RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 POLD4Q9HCU8 107 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 TCP11L1Q9NUJ3 509 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 SCAF8Q9UPN6 1271 aaKnown RBP12.68□□□□□ -0.38
HDAC6-203ENST00000376619 DEXIO95424 95 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 GNAT2P19087 354 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 CHMP4BP1P59074 171 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 ASIC1P78348 528 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 STIM1Q13586 685 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 ADALQ6DHV7 355 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 DYMQ7RTS9 669 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 ZNF804AQ7Z570 1209 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 NOSTRINQ8IVI9 506 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 SLC4A9Q96Q91 983 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 NYXQ9GZU5 481 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 SEPT11Q9NVA2 429 aaKnown RBP12.68□□□□□ -0.38
HDAC6-203ENST00000376619 DACH1Q9UI36 760 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 KIF23Q02241 960 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-203ENST00000376619 INF2Q27J81 1249 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 TCERG1LQ5VWI1 586 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 LINC00301Q8NCQ3 95 aa12.68□□□□□ -0.38
HDAC6-203ENST00000376619 UBN2Q6ZU65 1347 aa12.67□□□□□ -0.38
HDAC6-203ENST00000376619 UBE3CQ15386 1083 aa12.67□□□□□ -0.38
HDAC6-203ENST00000376619 FCHSD1Q86WN1 690 aa12.67□□□□□ -0.38
HDAC6-203ENST00000376619 RGPD8O14715 1765 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-203ENST00000376619 ZNF804BA4D1E1 1349 aa12.67□□□□□ -0.38
HDAC6-203ENST00000376619 CTDNEP1O95476 244 aa12.67□□□□□ -0.38
HDAC6-203ENST00000376619 MECOMQ03112 1051 aa12.67□□□□□ -0.38
HDAC6-203ENST00000376619 CLEC10AQ8IUN9 316 aa12.67□□□□□ -0.38
HDAC6-203ENST00000376619 CCDC12Q8WUD4 166 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-203ENST00000376619 BIN2Q9UBW5 565 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-203ENST00000376619 NWD1Q149M9 1564 aa12.67□□□□□ -0.38
HDAC6-203ENST00000376619 ILDR2Q71H61 639 aa12.67□□□□□ -0.38
HDAC6-203ENST00000376619 MINPP1Q9UNW1 487 aa12.67□□□□□ -0.38
HDAC6-203ENST00000376619 MYL5Q02045 173 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 KIAA1328Q86T90 577 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 ZSCAN10Q96SZ4 725 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-203ENST00000376619 DBNDD1Q9H9R9 158 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 ADGRB2O60241 1585 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 PLS1Q14651 629 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 USH1GQ495M9 461 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 PNMA1Q8ND90 353 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 PUF60Q9UHX1 559 aaKnown RBP12.66□□□□□ -0.38
HDAC6-203ENST00000376619 GGA1Q9UJY5 639 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
HDAC6-203ENST00000376619 IFT172Q9UG01 1749 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 SP4Q02446 784 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 TTC38Q5R3I4 469 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 USP17L2Q6R6M4 530 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 USP49Q70CQ1 688 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.66□□□□□ -0.381e-7■■■■■ 50.5
HDAC6-203ENST00000376619 CTNND2Q9UQB3 1225 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 CCNT1O60563 726 aaKnown RBP12.66□□□□□ -0.38
HDAC6-203ENST00000376619 SLC16A2P36021 539 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 PTGDRQ13258 359 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 C3orf67Q6ZVT6 689 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 PLEKHA4Q9H4M7 779 aa12.66□□□□□ -0.38
HDAC6-203ENST00000376619 ELP1O95163 1332 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 GSG1L2A8MUP6 293 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 MYO1BO43795 1136 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
HDAC6-203ENST00000376619 U2AF2P26368 475 aaKnown RBP eCLIP12.65□□□□□ -0.381e-7■■□□□ 14.2
HDAC6-203ENST00000376619 TDRD12Q587J7 1177 aaKnown RBP12.65□□□□□ -0.38
HDAC6-203ENST00000376619 CSRNP2Q9H175 543 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 GPR108Q9NPR9 543 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 BMP2KQ9NSY1 1161 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-203ENST00000376619 ZNHIT6Q9NWK9 470 aaKnown RBP12.65□□□□□ -0.38
HDAC6-203ENST00000376619 TTF2Q9UNY4 1162 aaKnown RBP12.65□□□□□ -0.38
HDAC6-203ENST00000376619 SH2B2O14492 632 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-203ENST00000376619 FDPSP14324 419 aaKnown RBP12.65□□□□□ -0.38
HDAC6-203ENST00000376619 TNNT3P45378 269 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-203ENST00000376619 ANTXR2P58335 489 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 RILPL1Q5EBL4 403 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 SPICE1Q8N0Z3 855 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 ARHGEF1Q92888 912 aaKnown RBP12.65□□□□□ -0.38
HDAC6-203ENST00000376619 PSMB7Q99436 277 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 ZNF287Q9HBT7 754 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 RCOR1Q9UKL0 485 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 ZBTB21Q9ULJ3 1066 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 THRAP3Q9Y2W1 955 aaKnown RBP12.65□□□□□ -0.38
HDAC6-203ENST00000376619 TRIM21P19474 475 aaKnown RBP12.65□□□□□ -0.38
HDAC6-203ENST00000376619 SNAP25P60880 206 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 NFIXQ14938 502 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 FEZ1Q99689 392 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 TAB2Q9NYJ8 693 aa12.65□□□□□ -0.38
HDAC6-203ENST00000376619 ZMYM6O95789 1325 aa12.65□□□□□ -0.39
HDAC6-203ENST00000376619 CALM1P0DP23 149 aa12.64□□□□□ -0.39
HDAC6-203ENST00000376619 CALM2P0DP24 149 aa12.64□□□□□ -0.39
HDAC6-203ENST00000376619 CALM3P0DP25 149 aa12.64□□□□□ -0.39
HDAC6-203ENST00000376619 IBSPP21815 317 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-203ENST00000376619 PRKG1Q13976 671 aa12.64□□□□□ -0.39
HDAC6-203ENST00000376619 DTHD1Q6ZMT9 781 aa12.64□□□□□ -0.39
HDAC6-203ENST00000376619 TXNRD3Q86VQ6 643 aa12.64□□□□□ -0.39
HDAC6-203ENST00000376619 ARID4AP29374 1257 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-203ENST00000376619 POSTNQ15063 836 aa12.64□□□□□ -0.39
HDAC6-203ENST00000376619 MAEAQ7L5Y9 396 aa12.64□□□□□ -0.39
HDAC6-203ENST00000376619 EVX2Q03828 476 aa12.64□□□□□ -0.39
HDAC6-203ENST00000376619 PTPROQ16827 1216 aa12.64□□□□□ -0.39
HDAC6-203ENST00000376619 CCDC144BQ3MJ40 725 aa12.64□□□□□ -0.39
HDAC6-203ENST00000376619 MXD3Q9BW11 206 aa12.64□□□□□ -0.39
HDAC6-203ENST00000376619 ANKRD2Q9GZV1 360 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms