RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 RAD9BQ6WBX8 426 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 SALL1Q9NSC2 1324 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 MEGF6O75095 1541 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 HSP90B2PQ58FF3 399 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 GPKOWQ92917 476 aaPredicted RBP eCLIP13.41□□□□□ -0.26
MCF2L-202ENST00000375597 TEX13AQ9BXU3 409 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-202ENST00000375597 PP2D1A8MPX8 630 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 ADD2P35612 726 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 GPS2Q13227 327 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 LONRF2Q1L5Z9 754 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 TTLL11Q8NHH1 800 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 GOLGA1Q92805 767 aa13.41□□□□□ -0.26
MCF2L-202ENST00000375597 EPB41L4AQ9HCS5 686 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-202ENST00000375597 VEGFAP15692 232 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-202ENST00000375597 TOB1P50616 345 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-202ENST00000375597 ATP2B2Q01814 1243 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 FILIP1LQ4L180 1135 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 LY9Q9HBG7 655 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 LCMT1Q9UIC8 334 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 FAN1Q9Y2M0 1017 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 SYNRGQ9UMZ2 1314 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 RGPD2P0DJD1 1756 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 PSDA5PKW4 1024 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-202ENST00000375597 ZFYP08048 801 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-202ENST00000375597 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
MCF2L-202ENST00000375597 NLRP5P59047 1200 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 CC2D1AQ6P1N0 951 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-202ENST00000375597 FOXR1Q6PIV2 292 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 LRP10Q7Z4F1 713 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 ANKRD13CQ8N6S4 541 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 TC2NQ8N9U0 490 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 CALCOCO1Q9P1Z2 691 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 GDAQ9Y2T3 454 aa13.4□□□□□ -0.26
MCF2L-202ENST00000375597 MARF1Q9Y4F3 1742 aaKnown RBP13.39□□□□□ -0.27
MCF2L-202ENST00000375597 TRIM75PA6NK02 468 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 H3BQF6 201 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 UBXN1Q04323 297 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 ZSCAN26Q16670 478 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 SPATA5Q8NB90 893 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 NACAP1Q9BZK3 213 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 C19orf44Q9H6X5 657 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 A0A087X0B3 334 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 CUTAO60888 179 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 PTPAQ15257 358 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 ZNF654Q8IZM8 581 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 ALDH8A1Q9H2A2 487 aaPredicted RBP13.39□□□□□ -0.27
MCF2L-202ENST00000375597 TFCP2L1Q9NZI6 479 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 H2AFXP16104 143 aaPredicted RBP13.39□□□□□ -0.27
MCF2L-202ENST00000375597 FXR1P51114 621 aaKnown RBP eCLIP13.39□□□□□ -0.27
MCF2L-202ENST00000375597 RESP18Q5W5W9 173 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 TACC3Q9Y6A5 838 aa13.39□□□□□ -0.27
MCF2L-202ENST00000375597 TBC1D8O95759 1140 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 KRT9P35527 623 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 EIF5P55010 431 aaKnown RBP13.38□□□□□ -0.27
MCF2L-202ENST00000375597 CYP27A1Q02318 531 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 KIAA1328Q86T90 577 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 CENPHQ9H3R5 247 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 ABCB6Q9NP58 842 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 TNKSO95271 1327 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 CCP110O43303 1012 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 STARD3NLO95772 234 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 RAD51AP2Q09MP3 1159 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 DZIP3Q86Y13 1208 aaKnown RBP13.38□□□□□ -0.27
MCF2L-202ENST00000375597 NUTM2AQ8IVF1 878 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-202ENST00000375597 HPS3Q969F9 1004 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 PNKPQ96T60 521 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 JADE2Q9NQC1 790 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 SMARCAL1Q9NZC9 954 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 CXCR5P32302 372 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 AKNAD1Q5T1N1 836 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 IFIT1BQ5T764 474 aaKnown RBP13.38□□□□□ -0.27
MCF2L-202ENST00000375597 LEKR1Q6ZMV7 388 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 STRBPQ96SI9 672 aaKnown RBP13.38□□□□□ -0.27
MCF2L-202ENST00000375597 CHP1Q99653 195 aa13.38□□□□□ -0.27
MCF2L-202ENST00000375597 HEG1Q9ULI3 1381 aa13.37□□□□□ -0.27
MCF2L-202ENST00000375597 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
MCF2L-202ENST00000375597 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-202ENST00000375597 NOA1Q8NC60 698 aaKnown RBP13.37□□□□□ -0.27
MCF2L-202ENST00000375597 FAM107BQ9H098 131 aa13.37□□□□□ -0.27
MCF2L-202ENST00000375597 SOS2Q07890 1332 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-202ENST00000375597 ADAMTS2O95450 1211 aa13.37□□□□□ -0.27
MCF2L-202ENST00000375597 GOLGA8HP0CJ92 632 aa13.37□□□□□ -0.27
MCF2L-202ENST00000375597 ARID5AQ03989 594 aa13.37□□□□□ -0.27
MCF2L-202ENST00000375597 PTGDRQ13258 359 aa13.37□□□□□ -0.27
MCF2L-202ENST00000375597 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
MCF2L-202ENST00000375597 GOLGA6L1Q8N7Z2 621 aa13.37□□□□□ -0.27
MCF2L-202ENST00000375597 IGDCC4Q8TDY8 1250 aa13.37□□□□□ -0.27
MCF2L-202ENST00000375597 FAM217BQ9NTX9 383 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-202ENST00000375597 EFCAB8A8MWE9 144 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 PDE8BO95263 885 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 SSBP05455 408 aaKnown RBP eCLIP13.36□□□□□ -0.27
MCF2L-202ENST00000375597 CTSWP56202 376 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 CCDC178Q5BJE1 867 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 RASGRP2Q7LDG7 609 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 FANCBQ8NB91 859 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 PIGBQ92521 554 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 L2HGDHQ9H9P8 463 aa13.36□□□□□ -0.27
MCF2L-202ENST00000375597 AATFQ9NY61 560 aaKnown RBP eCLIP13.36□□□□□ -0.27
MCF2L-202ENST00000375597 CTAGE9A4FU28 777 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms