RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SPATS2LQ9NUQ6 558 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 NESP48681 1621 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 KIAA0391O15091 583 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 TBC1D8BQ0IIM8 1120 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 PLCB4Q15147 1175 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 TMOD3Q9NYL9 352 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 RPL26L1Q9UNX3 145 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 UBE4BO95155 1302 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 IGSF1Q8N6C5 1336 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 LRRC59Q96AG4 307 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 EXOC7Q9UPT5 735 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 THRAP3Q9Y2W1 955 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 THAP9Q9H5L6 903 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 JADE2Q9NQC1 790 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 FKBP3Q00688 224 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 PLA2G12BQ9BX93 195 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 MTMR6Q9Y217 621 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 STK36Q9NRP7 1315 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 GRID2IPA4D2P6 1211 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 NBPF20Q3BBV1 942 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 ZBTB38Q8NAP3 1195 aaPredicted RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 SARNPP82979 210 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 GOLGA8BA8MQT2 603 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 ACTN2P35609 894 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 MAP7Q14244 749 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 RWDD2AQ9UIY3 292 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 ENOSF1Q7L5Y1 443 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 KIAA1586Q9HCI6 787 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 TMEM2Q9UHN6 1383 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 CCDC14Q49A88 953 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 PPP1R21Q6ZMI0 780 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 FRMD4BQ9Y2L6 1034 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 CETN3O15182 167 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 UBL4BQ8N7F7 174 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 TNRQ92752 1358 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 KCNB1Q14721 858 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 GKAP1Q5VSY0 366 aaPredicted RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 KRT26Q7Z3Y9 468 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 YTHDF3Q7Z739 585 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 TRIM42Q8IWZ5 723 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 KYAT1Q16773 422 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 E7ENQ6 273 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 STAMBPO95630 424 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 CCDC129Q6ZRS4 1044 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 PHLDB2Q86SQ0 1253 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 NLRP3Q96P20 1036 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 SEC62Q99442 399 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 NDUFA13Q9P0J0 144 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 DDAH1O94760 285 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 C6orf118Q5T5N4 469 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 GRK7Q8WTQ7 553 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 ZBED6P86452 979 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 GPATCH4Q5T3I0 446 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 MAP3K20Q9NYL2 800 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 MIF4GDA9UHW6 222 aaKnown RBP5.51□□□□□ -1.53
PCDH9-201ENST00000377861 PHLDB3Q6NSJ2 640 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 ALG1Q9BT22 464 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 SENP1Q9P0U3 644 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 PLXNC1O60486 1568 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 SAMD9LQ8IVG5 1584 aa5.51□□□□□ -1.53
PCDH9-201ENST00000377861 BRF1Q92994 677 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 EYA1Q99502 592 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 PLA2R1Q13018 1463 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 ANKARQ7Z5J8 1434 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 ZMYM6O95789 1325 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 DNM1Q05193 864 aaKnown RBP5.5□□□□□ -1.53
PCDH9-201ENST00000377861 CCDC43Q96MW1 224 aaKnown RBP5.5□□□□□ -1.53
PCDH9-201ENST00000377861 LIG1P18858 919 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 AGXT2Q9BYV1 514 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 U2AF2P26368 475 aaKnown RBP eCLIP5.5□□□□□ -1.53
PCDH9-201ENST00000377861 IFIT1BQ5T764 474 aaKnown RBP5.5□□□□□ -1.53
PCDH9-201ENST00000377861 LINC00301Q8NCQ3 95 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 WDHD1O75717 1129 aaPredicted RBP5.5□□□□□ -1.53
PCDH9-201ENST00000377861 GAS8O95995 478 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 PCCAP05165 728 aaPredicted RBP5.5□□□□□ -1.53
PCDH9-201ENST00000377861 HOXC9P31274 260 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 ATP11AP98196 1134 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 CCDC121Q6ZUS5 278 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 SEL1LQ9UBV2 794 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 COL4A3BPQ9Y5P4 624 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 RBSNQ9H1K0 784 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 WDR93Q6P2C0 686 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 PHACTR3Q96KR7 559 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 DNMT1P26358 1616 aaKnown RBP5.5□□□□□ -1.53
PCDH9-201ENST00000377861 MEIS3Q99687 375 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 CBX8Q9HC52 389 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 KDRP35968 1356 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 ENO4A6NNW6 628 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 C16orf45Q96MC5 204 aaPredicted RBP5.5□□□□□ -1.53
PCDH9-201ENST00000377861 ZHX2Q9Y6X8 837 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 KRT2P35908 639 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 ZSCAN26Q16670 478 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 BYSLQ13895 437 aaKnown RBP5.5□□□□□ -1.53
PCDH9-201ENST00000377861 IGSF22Q8N9C0 903 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 ITIH6Q6UXX5 1313 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 BOLA2Q9H3K6 86 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 RABL6Q3YEC7 729 aaPredicted RBP5.5□□□□□ -1.53
PCDH9-201ENST00000377861 NECTIN2Q92692 538 aa5.5□□□□□ -1.53
PCDH9-201ENST00000377861 CTDP1Q9Y5B0 961 aaPredicted RBP5.5□□□□□ -1.53
PCDH9-201ENST00000377861 PTCH1Q13635 1447 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms