RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 KRT23Q9C075 422 aa17.64■□□□□ 0.41
RER1-203ENST00000378513 WDR19Q8NEZ3 1342 aa17.63■□□□□ 0.41
RER1-203ENST00000378513 C4AP0C0L4 1744 aa17.63■□□□□ 0.41
RER1-203ENST00000378513 C4BP0C0L5 1744 aa17.63■□□□□ 0.41
RER1-203ENST00000378513 MYH7P12883 1935 aa17.63■□□□□ 0.41
RER1-203ENST00000378513 EIF5P55010 431 aaKnown RBP17.63■□□□□ 0.41
RER1-203ENST00000378513 ZNF512BQ96KM6 892 aaPredicted RBP17.63■□□□□ 0.41
RER1-203ENST00000378513 NUTM2BA6NNL0 878 aaPredicted RBP17.63■□□□□ 0.41
RER1-203ENST00000378513 NUTM2EB1AL46 878 aaPredicted RBP17.63■□□□□ 0.41
RER1-203ENST00000378513 NUTM2AQ8IVF1 878 aaPredicted RBP17.63■□□□□ 0.41
RER1-203ENST00000378513 SPEF2Q9C093 1822 aa17.63■□□□□ 0.41
RER1-203ENST00000378513 ZSWIM4Q9H7M6 989 aa17.63■□□□□ 0.41
RER1-203ENST00000378513 TFCP2L1Q9NZI6 479 aa17.63■□□□□ 0.41
RER1-203ENST00000378513 IKBKBO14920 756 aa17.62■□□□□ 0.41
RER1-203ENST00000378513 TOGARAM2Q6ZUX3 1019 aa17.62■□□□□ 0.41
RER1-203ENST00000378513 CCDC87Q9NVE4 849 aa17.62■□□□□ 0.41
RER1-203ENST00000378513 TICAM2Q86XR7 235 aa17.62■□□□□ 0.41
RER1-203ENST00000378513 VSTM4Q8IW00 320 aa17.62■□□□□ 0.41
RER1-203ENST00000378513 SMARCE1Q969G3 411 aa17.62■□□□□ 0.41
RER1-203ENST00000378513 MAGEB6P1A0A0J9YX57 407 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 TEX33O43247 280 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 MDM2Q00987 491 aaPredicted RBP17.61■□□□□ 0.41
RER1-203ENST00000378513 AKAP17AQ02040 695 aaKnown RBP17.61■□□□□ 0.41
RER1-203ENST00000378513 CCDC152Q4G0S7 254 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 ENAHQ8N8S7 591 aaPredicted RBP17.61■□□□□ 0.41
RER1-203ENST00000378513 TIGD1Q96MW7 591 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 BLZF1Q9H2G9 400 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 MAPK8IP1Q9UQF2 711 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 COL4A1P02462 1669 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 CYP2D6P10635 497 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 CNNM2Q9H8M5 875 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.61■□□□□ 0.41
RER1-203ENST00000378513 ZNF446Q9NWS9 450 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 DDX41Q9UJV9 622 aaKnown RBP17.61■□□□□ 0.41
RER1-203ENST00000378513 LOC102724428A0A0B4J2F2 783 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 PTPREP23469 700 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 GTF2E1P29083 439 aaPredicted RBP17.61■□□□□ 0.41
RER1-203ENST00000378513 SIK1P57059 783 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 ALX1Q15699 326 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 ARHGAP29Q52LW3 1261 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 STAG1Q8WVM7 1258 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 ERO1AQ96HE7 468 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 CARD6Q9BX69 1037 aa17.61■□□□□ 0.41
RER1-203ENST00000378513 CAMTA2O94983 1202 aa17.6■□□□□ 0.41
RER1-203ENST00000378513 KRT222Q8N1A0 295 aa17.6■□□□□ 0.41
RER1-203ENST00000378513 WDR24Q96S15 920 aa17.6■□□□□ 0.41
RER1-203ENST00000378513 ATRNO75882 1429 aa17.6■□□□□ 0.41
RER1-203ENST00000378513 PAPPAQ13219 1627 aa17.6■□□□□ 0.41
RER1-203ENST00000378513 VWA3AA6NCI4 1184 aa17.6■□□□□ 0.41
RER1-203ENST00000378513 ERVV-1B6SEH8 477 aa17.6■□□□□ 0.41
RER1-203ENST00000378513 NRDCO43847 1150 aa17.6■□□□□ 0.41
RER1-203ENST00000378513 DEXIO95424 95 aa17.6■□□□□ 0.41
RER1-203ENST00000378513 ZNF384Q8TF68 577 aa17.6■□□□□ 0.41
RER1-203ENST00000378513 USP17L12C9JPN9 530 aa17.59■□□□□ 0.41
RER1-203ENST00000378513 USP17L21D6R901 530 aa17.59■□□□□ 0.41
RER1-203ENST00000378513 CD44P16070 742 aaKnown RBP17.59■□□□□ 0.41
RER1-203ENST00000378513 AATFQ9NY61 560 aaKnown RBP eCLIP17.59■□□□□ 0.419e-8■□□□□ 9.1
RER1-203ENST00000378513 ETF1P62495 437 aaKnown RBP17.59■□□□□ 0.41
RER1-203ENST00000378513 PTF1AQ7RTS3 328 aa17.59■□□□□ 0.41
RER1-203ENST00000378513 ZNF397Q8NF99 534 aaPredicted RBP17.59■□□□□ 0.41
RER1-203ENST00000378513 CELF1Q92879 486 aaKnown RBP17.59■□□□□ 0.41
RER1-203ENST00000378513 EEF2KMTQ96G04 330 aa17.59■□□□□ 0.41
RER1-203ENST00000378513 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.59■□□□□ 0.411e-6■□□□□ 10.9
RER1-203ENST00000378513 POLR3GO15318 223 aaPredicted RBP17.58■□□□□ 0.41
RER1-203ENST00000378513 NTSR2O95665 410 aa17.58■□□□□ 0.41
RER1-203ENST00000378513 TFRCP02786 760 aaKnown RBP17.58■□□□□ 0.41
RER1-203ENST00000378513 GNG11P61952 73 aa17.58■□□□□ 0.41
RER1-203ENST00000378513 IFIT1BQ5T764 474 aaKnown RBP17.58■□□□□ 0.41
RER1-203ENST00000378513 TRIM65Q6PJ69 517 aa17.58■□□□□ 0.41
RER1-203ENST00000378513 REXO1L1PQ8IX06 675 aa17.58■□□□□ 0.41
RER1-203ENST00000378513 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.41
RER1-203ENST00000378513 TAF1P21675 1872 aa17.58■□□□□ 0.4
RER1-203ENST00000378513 SEC31AO94979 1220 aaKnown RBP17.58■□□□□ 0.4
RER1-203ENST00000378513 SLFN14P0C7P3 912 aa17.58■□□□□ 0.4
RER1-203ENST00000378513 PKN1Q16512 942 aa17.58■□□□□ 0.4
RER1-203ENST00000378513 RILPL1Q5EBL4 403 aa17.58■□□□□ 0.4
RER1-203ENST00000378513 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.4
RER1-203ENST00000378513 XIRP1Q702N8 1843 aaKnown RBP17.58■□□□□ 0.4
RER1-203ENST00000378513 NUP98P52948 1817 aa17.58■□□□□ 0.4
RER1-203ENST00000378513 ACTN4O43707 911 aaKnown RBP17.58■□□□□ 0.4
RER1-203ENST00000378513 DDB1Q16531 1140 aa17.58■□□□□ 0.4
RER1-203ENST00000378513 WASF1Q92558 559 aa17.58■□□□□ 0.4
RER1-203ENST00000378513 PLIN2Q99541 437 aa17.58■□□□□ 0.4
RER1-203ENST00000378513 BAG1Q99933 345 aaPredicted RBP17.58■□□□□ 0.4
RER1-203ENST00000378513 LZTFL1Q9NQ48 299 aa17.58■□□□□ 0.4
RER1-203ENST00000378513 PPP2R2CQ9Y2T4 447 aa17.58■□□□□ 0.4
RER1-203ENST00000378513 CCT6AP40227 531 aaKnown RBP17.57■□□□□ 0.4
RER1-203ENST00000378513 RASGRP4Q8TDF6 673 aa17.57■□□□□ 0.4
RER1-203ENST00000378513 ESR2Q92731 530 aa17.57■□□□□ 0.4
RER1-203ENST00000378513 PSDA5PKW4 1024 aaPredicted RBP17.57■□□□□ 0.4
RER1-203ENST00000378513 SOWAHDA6NJG2 315 aa17.57■□□□□ 0.4
RER1-203ENST00000378513 CBFA2T2O43439 604 aa17.57■□□□□ 0.4
RER1-203ENST00000378513 FAM182BQ5T319 152 aa17.57■□□□□ 0.4
RER1-203ENST00000378513 TMEM139Q8IV31 216 aa17.57■□□□□ 0.4
RER1-203ENST00000378513 MARCH10Q8NA82 808 aaPredicted RBP17.57■□□□□ 0.4
RER1-203ENST00000378513 ZFP91Q96JP5 570 aaPredicted RBP17.57■□□□□ 0.4
RER1-203ENST00000378513 ITGB4P16144 1822 aa17.56■□□□□ 0.4
RER1-203ENST00000378513 TRIM75PA6NK02 468 aa17.56■□□□□ 0.4
RER1-203ENST00000378513 SEC23AQ15436 765 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms