22
UPK1A-202ENST00000379013 ANAPC4Q9UJX5 808 aa16.42■□□□□ 0.22
UPK1A-202ENST00000379013 AFG3L2Q9Y4W6 797 aa16.42■□□□□ 0.22
UPK1A-202ENST00000379013 MINDY4BA8MYZ0 360 aa16.41■□□□□ 0.22
UPK1A-202ENST00000379013 USP17L12C9JPN9 530 aa16.41■□□□□ 0.22
UPK1A-202ENST00000379013 USP17L21D6R901 530 aa16.41■□□□□ 0.22
UPK1A-202ENST00000379013 TBC1D12O60347 775 aa16.41■□□□□ 0.22
UPK1A-202ENST00000379013 PPARAQ07869 468 aa16.41■□□□□ 0.22
UPK1A-202ENST00000379013 C12orf60Q5U649 245 aa16.41■□□□□ 0.22
UPK1A-202ENST00000379013 CTR9Q6PD62 1173 aa16.41■□□□□ 0.22
UPK1A-202ENST00000379013 FOXP4Q8IVH2 680 aaPredicted RBP16.41■□□□□ 0.22
UPK1A-202ENST00000379013 SCYL3Q8IZE3 742 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms