RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 SLURP2P0DP57 97 aa17.94■□□□□ 0.46
HDAC6-204ENST00000376643 RPAP2Q8IXW5 612 aaPredicted RBP17.94■□□□□ 0.46
HDAC6-204ENST00000376643 SOCS4Q8WXH5 440 aa17.94■□□□□ 0.46
HDAC6-204ENST00000376643 SHISA4Q96DD7 197 aa17.94■□□□□ 0.46
HDAC6-204ENST00000376643 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.94■□□□□ 0.46
HDAC6-204ENST00000376643 MORF4L1Q9UBU8 362 aa17.94■□□□□ 0.46
HDAC6-204ENST00000376643 TAOK2Q9UL54 1235 aa17.94■□□□□ 0.46
HDAC6-204ENST00000376643 PALD1Q9ULE6 856 aa17.94■□□□□ 0.46
HDAC6-204ENST00000376643 ZBTB21Q9ULJ3 1066 aa17.94■□□□□ 0.46
HDAC6-204ENST00000376643 DDX19BQ9UMR2 479 aa17.94■□□□□ 0.46
HDAC6-204ENST00000376643 HMGCRP04035 888 aa17.93■□□□□ 0.46
HDAC6-204ENST00000376643 ADGRA1Q86SQ6 560 aa17.93■□□□□ 0.46
HDAC6-204ENST00000376643 CCAR1Q8IX12 1150 aaKnown RBP17.93■□□□□ 0.46
HDAC6-204ENST00000376643 TRMT44Q8IYL2 757 aaKnown RBP17.93■□□□□ 0.46
HDAC6-204ENST00000376643 MAGEB6Q8N7X4 407 aa17.93■□□□□ 0.46
HDAC6-204ENST00000376643 KIF1BPQ96EK5 621 aa17.93■□□□□ 0.46
HDAC6-204ENST00000376643 UNC93B1Q9H1C4 597 aa17.93■□□□□ 0.46
HDAC6-204ENST00000376643 SERPINB13Q9UIV8 391 aa17.93■□□□□ 0.46
HDAC6-204ENST00000376643 ATAD5Q96QE3 1844 aa17.93■□□□□ 0.46
HDAC6-204ENST00000376643 USP14P54578 494 aa17.92■□□□□ 0.46
HDAC6-204ENST00000376643 PDE3AQ14432 1141 aa17.92■□□□□ 0.46
HDAC6-204ENST00000376643 USP17L2Q6R6M4 530 aa17.92■□□□□ 0.46
HDAC6-204ENST00000376643 GPRC5AQ8NFJ5 357 aa17.92■□□□□ 0.46
HDAC6-204ENST00000376643 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.92■□□□□ 0.46
HDAC6-204ENST00000376643 TLR7Q9NYK1 1049 aaKnown RBP17.92■□□□□ 0.46
HDAC6-204ENST00000376643 EXOC6BQ9Y2D4 811 aa17.92■□□□□ 0.46
HDAC6-204ENST00000376643 MKI67P46013 3256 aaKnown RBP17.92■□□□□ 0.46
HDAC6-204ENST00000376643 TFRCP02786 760 aaKnown RBP17.91■□□□□ 0.46
HDAC6-204ENST00000376643 ELNP15502 786 aa17.91■□□□□ 0.46
HDAC6-204ENST00000376643 MAPK4P31152 587 aa17.91■□□□□ 0.46
HDAC6-204ENST00000376643 RHPN1Q8TCX5 695 aa17.91■□□□□ 0.46
HDAC6-204ENST00000376643 FEZ1Q99689 392 aa17.91■□□□□ 0.46
HDAC6-204ENST00000376643 DNAJC18Q9H819 358 aa17.91■□□□□ 0.46
HDAC6-204ENST00000376643 CABP5Q9NP86 173 aa17.91■□□□□ 0.46
HDAC6-204ENST00000376643 PAK6Q9NQU5 681 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-204ENST00000376643 SAP30BPQ9UHR5 308 aaKnown RBP17.91■□□□□ 0.46
HDAC6-204ENST00000376643 BRCA2P51587 3418 aa17.91■□□□□ 0.46
HDAC6-204ENST00000376643 FOCADQ5VW36 1801 aa17.91■□□□□ 0.46
HDAC6-204ENST00000376643 H0YGN5 161 aa17.9■□□□□ 0.46
HDAC6-204ENST00000376643 RAB11FIP3O75154 756 aa17.9■□□□□ 0.46
HDAC6-204ENST00000376643 GDF11O95390 407 aa17.9■□□□□ 0.46
HDAC6-204ENST00000376643 IFIT2P09913 472 aaKnown RBP17.9■□□□□ 0.46
HDAC6-204ENST00000376643 HERVK_113P62684 666 aa17.9■□□□□ 0.46
HDAC6-204ENST00000376643 RRP1BQ14684 758 aaKnown RBP17.9■□□□□ 0.46
HDAC6-204ENST00000376643 TATDN1Q6P1N9 297 aa17.9■□□□□ 0.46
HDAC6-204ENST00000376643 UBE2Q1Q7Z7E8 422 aa17.9■□□□□ 0.46
HDAC6-204ENST00000376643 ANKLE1Q8NAG6 615 aa17.9■□□□□ 0.46
HDAC6-204ENST00000376643 MIGA1Q8NAN2 632 aa17.9■□□□□ 0.46
HDAC6-204ENST00000376643 NUDT12Q9BQG2 462 aa17.9■□□□□ 0.46
HDAC6-204ENST00000376643 CRNKL1Q9BZJ0 848 aaKnown RBP17.9■□□□□ 0.46
HDAC6-204ENST00000376643 MAGEB6P1A0A0J9YX57 407 aa17.89■□□□□ 0.45
HDAC6-204ENST00000376643 GLRX3O76003 335 aaKnown RBP17.89■□□□□ 0.45
HDAC6-204ENST00000376643 XRCC5P13010 732 aaKnown RBP17.89■□□□□ 0.45
HDAC6-204ENST00000376643 DYNLL1P63167 89 aaKnown RBP17.89■□□□□ 0.45
HDAC6-204ENST00000376643 CCNA1P78396 465 aa17.89■□□□□ 0.45
HDAC6-204ENST00000376643 PANK1Q8TE04 598 aa17.89■□□□□ 0.45
HDAC6-204ENST00000376643 C12orf42Q96LP6 360 aa17.89■□□□□ 0.45
HDAC6-204ENST00000376643 DEFB118Q96PH6 123 aa17.89■□□□□ 0.45
HDAC6-204ENST00000376643 CWC22Q9HCG8 908 aaKnown RBP17.89■□□□□ 0.45
HDAC6-204ENST00000376643 HMX1Q9NP08 348 aaPredicted RBP17.89■□□□□ 0.45
HDAC6-204ENST00000376643 RPTORQ8N122 1335 aa17.89■□□□□ 0.45
HDAC6-204ENST00000376643 GH2P01242 217 aa17.88■□□□□ 0.45
HDAC6-204ENST00000376643 POLR3DP05423 398 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-204ENST00000376643 CERKLQ49MI3 558 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-204ENST00000376643 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.88■□□□□ 0.45
HDAC6-204ENST00000376643 COLQQ9Y215 455 aaPredicted RBP17.88■□□□□ 0.45
HDAC6-204ENST00000376643 SIPA1L1O43166 1804 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 USP17L15C9J2P7 530 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 USP17L13C9JLJ4 530 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 USP17L11C9JVI0 530 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 USP17L18D6R9N7 530 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 USP17L22D6RA61 530 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 USP17L17D6RBQ6 530 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 USP17L19D6RCP7 530 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 USP17L20D6RJB6 530 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 USP17L24Q0WX57 530 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 ABCB5Q2M3G0 1257 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 SLC9C2Q5TAH2 1124 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 NECAB2Q7Z6G3 386 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 P2RX7Q99572 595 aaKnown RBP17.87■□□□□ 0.45
HDAC6-204ENST00000376643 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.87■□□□□ 0.452e-8■■■■□ 24.1
HDAC6-204ENST00000376643 KIAA1683Q9H0B3 1180 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 CRISPLD2Q9H0B8 497 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 IL1RAPL2Q9NP60 686 aa17.87■□□□□ 0.45
HDAC6-204ENST00000376643 EVI5O60447 810 aa17.86■□□□□ 0.45
HDAC6-204ENST00000376643 ERVK-9P63128 1117 aa17.86■□□□□ 0.45
HDAC6-204ENST00000376643 ERVK-24P63145 666 aa17.86■□□□□ 0.45
HDAC6-204ENST00000376643 AMOTL1Q8IY63 956 aa17.86■□□□□ 0.45
HDAC6-204ENST00000376643 DDRGK1Q96HY6 314 aa17.86■□□□□ 0.45
HDAC6-204ENST00000376643 ANTXR1Q9H6X2 564 aa17.86■□□□□ 0.45
HDAC6-204ENST00000376643 GJD2Q9UKL4 321 aa17.86■□□□□ 0.45
HDAC6-204ENST00000376643 RABGAP1Q9Y3P9 1069 aa17.86■□□□□ 0.45
HDAC6-204ENST00000376643 PDE6AP16499 860 aa17.85■□□□□ 0.45
HDAC6-204ENST00000376643 ZKSCAN1P17029 563 aaPredicted RBP17.85■□□□□ 0.45
HDAC6-204ENST00000376643 RGS2P41220 211 aa17.85■□□□□ 0.45
HDAC6-204ENST00000376643 RAB3GAP1Q15042 981 aa17.85■□□□□ 0.45
HDAC6-204ENST00000376643 CDK5RAP2Q96SN8 1893 aa17.85■□□□□ 0.45
HDAC6-204ENST00000376643 RIOK1Q9BRS2 568 aaKnown RBP17.85■□□□□ 0.45
HDAC6-204ENST00000376643 EMILIN3Q9NT22 766 aa17.85■□□□□ 0.45
HDAC6-204ENST00000376643 ZBTB40Q9NUA8 1239 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms