RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 FOXP1Q9H334 677 aaPredicted RBP23.33■■□□□ 1.33
VSX1-202ENST00000376709 ARPP21Q9UBL0 812 aaPredicted RBP23.33■■□□□ 1.33
VSX1-202ENST00000376709 XDHP47989 1333 aa23.33■■□□□ 1.33
VSX1-202ENST00000376709 SYKP43405 635 aa23.33■■□□□ 1.32
VSX1-202ENST00000376709 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.33■■□□□ 1.32
VSX1-202ENST00000376709 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.33■■□□□ 1.32
VSX1-202ENST00000376709 WDR66Q8TBY9 1149 aa23.32■■□□□ 1.32
VSX1-202ENST00000376709 POLRMTO00411 1230 aaKnown RBP23.31■■□□□ 1.32
VSX1-202ENST00000376709 LDHBP07195 334 aaKnown RBP23.31■■□□□ 1.32
VSX1-202ENST00000376709 RBM6P78332 1123 aaKnown RBP23.31■■□□□ 1.32
VSX1-202ENST00000376709 EVX2Q03828 476 aa23.31■■□□□ 1.32
VSX1-202ENST00000376709 SHC4Q6S5L8 630 aa23.31■■□□□ 1.32
VSX1-202ENST00000376709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.31■■□□□ 1.32
VSX1-202ENST00000376709 DLEC1Q9Y238 1755 aa23.31■■□□□ 1.32
VSX1-202ENST00000376709 ORC4O43929 436 aa23.31■■□□□ 1.32
VSX1-202ENST00000376709 CALM1P0DP23 149 aa23.31■■□□□ 1.32
VSX1-202ENST00000376709 CALM2P0DP24 149 aa23.31■■□□□ 1.32
VSX1-202ENST00000376709 CALM3P0DP25 149 aa23.31■■□□□ 1.32
VSX1-202ENST00000376709 XBP1P17861 261 aa23.31■■□□□ 1.32
VSX1-202ENST00000376709 GPSM2P81274 684 aa23.31■■□□□ 1.32
VSX1-202ENST00000376709 RILPL1Q5EBL4 403 aa23.31■■□□□ 1.32
VSX1-202ENST00000376709 ZNF804AQ7Z570 1209 aa23.31■■□□□ 1.32
VSX1-202ENST00000376709 DHX40Q8IX18 779 aaKnown RBP23.31■■□□□ 1.32
VSX1-202ENST00000376709 RBM28Q9NW13 759 aaKnown RBP23.31■■□□□ 1.32
VSX1-202ENST00000376709 CUTAO60888 179 aa23.3■■□□□ 1.32
VSX1-202ENST00000376709 PDE4BQ07343 736 aa23.3■■□□□ 1.32
VSX1-202ENST00000376709 ZNF827Q17R98 1081 aa23.3■■□□□ 1.32
VSX1-202ENST00000376709 CLIC6Q96NY7 704 aa23.3■■□□□ 1.32
VSX1-202ENST00000376709 KCNF1Q9H3M0 494 aa23.3■■□□□ 1.32
VSX1-202ENST00000376709 ZBTB22O15209 634 aa23.3■■□□□ 1.32
VSX1-202ENST00000376709 NR5A1Q13285 461 aa23.3■■□□□ 1.32
VSX1-202ENST00000376709 C17orf53Q8N3J3 647 aaPredicted RBP23.3■■□□□ 1.32
VSX1-202ENST00000376709 RBM17Q96I25 401 aaKnown RBP23.3■■□□□ 1.32
VSX1-202ENST00000376709 TIGD1Q96MW7 591 aa23.3■■□□□ 1.32
VSX1-202ENST00000376709 MCM9Q9NXL9 1143 aa23.3■■□□□ 1.32
VSX1-202ENST00000376709 KIAA1551Q9HCM1 1747 aa23.29■■□□□ 1.32
VSX1-202ENST00000376709 TPM2P07951 284 aa23.29■■□□□ 1.32
VSX1-202ENST00000376709 CYP2D6P10635 497 aa23.29■■□□□ 1.32
VSX1-202ENST00000376709 PTGS1P23219 599 aa23.29■■□□□ 1.32
VSX1-202ENST00000376709 TROAPQ12815 778 aa23.29■■□□□ 1.32
VSX1-202ENST00000376709 NOLC1Q14978 699 aaKnown RBP eCLIP23.29■■□□□ 1.32
VSX1-202ENST00000376709 SBK1Q52WX2 424 aa23.29■■□□□ 1.32
VSX1-202ENST00000376709 RESP18Q5W5W9 173 aa23.29■■□□□ 1.32
VSX1-202ENST00000376709 SARM1Q6SZW1 724 aa23.29■■□□□ 1.32
VSX1-202ENST00000376709 AOPEPQ8N6M6 819 aa23.29■■□□□ 1.32
VSX1-202ENST00000376709 CLIP2Q9UDT6 1046 aa23.29■■□□□ 1.32
VSX1-202ENST00000376709 HPSEQ9Y251 543 aa23.29■■□□□ 1.32
VSX1-202ENST00000376709 DDAH1O94760 285 aa23.28■■□□□ 1.32
VSX1-202ENST00000376709 TOB1P50616 345 aaPredicted RBP23.28■■□□□ 1.32
VSX1-202ENST00000376709 DPCR1Q3MIW9 517 aa23.28■■□□□ 1.32
VSX1-202ENST00000376709 FAM47AQ5JRC9 791 aa23.28■■□□□ 1.32
VSX1-202ENST00000376709 ZNF772Q68DY9 489 aaPredicted RBP23.28■■□□□ 1.32
VSX1-202ENST00000376709 KRI1Q8N9T8 703 aaKnown RBP23.28■■□□□ 1.32
VSX1-202ENST00000376709 NMT2O60551 498 aa23.28■■□□□ 1.32
VSX1-202ENST00000376709 PLEKHA8P1O95397 391 aa23.28■■□□□ 1.32
VSX1-202ENST00000376709 SLC4A8Q2Y0W8 1093 aa23.28■■□□□ 1.32
VSX1-202ENST00000376709 DNTTIP2Q5QJE6 756 aaKnown RBP23.28■■□□□ 1.32
VSX1-202ENST00000376709 CCDC186Q7Z3E2 898 aa23.28■■□□□ 1.32
VSX1-202ENST00000376709 TSPY2A6NKD2 308 aa23.27■■□□□ 1.32
VSX1-202ENST00000376709 BIN1O00499 593 aa23.27■■□□□ 1.32
VSX1-202ENST00000376709 USP5P45974 858 aa23.27■■□□□ 1.32
VSX1-202ENST00000376709 UFL1O94874 794 aa23.27■■□□□ 1.32
VSX1-202ENST00000376709 APBA3O96018 575 aa23.27■■□□□ 1.32
VSX1-202ENST00000376709 GSTO1P78417 241 aa23.27■■□□□ 1.32
VSX1-202ENST00000376709 CTCFLQ8NI51 663 aaPredicted RBP23.27■■□□□ 1.32
VSX1-202ENST00000376709 OXER1Q8TDS5 423 aa23.27■■□□□ 1.32
VSX1-202ENST00000376709 VPS54Q9P1Q0 977 aa23.27■■□□□ 1.32
VSX1-202ENST00000376709 V9GY48 417 aaPredicted RBP23.27■■□□□ 1.32
VSX1-202ENST00000376709 hCG_1642624A0A1W2PR95 340 aa23.26■■□□□ 1.31
VSX1-202ENST00000376709 PRPF3O43395 683 aaKnown RBP23.26■■□□□ 1.31
VSX1-202ENST00000376709 CDC25BP30305 580 aa23.26■■□□□ 1.31
VSX1-202ENST00000376709 FUT2Q10981 343 aa23.26■■□□□ 1.31
VSX1-202ENST00000376709 FAM237AA0A1B0GTK4 181 aa23.25■■□□□ 1.31
VSX1-202ENST00000376709 IGSF3O75054 1194 aa23.25■■□□□ 1.31
VSX1-202ENST00000376709 USP17L8P0C7I0 530 aa23.25■■□□□ 1.31
VSX1-202ENST00000376709 PKN1Q16512 942 aa23.25■■□□□ 1.31
VSX1-202ENST00000376709 NOL10Q9BSC4 688 aaKnown RBP23.25■■□□□ 1.31
VSX1-202ENST00000376709 CABP5Q9NP86 173 aa23.25■■□□□ 1.31
VSX1-202ENST00000376709 NRBP1Q9UHY1 535 aa23.25■■□□□ 1.31
VSX1-202ENST00000376709 KCNH3Q9ULD8 1083 aa23.25■■□□□ 1.31
VSX1-202ENST00000376709 BAG3O95817 575 aa23.25■■□□□ 1.31
VSX1-202ENST00000376709 NLRP12P59046 1061 aa23.25■■□□□ 1.31
VSX1-202ENST00000376709 DIXDC1Q155Q3 683 aa23.25■■□□□ 1.31
VSX1-202ENST00000376709 MRFAP1L1Q96HT8 127 aa23.25■■□□□ 1.31
VSX1-202ENST00000376709 CEP131Q9UPN4 1083 aa23.25■■□□□ 1.31
VSX1-202ENST00000376709 ATP2B1P20020 1258 aa23.24■■□□□ 1.31
VSX1-202ENST00000376709 TERF1P54274 439 aa23.24■■□□□ 1.31
VSX1-202ENST00000376709 TMTC3Q6ZXV5 915 aa23.24■■□□□ 1.31
VSX1-202ENST00000376709 KIAA1524Q8TCG1 905 aa23.24■■□□□ 1.31
VSX1-202ENST00000376709 SH3RF3Q8TEJ3 882 aaPredicted RBP23.24■■□□□ 1.31
VSX1-202ENST00000376709 BPIFA3Q9BQP9 254 aa23.24■■□□□ 1.31
VSX1-202ENST00000376709 PYCARDQ9ULZ3 195 aa23.24■■□□□ 1.31
VSX1-202ENST00000376709 PCDHB6Q9Y5E3 794 aa23.24■■□□□ 1.31
VSX1-202ENST00000376709 HOXA10P31260 410 aaPredicted RBP23.24■■□□□ 1.31
VSX1-202ENST00000376709 KRT2P35908 639 aa23.24■■□□□ 1.31
VSX1-202ENST00000376709 C15orf52Q6ZUT6 534 aaKnown RBP23.24■■□□□ 1.31
VSX1-202ENST00000376709 AMOTL1Q8IY63 956 aa23.24■■□□□ 1.31
VSX1-202ENST00000376709 AKT1S1Q96B36 256 aa23.24■■□□□ 1.31
VSX1-202ENST00000376709 GGA1Q9UJY5 639 aa23.24■■□□□ 1.31
VSX1-202ENST00000376709 PLSCR1O15162 318 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms