RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 KIAA1468Q9P260 1216 aa15.28■□□□□ 0.04
C9orf47-203ENST00000375851 SERTAD1Q9UHV2 236 aa15.28■□□□□ 0.04
C9orf47-203ENST00000375851 FRMD4BQ9Y2L6 1034 aa15.28■□□□□ 0.04
C9orf47-203ENST00000375851 CDC42BPAQ5VT25 1732 aa15.28■□□□□ 0.04
C9orf47-203ENST00000375851 BTBD18B2RXH4 712 aa15.27■□□□□ 0.04
C9orf47-203ENST00000375851 PFKFB1P16118 471 aa15.27■□□□□ 0.04
C9orf47-203ENST00000375851 PNMA1Q8ND90 353 aa15.27■□□□□ 0.04
C9orf47-203ENST00000375851 ZMYM6O95789 1325 aa15.27■□□□□ 0.04
C9orf47-203ENST00000375851 DYMQ7RTS9 669 aa15.27■□□□□ 0.04
C9orf47-203ENST00000375851 CPXCR1Q8N123 301 aa15.27■□□□□ 0.04
C9orf47-203ENST00000375851 SMCO2A6NFE2 343 aa15.27■□□□□ 0.03
C9orf47-203ENST00000375851 ATP2B4P23634 1241 aa15.27■□□□□ 0.03
C9orf47-203ENST00000375851 TUBB4BP68371 445 aa15.27■□□□□ 0.03
C9orf47-203ENST00000375851 TRIM14Q14142 442 aa15.27■□□□□ 0.03
C9orf47-203ENST00000375851 CALCRLQ16602 461 aa15.27■□□□□ 0.03
C9orf47-203ENST00000375851 FBXO18Q8NFZ0 1043 aa15.27■□□□□ 0.03
C9orf47-203ENST00000375851 IQGAP3Q86VI3 1631 aa15.27■□□□□ 0.03
C9orf47-203ENST00000375851 EPB41P11171 864 aaKnown RBP15.27■□□□□ 0.03
C9orf47-203ENST00000375851 SCRN1Q12765 414 aa15.27■□□□□ 0.03
C9orf47-203ENST00000375851 RNF187Q5TA31 235 aaPredicted RBP15.27■□□□□ 0.03
C9orf47-203ENST00000375851 NCAPH2Q6IBW4 605 aa15.27■□□□□ 0.03
C9orf47-203ENST00000375851 TRMT44Q8IYL2 757 aaKnown RBP15.27■□□□□ 0.03
C9orf47-203ENST00000375851 SUPT20HQ8NEM7 779 aa15.27■□□□□ 0.03
C9orf47-203ENST00000375851 UIMC1Q96RL1 719 aa15.27■□□□□ 0.03
C9orf47-203ENST00000375851 PPP1R9BQ96SB3 815 aa15.27■□□□□ 0.03
C9orf47-203ENST00000375851 USH1GQ495M9 461 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 C17orf53Q8N3J3 647 aaPredicted RBP15.26■□□□□ 0.03
C9orf47-203ENST00000375851 BBXQ8WY36 941 aaPredicted RBP15.26■□□□□ 0.03
C9orf47-203ENST00000375851 RRAGDQ9NQL2 400 aaPredicted RBP15.26■□□□□ 0.03
C9orf47-203ENST00000375851 PICK1Q9NRD5 415 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 CALCOCO1Q9P1Z2 691 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 HEG1Q9ULI3 1381 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 SASH1O94885 1247 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 RHOXF2BP0C7M4 288 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 KRT9P35527 623 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 CABP7Q86V35 215 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 NLRP10Q86W26 655 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 RHOXF2Q9BQY4 288 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 FAM107BQ9H098 131 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 SEC31BQ9NQW1 1179 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 CFBP00751 764 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 PNOCQ13519 176 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 DLGAP5Q15398 846 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 TAB2Q9NYJ8 693 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 ZNF804BA4D1E1 1349 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 TMEM110-MUSTN1A8MSY1 372 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 ATG3Q9NT62 314 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 IMPACTQ9P2X3 320 aa15.26■□□□□ 0.03
C9orf47-203ENST00000375851 A2ML1A8K2U0 1454 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 PPIP5K2O43314 1243 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 GJC1P36383 396 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 CCDC155Q8N6L0 562 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 BLZF1Q9H2G9 400 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 POLA2Q14181 598 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 MICALCLQ6ZW33 695 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 PLCD4Q9BRC7 762 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 MAP3K4Q9Y6R4 1608 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 ARHGEF35A5YM69 484 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 EEF2P13639 858 aaKnown RBP15.25■□□□□ 0.03
C9orf47-203ENST00000375851 PDE6BP35913 854 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 PI16Q6UXB8 463 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 BLIDQ8IZY5 108 aa15.25■□□□□ 0.03
C9orf47-203ENST00000375851 PIGBQ92521 554 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 FERMT1Q9BQL6 677 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 RASAL2Q9UJF2 1139 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 DNM3Q9UQ16 869 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 CPSF1Q10570 1443 aaKnown RBP15.24■□□□□ 0.03
C9orf47-203ENST00000375851 CYP27B1O15528 508 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 GPT2Q8TD30 523 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 BIN2Q9UBW5 565 aaPredicted RBP15.24■□□□□ 0.03
C9orf47-203ENST00000375851 PCDHA7Q9UN72 937 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 PTCH1Q13635 1447 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 CCDC169A6NNP5 214 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 KLRF2D3W0D1 207 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 CMA1P23946 247 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 RAD51AP2Q09MP3 1159 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 TRERF1Q96PN7 1200 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 MED23Q9ULK4 1368 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 CLTCL1P53675 1640 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 ARHGAP6O43182 974 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 CYP26C1Q6V0L0 522 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 NSMFQ6X4W1 530 aa15.24■□□□□ 0.03
C9orf47-203ENST00000375851 XPO4Q9C0E2 1151 aaKnown RBP15.24■□□□□ 0.03
C9orf47-203ENST00000375851 ERCC3P19447 782 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 CUL4AQ13619 759 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 MSL1Q68DK7 614 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 KIAA0825Q8IV33 1275 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 FMNL3Q8IVF7 1028 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 ECM2O94769 699 aaPredicted RBP15.23■□□□□ 0.03
C9orf47-203ENST00000375851 TUBBP07437 444 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 MYCLP12524 364 aaPredicted RBP15.23■□□□□ 0.03
C9orf47-203ENST00000375851 SCG2P13521 617 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 SMTNP53814 917 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 EVCP57679 992 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 NCBP1Q09161 790 aaKnown RBP15.23■□□□□ 0.03
C9orf47-203ENST00000375851 NELFBQ8WX92 580 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 ARAP3Q8WWN8 1544 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 BTDP43251 543 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 KCNQ4P56696 695 aa15.23■□□□□ 0.03
C9orf47-203ENST00000375851 PLCB3Q01970 1234 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms