RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 TMEM63CQ9P1W3 806 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 STK36Q9NRP7 1315 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 RASA1P20936 1047 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 CRKP46108 304 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 NT5C2P49902 561 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 UBE2HP62256 183 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 CSPP1Q1MSJ5 1256 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 CDC42EP5Q6NZY7 148 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 C16orf86Q6ZW13 317 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 RTKN2Q8IZC4 609 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 PSMD1Q99460 953 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 SLC26A6Q9BXS9 759 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 MKNK2Q9HBH9 465 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 USP40Q9NVE5 1235 aa20.22■□□□□ 0.83
THUMPD2-201ENST00000378727 PSME4Q14997 1843 aa20.21■□□□□ 0.83
THUMPD2-201ENST00000378727 SSRP1Q08945 709 aaKnown RBP20.21■□□□□ 0.83
THUMPD2-201ENST00000378727 CATIPQ7Z7H3 387 aa20.21■□□□□ 0.83
THUMPD2-201ENST00000378727 CMTR1Q8N1G2 835 aaKnown RBP20.21■□□□□ 0.83
THUMPD2-201ENST00000378727 RGS22Q8NE09 1264 aa20.21■□□□□ 0.83
THUMPD2-201ENST00000378727 MTFR1LQ9H019 292 aa20.21■□□□□ 0.83
THUMPD2-201ENST00000378727 ELP1O95163 1332 aa20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 CCDC196A0A1B0GTZ2 297 aa20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 FSD2A1L4K1 749 aa20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 CDK8P49336 464 aa20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 PICALMQ13492 652 aa20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 ZDHHC15Q96MV8 337 aa20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 MRIQ9BWK5 157 aa20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 PCDHAC2Q9Y5I4 1007 aa20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 COL4A5P29400 1685 aa20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 DDAH1O94760 285 aa20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 PPP2R5BQ15173 497 aa20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 ZSCAN23Q3MJ62 389 aa20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 CRACR2BQ8N4Y2 399 aaPredicted RBP20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 SCAND2PQ9GZW5 306 aaPredicted RBP20.2■□□□□ 0.82
THUMPD2-201ENST00000378727 GUCY1A2P33402 732 aa20.19■□□□□ 0.82
THUMPD2-201ENST00000378727 LEO1Q8WVC0 666 aaPredicted RBP20.19■□□□□ 0.82
THUMPD2-201ENST00000378727 TGFB2P61812 414 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 HDLBPQ00341 1268 aaKnown RBP20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 R3HDM1Q15032 1099 aaKnown RBP20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 ZNF444Q8N0Y2 327 aaPredicted RBP20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 CCDC82Q8N4S0 544 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 ANKS1AQ92625 1134 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 MYH6P13533 1939 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 BRCA1P38398 1863 aaKnown RBP20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 CALM1P0DP23 149 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 CALM2P0DP24 149 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 CALM3P0DP25 149 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 POLD1P28340 1107 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 FUT2Q10981 343 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 KRT40Q6A162 431 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 GAS2L3Q86XJ1 694 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 DGKHQ86XP1 1220 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 SPATA32Q96LK8 384 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 TCP11L1Q9NUJ3 509 aa20.18■□□□□ 0.82
THUMPD2-201ENST00000378727 KIF28PB7ZC32 967 aa20.17■□□□□ 0.82
THUMPD2-201ENST00000378727 TSPY3P0CV98 308 aa20.17■□□□□ 0.82
THUMPD2-201ENST00000378727 TSPY8P0CW00 308 aa20.17■□□□□ 0.82
THUMPD2-201ENST00000378727 KIF23Q02241 960 aaPredicted RBP20.17■□□□□ 0.82
THUMPD2-201ENST00000378727 TPRNQ4KMQ1 711 aa20.17■□□□□ 0.82
THUMPD2-201ENST00000378727 ZNF287Q9HBT7 754 aa20.17■□□□□ 0.82
THUMPD2-201ENST00000378727 ZNF277Q9NRM2 450 aaPredicted RBP20.17■□□□□ 0.82
THUMPD2-201ENST00000378727 PIM2Q9P1W9 311 aa20.17■□□□□ 0.82
THUMPD2-201ENST00000378727 NFIAQ12857 509 aa20.17■□□□□ 0.82
THUMPD2-201ENST00000378727 TRIM22Q8IYM9 498 aa20.17■□□□□ 0.82
THUMPD2-201ENST00000378727 FTOQ9C0B1 505 aaKnown RBP eCLIP20.17■□□□□ 0.82
THUMPD2-201ENST00000378727 PLEKHA8P1O95397 391 aa20.16■□□□□ 0.82
THUMPD2-201ENST00000378727 ZNF445P59923 1031 aa20.16■□□□□ 0.82
THUMPD2-201ENST00000378727 GABPAQ06546 454 aa20.16■□□□□ 0.82
THUMPD2-201ENST00000378727 USP28Q96RU2 1077 aa20.16■□□□□ 0.82
THUMPD2-201ENST00000378727 OSBPL5Q9H0X9 879 aaPredicted RBP20.16■□□□□ 0.82
THUMPD2-201ENST00000378727 RBM28Q9NW13 759 aaKnown RBP20.16■□□□□ 0.82
THUMPD2-201ENST00000378727 CFAP45Q9UL16 551 aa20.16■□□□□ 0.82
THUMPD2-201ENST00000378727 GOLGA6L3A6NEY3 463 aa20.15■□□□□ 0.82
THUMPD2-201ENST00000378727 WASF1Q92558 559 aa20.15■□□□□ 0.82
THUMPD2-201ENST00000378727 SERPINA10Q9UK55 444 aa20.15■□□□□ 0.82
THUMPD2-201ENST00000378727 DEXIO95424 95 aa20.15■□□□□ 0.82
THUMPD2-201ENST00000378727 ATL3Q6DD88 541 aa20.15■□□□□ 0.82
THUMPD2-201ENST00000378727 TMTC3Q6ZXV5 915 aa20.15■□□□□ 0.82
THUMPD2-201ENST00000378727 LARGE2Q8N3Y3 721 aa20.15■□□□□ 0.82
THUMPD2-201ENST00000378727 SGIP1Q9BQI5 828 aa20.15■□□□□ 0.82
THUMPD2-201ENST00000378727 RNF26Q9BY78 433 aaPredicted RBP20.15■□□□□ 0.82
THUMPD2-201ENST00000378727 TAOK2Q9UL54 1235 aa20.15■□□□□ 0.82
THUMPD2-201ENST00000378727 CEBPZQ03701 1054 aaKnown RBP20.14■□□□□ 0.81
THUMPD2-201ENST00000378727 CCDC178Q5BJE1 867 aa20.14■□□□□ 0.81
THUMPD2-201ENST00000378727 BRAPQ7Z569 592 aa20.14■□□□□ 0.81
THUMPD2-201ENST00000378727 NEDD1Q8NHV4 660 aa20.14■□□□□ 0.81
THUMPD2-201ENST00000378727 KAT14Q9H8E8 782 aa20.14■□□□□ 0.81
THUMPD2-201ENST00000378727 MYH8P13535 1937 aa20.14■□□□□ 0.81
THUMPD2-201ENST00000378727 RBM5P52756 815 aaKnown RBP eCLIP20.14■□□□□ 0.81
THUMPD2-201ENST00000378727 ZFPM1Q8IX07 1006 aa20.14■□□□□ 0.81
THUMPD2-201ENST00000378727 PNMA1Q8ND90 353 aa20.14■□□□□ 0.81
THUMPD2-201ENST00000378727 PGBD1Q96JS3 809 aa20.14■□□□□ 0.81
THUMPD2-201ENST00000378727 ZNF396Q96N95 335 aaPredicted RBP20.14■□□□□ 0.81
THUMPD2-201ENST00000378727 RCOR1Q9UKL0 485 aa20.14■□□□□ 0.81
THUMPD2-201ENST00000378727 CACNB3P54284 484 aa20.13■□□□□ 0.81
THUMPD2-201ENST00000378727 PKN1Q16512 942 aa20.13■□□□□ 0.81
THUMPD2-201ENST00000378727 SOGA3Q5TF21 947 aa20.13■□□□□ 0.81
THUMPD2-201ENST00000378727 CTCFLQ8NI51 663 aaPredicted RBP20.13■□□□□ 0.81
THUMPD2-201ENST00000378727 UPF1Q92900 1129 aaKnown RBP eCLIP20.13■□□□□ 0.81
THUMPD2-201ENST00000378727 FER1L6Q2WGJ9 1857 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms