RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 CHMP4BQ9H444 224 aaKnown RBP21.7■■□□□ 1.06
COMMD6-202ENST00000377612 GABRQQ9UN88 632 aa21.7■■□□□ 1.06
COMMD6-202ENST00000377612 COL11A1P12107 1806 aaPredicted RBP21.7■■□□□ 1.06
COMMD6-202ENST00000377612 MYPNQ86TC9 1320 aa21.7■■□□□ 1.06
COMMD6-202ENST00000377612 GNRH1P01148 92 aa21.69■■□□□ 1.06
COMMD6-202ENST00000377612 HLA-DOAP06340 250 aa21.69■■□□□ 1.06
COMMD6-202ENST00000377612 EN2P19622 333 aaPredicted RBP21.69■■□□□ 1.06
COMMD6-202ENST00000377612 PRKCZQ05513 592 aa21.69■■□□□ 1.06
COMMD6-202ENST00000377612 TTF1Q15361 905 aaPredicted RBP21.69■■□□□ 1.06
COMMD6-202ENST00000377612 SLC9C2Q5TAH2 1124 aa21.69■■□□□ 1.06
COMMD6-202ENST00000377612 LCORLQ8N3X6 602 aa21.69■■□□□ 1.06
COMMD6-202ENST00000377612 TBC1D2Q9BYX2 928 aa21.69■■□□□ 1.06
COMMD6-202ENST00000377612 MAGEB6P1A0A0J9YX57 407 aa21.68■■□□□ 1.06
COMMD6-202ENST00000377612 FMNL1O95466 1100 aaPredicted RBP21.68■■□□□ 1.06
COMMD6-202ENST00000377612 MYCP01106 439 aaPredicted RBP21.68■■□□□ 1.06
COMMD6-202ENST00000377612 ASNSP08243 561 aa21.68■■□□□ 1.06
COMMD6-202ENST00000377612 ATP5JP18859 108 aa21.68■■□□□ 1.06
COMMD6-202ENST00000377612 PLCD1P51178 756 aa21.68■■□□□ 1.06
COMMD6-202ENST00000377612 PRMT2P55345 433 aa21.68■■□□□ 1.06
COMMD6-202ENST00000377612 TMED8Q6PL24 325 aaPredicted RBP21.68■■□□□ 1.06
COMMD6-202ENST00000377612 SMCR8Q8TEV9 937 aaPredicted RBP21.68■■□□□ 1.06
COMMD6-202ENST00000377612 EHD4Q9H223 541 aa21.68■■□□□ 1.06
COMMD6-202ENST00000377612 PAG1Q9NWQ8 432 aa21.68■■□□□ 1.06
COMMD6-202ENST00000377612 FCGRTP55899 365 aa21.67■■□□□ 1.06
COMMD6-202ENST00000377612 TATDN1Q6P1N9 297 aa21.67■■□□□ 1.06
COMMD6-202ENST00000377612 CERS3Q8IU89 383 aa21.67■■□□□ 1.06
COMMD6-202ENST00000377612 ANKRD13CQ8N6S4 541 aa21.67■■□□□ 1.06
COMMD6-202ENST00000377612 HAUS7Q99871 368 aa21.67■■□□□ 1.06
COMMD6-202ENST00000377612 LRRCC1Q9C099 1032 aa21.67■■□□□ 1.06
COMMD6-202ENST00000377612 AS3MTQ9HBK9 375 aa21.67■■□□□ 1.06
COMMD6-202ENST00000377612 MYH4Q9Y623 1939 aa21.67■■□□□ 1.06
COMMD6-202ENST00000377612 SHMT1P34896 483 aa21.66■■□□□ 1.06
COMMD6-202ENST00000377612 ADD2P35612 726 aa21.66■■□□□ 1.06
COMMD6-202ENST00000377612 BACE1P56817 501 aa21.66■■□□□ 1.06
COMMD6-202ENST00000377612 MTFR1Q15390 333 aa21.66■■□□□ 1.06
COMMD6-202ENST00000377612 SDR42E1Q8WUS8 393 aa21.66■■□□□ 1.06
COMMD6-202ENST00000377612 TRIM34Q9BYJ4 488 aa21.66■■□□□ 1.06
COMMD6-202ENST00000377612 ASCC2Q9H1I8 757 aaPredicted RBP21.66■■□□□ 1.06
COMMD6-202ENST00000377612 SERPINB13Q9UIV8 391 aa21.66■■□□□ 1.06
COMMD6-202ENST00000377612 PEX10O60683 326 aa21.65■■□□□ 1.06
COMMD6-202ENST00000377612 GH2P01242 217 aa21.65■■□□□ 1.06
COMMD6-202ENST00000377612 GABPAQ06546 454 aa21.65■■□□□ 1.06
COMMD6-202ENST00000377612 FAM110CQ1W6H9 321 aa21.65■■□□□ 1.06
COMMD6-202ENST00000377612 PNMA3Q9UL41 463 aa21.65■■□□□ 1.06
COMMD6-202ENST00000377612 CYP2D6P10635 497 aa21.64■■□□□ 1.05
COMMD6-202ENST00000377612 SHISA4Q96DD7 197 aa21.64■■□□□ 1.05
COMMD6-202ENST00000377612 DCTPP1Q9H773 170 aa21.64■■□□□ 1.05
COMMD6-202ENST00000377612 ARMT1Q9H993 441 aa21.64■■□□□ 1.05
COMMD6-202ENST00000377612 PCDHB15Q9Y5E8 787 aa21.64■■□□□ 1.05
COMMD6-202ENST00000377612 SMIM22K7EJ46 135 aa21.63■■□□□ 1.05
COMMD6-202ENST00000377612 PRKAB2O43741 272 aa21.63■■□□□ 1.05
COMMD6-202ENST00000377612 GUCY1A2P33402 732 aa21.63■■□□□ 1.05
COMMD6-202ENST00000377612 RRP1P56182 461 aaKnown RBP21.63■■□□□ 1.05
COMMD6-202ENST00000377612 TSHZ3Q63HK5 1081 aa21.63■■□□□ 1.05
COMMD6-202ENST00000377612 NBPF11Q86T75 865 aa21.63■■□□□ 1.05
COMMD6-202ENST00000377612 RAET1EQ8TD07 263 aa21.63■■□□□ 1.05
COMMD6-202ENST00000377612 CRNKL1Q9BZJ0 848 aaKnown RBP21.63■■□□□ 1.05
COMMD6-202ENST00000377612 DCP1AQ9NPI6 582 aaPredicted RBP21.63■■□□□ 1.05
COMMD6-202ENST00000377612 EMILIN3Q9NT22 766 aa21.63■■□□□ 1.05
COMMD6-202ENST00000377612 GINM1Q9NU53 330 aa21.63■■□□□ 1.05
COMMD6-202ENST00000377612 USP17L10C9JJH3 530 aa21.62■■□□□ 1.05
COMMD6-202ENST00000377612 MBD4O95243 580 aa21.62■■□□□ 1.05
COMMD6-202ENST00000377612 GRK4P32298 578 aa21.62■■□□□ 1.05
COMMD6-202ENST00000377612 POTEEQ6S8J3 1075 aa21.62■■□□□ 1.05
COMMD6-202ENST00000377612 TTC6Q86TZ1 520 aa21.62■■□□□ 1.05
COMMD6-202ENST00000377612 SLC44A5Q8NCS7 719 aa21.62■■□□□ 1.05
COMMD6-202ENST00000377612 ZNFX1Q9P2E3 1918 aaKnown RBP21.61■■□□□ 1.05
COMMD6-202ENST00000377612 TNPO2O14787 897 aaKnown RBP21.61■■□□□ 1.05
COMMD6-202ENST00000377612 HOXD10P28358 340 aa21.61■■□□□ 1.05
COMMD6-202ENST00000377612 FLT3LGP49771 235 aa21.61■■□□□ 1.05
COMMD6-202ENST00000377612 PRPF38BQ5VTL8 546 aaKnown RBP21.61■■□□□ 1.05
COMMD6-202ENST00000377612 TXNRD2Q9NNW7 524 aa21.61■■□□□ 1.05
COMMD6-202ENST00000377612 MCM9Q9NXL9 1143 aa21.61■■□□□ 1.05
COMMD6-202ENST00000377612 CEP290O15078 2479 aa21.61■■□□□ 1.05
COMMD6-202ENST00000377612 ELNP15502 786 aa21.6■■□□□ 1.05
COMMD6-202ENST00000377612 HOXA7P31268 230 aaPredicted RBP21.6■■□□□ 1.05
COMMD6-202ENST00000377612 ACER1Q8TDN7 264 aa21.6■■□□□ 1.05
COMMD6-202ENST00000377612 TMEM106CQ9BVX2 250 aa21.6■■□□□ 1.05
COMMD6-202ENST00000377612 TMOD4Q9NZQ9 345 aa21.6■■□□□ 1.05
COMMD6-202ENST00000377612 MORF4L1Q9UBU8 362 aa21.6■■□□□ 1.05
COMMD6-202ENST00000377612 C19orf81C9J6K1 198 aa21.59■■□□□ 1.05
COMMD6-202ENST00000377612 GCLCP48506 637 aaPredicted RBP21.59■■□□□ 1.05
COMMD6-202ENST00000377612 PABPC4Q13310 644 aaKnown RBP eCLIP21.59■■□□□ 1.055e-7■□□□□ 10
COMMD6-202ENST00000377612 ZYXQ15942 572 aaKnown RBP21.59■■□□□ 1.05
COMMD6-202ENST00000377612 ABCB5Q2M3G0 1257 aa21.59■■□□□ 1.05
COMMD6-202ENST00000377612 CERKLQ49MI3 558 aaPredicted RBP21.59■■□□□ 1.05
COMMD6-202ENST00000377612 C12orf42Q96LP6 360 aa21.59■■□□□ 1.05
COMMD6-202ENST00000377612 P2RX7Q99572 595 aaKnown RBP21.59■■□□□ 1.05
COMMD6-202ENST00000377612 ECHDC1Q9NTX5 307 aa21.59■■□□□ 1.05
COMMD6-202ENST00000377612 ZNF236Q9UL36 1845 aa21.59■■□□□ 1.05
COMMD6-202ENST00000377612 CYP2D7A0A087X1C5 515 aa21.58■■□□□ 1.05
COMMD6-202ENST00000377612 POLR3DP05423 398 aaPredicted RBP21.58■■□□□ 1.05
COMMD6-202ENST00000377612 HERVK_113P62684 666 aa21.58■■□□□ 1.05
COMMD6-202ENST00000377612 IRX3P78415 501 aaPredicted RBP21.58■■□□□ 1.05
COMMD6-202ENST00000377612 IRF5Q13568 498 aa21.58■■□□□ 1.05
COMMD6-202ENST00000377612 RAB3GAP1Q15042 981 aa21.58■■□□□ 1.05
COMMD6-202ENST00000377612 UBE3CQ15386 1083 aa21.58■■□□□ 1.05
COMMD6-202ENST00000377612 SLAIN1Q8ND83 568 aa21.58■■□□□ 1.05
COMMD6-202ENST00000377612 PLXNA1Q9UIW2 1896 aa21.58■■□□□ 1.04
COMMD6-202ENST00000377612 ADCY3O60266 1144 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms