RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 AMPD2Q01433 879 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 AIMP1Q12904 312 aaKnown RBP9.3□□□□□ -0.92
PTPRR-203ENST00000378778 MCTP2Q6DN12 878 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 CCDC70Q6NSX1 233 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 LMOD2Q6P5Q4 547 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 APTXQ7Z2E3 356 aaKnown RBP9.3□□□□□ -0.92
PTPRR-203ENST00000378778 CCDC102AQ96A19 550 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 IQCDQ96DY2 449 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 LIMA1Q9UHB6 759 aaKnown RBP9.3□□□□□ -0.92
PTPRR-203ENST00000378778 A0A087WZG4 1122 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 ANO9A1A5B4 782 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 PRPF6O94906 941 aaKnown RBP9.3□□□□□ -0.92
PTPRR-203ENST00000378778 FGAP02671 866 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 BMP6P22004 513 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 FOXO4P98177 505 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 PDE4BQ07343 736 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 KARSQ15046 597 aaKnown RBP9.3□□□□□ -0.92
PTPRR-203ENST00000378778 TTF1Q15361 905 aaPredicted RBP9.3□□□□□ -0.92
PTPRR-203ENST00000378778 RAD9BQ6WBX8 426 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 AATFQ9NY61 560 aaKnown RBP eCLIP9.3□□□□□ -0.92
PTPRR-203ENST00000378778 FBXO2Q9UK22 296 aaPredicted RBP9.3□□□□□ -0.92
PTPRR-203ENST00000378778 SRRM3A6NNA2 597 aaPredicted RBP9.29□□□□□ -0.92
PTPRR-203ENST00000378778 FMNL1O95466 1100 aaPredicted RBP9.29□□□□□ -0.92
PTPRR-203ENST00000378778 IFNAR1P17181 557 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 VSNL1P62760 191 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 SSRP1Q08945 709 aaKnown RBP9.29□□□□□ -0.92
PTPRR-203ENST00000378778 OTUD7BQ6GQQ9 843 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 TMED8Q6PL24 325 aaPredicted RBP9.29□□□□□ -0.92
PTPRR-203ENST00000378778 TRAPPC11Q7Z392 1133 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 THEMISQ8N1K5 641 aaPredicted RBP9.29□□□□□ -0.92
PTPRR-203ENST00000378778 OSBP2Q969R2 916 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 EPC1Q9H2F5 836 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 FAM204AQ9H8W3 233 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 A1CFQ9NQ94 594 aaKnown RBP9.29□□□□□ -0.92
PTPRR-203ENST00000378778 CHD4Q14839 1912 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 PKD1L3Q7Z443 1732 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 SYNRGQ9UMZ2 1314 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 CCDC196A0A1B0GTZ2 297 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 ZBTB43O43298 467 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 ACTN4O43707 911 aaKnown RBP9.29□□□□□ -0.92
PTPRR-203ENST00000378778 RNF40O75150 1001 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 PPFIA1Q13136 1202 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 CUL4BQ13620 913 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 APOA5Q6Q788 366 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 LMBR1LQ6UX01 489 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 SLC35F6Q8N357 371 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 COG1Q8WTW3 980 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 FERMT2Q96AC1 680 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 NEUROD6Q96NK8 337 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 CNNM2Q9H8M5 875 aa9.29□□□□□ -0.92
PTPRR-203ENST00000378778 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.28□□□□□ -0.92
PTPRR-203ENST00000378778 SOWAHDA6NJG2 315 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 GOLGA8KD6RF30 607 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 FMR1Q06787 632 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTPRR-203ENST00000378778 RBL2Q08999 1139 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 NTRK3Q16288 839 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 PAPD7Q5XG87 772 aaKnown RBP9.28□□□□□ -0.92
PTPRR-203ENST00000378778 SH3RF1Q7Z6J0 888 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 PACS2Q86VP3 889 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 AMOTL1Q8IY63 956 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 TRIM22Q8IYM9 498 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 TMTC2Q8N394 836 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 SMARCC1Q92922 1105 aaPredicted RBP9.28□□□□□ -0.92
PTPRR-203ENST00000378778 CWC25Q9NXE8 425 aaPredicted RBP9.28□□□□□ -0.92
PTPRR-203ENST00000378778 CEP126Q9P2H0 1117 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 PUF60Q9UHX1 559 aaKnown RBP9.28□□□□□ -0.92
PTPRR-203ENST00000378778 HPCAL4Q9UM19 191 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 EBAG9O00559 213 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 OPA1O60313 960 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 MMP1P03956 469 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 EPB41P11171 864 aaKnown RBP9.28□□□□□ -0.92
PTPRR-203ENST00000378778 MMP14P50281 582 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 KRT83P78385 493 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 APBA1Q02410 837 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 STIM1Q13586 685 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 B4GALNT4Q76KP1 1039 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 TEX2Q8IWB9 1127 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 FAM76AQ8TAV0 307 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 DESI2Q9BSY9 194 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 LZTFL1Q9NQ48 299 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 GGA2Q9UJY4 613 aa9.28□□□□□ -0.92
PTPRR-203ENST00000378778 CDHR2Q9BYE9 1310 aa9.27□□□□□ -0.92
PTPRR-203ENST00000378778 FOXP2O15409 715 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 CDC27P30260 824 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 GSCP56915 257 aaPredicted RBP9.27□□□□□ -0.93
PTPRR-203ENST00000378778 MLECQ14165 292 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 UBE3CQ15386 1083 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 ZNF572Q7Z3I7 529 aaPredicted RBP9.27□□□□□ -0.93
PTPRR-203ENST00000378778 STK11IPQ8N1F8 1099 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 CRACR2AQ9BSW2 395 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 PAGR1Q9BTK6 254 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 TEX13AQ9BXU3 409 aaPredicted RBP9.27□□□□□ -0.93
PTPRR-203ENST00000378778 ZNF219Q9P2Y4 722 aaPredicted RBP9.27□□□□□ -0.93
PTPRR-203ENST00000378778 DISP2A7MBM2 1401 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 GLI3P10071 1580 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 A0A1W2PQC6 194 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 SHTN1A0MZ66 631 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 GOLGA8AA7E2F4 631 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 ZEB2O60315 1214 aa9.27□□□□□ -0.93
PTPRR-203ENST00000378778 SYF2O95926 243 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms