RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 CHST3Q7LGC8 479 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 TMEM110Q86TL2 294 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 FOCADQ5VW36 1801 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 IFIT3O14879 490 aaKnown RBP12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 PPFIA2O75334 1257 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 KIF4AO95239 1232 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 PDCP20941 246 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 CLNS1AP54105 237 aaKnown RBP12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 APBB1IPQ7Z5R6 666 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 TTC30AQ86WT1 665 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 CD248Q9HCU0 757 aa12.31□□□□□ -0.44
PCDHGA1-201ENST00000378105 NAT2P11245 290 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 HNRNPH1P31943 449 aaKnown RBP12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 LRRC24Q50LG9 513 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 CCDC129Q6ZRS4 1044 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 CEP57Q86XR8 500 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 SUGP1Q8IWZ8 645 aaKnown RBP12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 TEX11Q8IYF3 940 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 ZNF444Q8N0Y2 327 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 MAGEB6Q8N7X4 407 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 KAT2BQ92831 832 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 XAGE2Q96GT9 111 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 GJD4Q96KN9 370 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 ESYT1Q9BSJ8 1104 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 RBM8AQ9Y5S9 174 aaKnown RBP12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 MAP3K15Q6ZN16 1313 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 RPSAP08865 295 aaKnown RBP12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 FHOD1Q9Y613 1164 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 DDX60LQ5H9U9 1706 aaKnown RBP12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 DTNBO60941 627 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 RWDD2BP57060 319 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 TRAF1Q13077 416 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 MYBPC2Q14324 1141 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 GIGYF2Q6Y7W6 1299 aaKnown RBP12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 MICU3Q86XE3 530 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 MSL3Q8N5Y2 521 aaKnown RBP12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 TRIML1Q8N9V2 468 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 ARMC2Q8NEN0 867 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 BICD1Q96G01 975 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 EPC1Q9H2F5 836 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 SLC4A4Q9Y6R1 1079 aa12.3□□□□□ -0.44
PCDHGA1-201ENST00000378105 DYTNA2CJ06 578 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 PHACTR2O75167 634 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 CLCN6P51797 869 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 PUS3Q9BZE2 481 aaKnown RBP12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 GREM2Q9H772 168 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 STX8Q9UNK0 236 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 SNED1Q8TER0 1413 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 NRDCO43847 1150 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 E2F5Q15329 346 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 CCDC73Q6ZRK6 1079 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 SYNE4Q8N205 404 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 PHACTR1Q9C0D0 580 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 JCADQ9P266 1359 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 BECN2A8MW95 431 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 BAG3O95817 575 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 LDHCP07864 332 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 SCRN1Q12765 414 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 ARPC5LQ9BPX5 153 aa12.29□□□□□ -0.44
PCDHGA1-201ENST00000378105 IL6STP40189 918 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 HLFQ16534 295 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 SPDYE1Q8NFV5 336 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 SDF4Q9BRK5 362 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 TSPY2A6NKD2 308 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 CPA1P15085 419 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 ACTN2P35609 894 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 RPS8P62241 208 aaKnown RBP12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 MCMDC2Q4G0Z9 681 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 THEMIS2Q5TEJ8 643 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 IQCA1Q86XH1 822 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 CCAR1Q8IX12 1150 aaKnown RBP12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 EAF2Q96CJ1 260 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 ERLIN2O94905 339 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 CTSWP56202 376 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 NECAB1Q8N987 351 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 BRF1Q92994 677 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 ODF2LQ9ULJ1 636 aa12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 IBTKQ9P2D0 1353 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA1-201ENST00000378105 CAVIN2O95810 425 aa12.27□□□□□ -0.44
PCDHGA1-201ENST00000378105 SETSIPP0DME0 302 aa12.27□□□□□ -0.44
PCDHGA1-201ENST00000378105 ACTN3Q08043 901 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA1-201ENST00000378105 TTLL12Q14166 644 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA1-201ENST00000378105 STK38Q15208 465 aa12.27□□□□□ -0.44
PCDHGA1-201ENST00000378105 ZNF804AQ7Z570 1209 aa12.27□□□□□ -0.44
PCDHGA1-201ENST00000378105 C14orf80Q86SX3 495 aa12.27□□□□□ -0.44
PCDHGA1-201ENST00000378105 ZBTB38Q8NAP3 1195 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA1-201ENST00000378105 SEC31BQ9NQW1 1179 aa12.27□□□□□ -0.44
PCDHGA1-201ENST00000378105 ADAM21Q9UKJ8 722 aa12.27□□□□□ -0.44
PCDHGA1-201ENST00000378105 GOLGA8BA8MQT2 603 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 ARHGAP29Q52LW3 1261 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 FAM227BQ96M60 508 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 NEK1Q96PY6 1258 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 BLOC1S6Q9UL45 172 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 CEP135Q66GS9 1140 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 TMC6Q7Z403 805 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 HOOK3Q86VS8 718 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 LRRN4CLQ8ND94 238 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 VAT1LQ9HCJ6 419 aa12.27□□□□□ -0.45
PCDHGA1-201ENST00000378105 THRAP3Q9Y2W1 955 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms