RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 C19orf81C9J6K1 198 aa26.55■■□□□ 1.84
SRM-201ENST00000376957 EFCC1Q9HA90 598 aa26.55■■□□□ 1.84
SRM-201ENST00000376957 AGTPBP1Q9UPW5 1226 aa26.55■■□□□ 1.84
SRM-201ENST00000376957 TRIM17Q9Y577 477 aa26.55■■□□□ 1.84
SRM-201ENST00000376957 GDF11O95390 407 aa26.54■■□□□ 1.84
SRM-201ENST00000376957 PLCD1P51178 756 aa26.54■■□□□ 1.84
SRM-201ENST00000376957 ABCB5Q2M3G0 1257 aa26.54■■□□□ 1.84
SRM-201ENST00000376957 B4GALNT3Q6L9W6 998 aa26.54■■□□□ 1.84
SRM-201ENST00000376957 FBXO46Q6PJ61 603 aaPredicted RBP26.54■■□□□ 1.84
SRM-201ENST00000376957 SMCR8Q8TEV9 937 aaPredicted RBP26.54■■□□□ 1.84
SRM-201ENST00000376957 PUS7LQ9H0K6 701 aaKnown RBP26.54■■□□□ 1.84
SRM-201ENST00000376957 STAP2Q9UGK3 403 aa26.54■■□□□ 1.84
SRM-201ENST00000376957 ZBTB21Q9ULJ3 1066 aa26.54■■□□□ 1.84
SRM-201ENST00000376957 SIPA1L1O43166 1804 aa26.53■■□□□ 1.84
SRM-201ENST00000376957 USP17L10C9JJH3 530 aa26.53■■□□□ 1.84
SRM-201ENST00000376957 MOGSQ13724 837 aa26.53■■□□□ 1.84
SRM-201ENST00000376957 CD99L2Q8TCZ2 262 aa26.53■■□□□ 1.84
SRM-201ENST00000376957 OTUD7AQ8TE49 926 aaPredicted RBP26.53■■□□□ 1.84
SRM-201ENST00000376957 EVI5LQ96CN4 794 aa26.53■■□□□ 1.84
SRM-201ENST00000376957 LNPKQ9C0E8 428 aa26.53■■□□□ 1.84
SRM-201ENST00000376957 GNRH1P01148 92 aa26.52■■□□□ 1.84
SRM-201ENST00000376957 GH2P01242 217 aa26.52■■□□□ 1.84
SRM-201ENST00000376957 OSBPP22059 807 aa26.52■■□□□ 1.84
SRM-201ENST00000376957 PDE1AP54750 535 aa26.52■■□□□ 1.84
SRM-201ENST00000376957 BACE1P56817 501 aa26.52■■□□□ 1.84
SRM-201ENST00000376957 RRP1BQ14684 758 aaKnown RBP26.52■■□□□ 1.84
SRM-201ENST00000376957 SLFNL1Q499Z3 407 aa26.52■■□□□ 1.84
SRM-201ENST00000376957 GPAT2Q6NUI2 795 aa26.52■■□□□ 1.84
SRM-201ENST00000376957 CCDC84Q86UT8 332 aaPredicted RBP26.52■■□□□ 1.84
SRM-201ENST00000376957 CHD1LQ86WJ1 897 aa26.52■■□□□ 1.84
SRM-201ENST00000376957 PHIPQ8WWQ0 1821 aa26.52■■□□□ 1.84
SRM-201ENST00000376957 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.52■■□□□ 1.84
SRM-201ENST00000376957 ARPP21Q9UBL0 812 aaPredicted RBP26.52■■□□□ 1.84
SRM-201ENST00000376957 PRKAB2O43741 272 aa26.51■■□□□ 1.83
SRM-201ENST00000376957 HMGCS2P54868 508 aa26.51■■□□□ 1.83
SRM-201ENST00000376957 RAB3GAP1Q15042 981 aa26.51■■□□□ 1.83
SRM-201ENST00000376957 GIMAP6Q6P9H5 292 aa26.51■■□□□ 1.83
SRM-201ENST00000376957 TICAM2Q86XR7 235 aa26.51■■□□□ 1.83
SRM-201ENST00000376957 STRBPQ96SI9 672 aaKnown RBP26.51■■□□□ 1.83
SRM-201ENST00000376957 FEZ1Q99689 392 aa26.51■■□□□ 1.83
SRM-201ENST00000376957 APPP05067 770 aa26.5■■□□□ 1.83
SRM-201ENST00000376957 MTMR2Q13614 643 aa26.5■■□□□ 1.83
SRM-201ENST00000376957 SH3D19Q5HYK7 790 aa26.5■■□□□ 1.83
SRM-201ENST00000376957 OTOP1Q7RTM1 612 aa26.5■■□□□ 1.83
SRM-201ENST00000376957 NACAP1Q9BZK3 213 aa26.5■■□□□ 1.83
SRM-201ENST00000376957 SALL3Q9BXA9 1300 aa26.49■■□□□ 1.83
SRM-201ENST00000376957 USP17L12C9JPN9 530 aa26.49■■□□□ 1.83
SRM-201ENST00000376957 USP17L21D6R901 530 aa26.49■■□□□ 1.83
SRM-201ENST00000376957 MPHOSPH10O00566 681 aaKnown RBP26.49■■□□□ 1.83
SRM-201ENST00000376957 IGHDP01880 384 aa26.49■■□□□ 1.83
SRM-201ENST00000376957 HOXD10P28358 340 aa26.49■■□□□ 1.83
SRM-201ENST00000376957 NUCB1Q02818 461 aa26.49■■□□□ 1.83
SRM-201ENST00000376957 C17orf99Q6UX52 265 aa26.49■■□□□ 1.83
SRM-201ENST00000376957 OSBP2Q969R2 916 aa26.49■■□□□ 1.83
SRM-201ENST00000376957 CPA4Q9UI42 421 aa26.49■■□□□ 1.83
SRM-201ENST00000376957 PTPRFP10586 1907 aa26.49■■□□□ 1.83
SRM-201ENST00000376957 CYP2C8P10632 490 aa26.48■■□□□ 1.83
SRM-201ENST00000376957 USP14P54578 494 aa26.48■■□□□ 1.83
SRM-201ENST00000376957 LACTBP83111 547 aaPredicted RBP26.48■■□□□ 1.83
SRM-201ENST00000376957 GABPAQ06546 454 aa26.48■■□□□ 1.83
SRM-201ENST00000376957 C12orf60Q5U649 245 aa26.48■■□□□ 1.83
SRM-201ENST00000376957 CCDC17Q96LX7 622 aa26.48■■□□□ 1.83
SRM-201ENST00000376957 ZNF287Q9HBT7 754 aa26.48■■□□□ 1.83
SRM-201ENST00000376957 DDX60LQ5H9U9 1706 aaKnown RBP26.48■■□□□ 1.83
SRM-201ENST00000376957 GPAA1O43292 621 aa26.47■■□□□ 1.83
SRM-201ENST00000376957 SHMT1P34896 483 aa26.47■■□□□ 1.83
SRM-201ENST00000376957 USP17L2Q6R6M4 530 aa26.47■■□□□ 1.83
SRM-201ENST00000376957 HPS5Q9UPZ3 1129 aa26.47■■□□□ 1.83
SRM-201ENST00000376957 TRIM6-TRIM34B2RNG4 842 aa26.46■■□□□ 1.83
SRM-201ENST00000376957 CHGBP05060 677 aa26.46■■□□□ 1.83
SRM-201ENST00000376957 TDO2P48775 406 aa26.46■■□□□ 1.83
SRM-201ENST00000376957 PRMT2P55345 433 aa26.46■■□□□ 1.83
SRM-201ENST00000376957 IRX6P78412 446 aaPredicted RBP26.46■■□□□ 1.83
SRM-201ENST00000376957 IRX3P78415 501 aaPredicted RBP26.46■■□□□ 1.83
SRM-201ENST00000376957 PTPN22Q9Y2R2 807 aa26.46■■□□□ 1.83
SRM-201ENST00000376957 PATL2C9JE40 543 aaKnown RBP26.45■■□□□ 1.82
SRM-201ENST00000376957 GCLCP48506 637 aaPredicted RBP26.45■■□□□ 1.82
SRM-201ENST00000376957 CTR9Q6PD62 1173 aa26.45■■□□□ 1.82
SRM-201ENST00000376957 TMEM179Q6ZVK1 233 aa26.45■■□□□ 1.82
SRM-201ENST00000376957 BAZ2AQ9UIF9 1905 aaKnown RBP26.44■■□□□ 1.82
SRM-201ENST00000376957 FMNL1O95466 1100 aaPredicted RBP26.44■■□□□ 1.82
SRM-201ENST00000376957 CYP2D6P10635 497 aa26.44■■□□□ 1.82
SRM-201ENST00000376957 JAG1P78504 1218 aa26.44■■□□□ 1.82
SRM-201ENST00000376957 SBK1Q52WX2 424 aa26.44■■□□□ 1.82
SRM-201ENST00000376957 TREML2Q5T2D2 321 aa26.44■■□□□ 1.82
SRM-201ENST00000376957 GSG1L2A8MUP6 293 aa26.43■■□□□ 1.82
SRM-201ENST00000376957 FCGRTP55899 365 aa26.43■■□□□ 1.82
SRM-201ENST00000376957 ZMYM1Q5SVZ6 1142 aa26.43■■□□□ 1.82
SRM-201ENST00000376957 C16orf86Q6ZW13 317 aa26.43■■□□□ 1.82
SRM-201ENST00000376957 NBPF11Q86T75 865 aa26.43■■□□□ 1.82
SRM-201ENST00000376957 SH2D4AQ9H788 454 aa26.43■■□□□ 1.82
SRM-201ENST00000376957 ADGRA2Q96PE1 1338 aa26.42■■□□□ 1.82
SRM-201ENST00000376957 MYH8P13535 1937 aa26.42■■□□□ 1.82
SRM-201ENST00000376957 MINDY4BA8MYZ0 360 aa26.42■■□□□ 1.82
SRM-201ENST00000376957 SLC3A2P08195 630 aaKnown RBP26.42■■□□□ 1.82
SRM-201ENST00000376957 HOXA7P31268 230 aaPredicted RBP26.42■■□□□ 1.82
SRM-201ENST00000376957 PSMC4P43686 418 aa26.42■■□□□ 1.82
SRM-201ENST00000376957 CDK8P49336 464 aa26.42■■□□□ 1.82
SRM-201ENST00000376957 GTF3C2Q8WUA4 911 aaPredicted RBP26.42■■□□□ 1.82
SRM-201ENST00000376957 RILPL2Q969X0 211 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms