RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 STMN4Q9H169 189 aaPredicted RBP21.88■■□□□ 1.09
TGFBR1-201ENST00000374990 SAP30BPQ9UHR5 308 aaKnown RBP21.88■■□□□ 1.09
TGFBR1-201ENST00000374990 RIMBP2O15034 1052 aa21.88■■□□□ 1.09
TGFBR1-201ENST00000374990 MAPK8IP1Q9UQF2 711 aa21.88■■□□□ 1.09
TGFBR1-201ENST00000374990 ANKARQ7Z5J8 1434 aa21.88■■□□□ 1.09
TGFBR1-201ENST00000374990 TLR7Q9NYK1 1049 aaKnown RBP21.88■■□□□ 1.09
TGFBR1-201ENST00000374990 RCOR1Q9UKL0 485 aa21.88■■□□□ 1.09
TGFBR1-201ENST00000374990 CCNT1O60563 726 aaKnown RBP21.87■■□□□ 1.09
TGFBR1-201ENST00000374990 PI4K2BQ8TCG2 481 aa21.87■■□□□ 1.09
TGFBR1-201ENST00000374990 NECTIN1Q15223 517 aa21.87■■□□□ 1.09
TGFBR1-201ENST00000374990 REXO1Q8N1G1 1221 aaKnown RBP21.87■■□□□ 1.09
TGFBR1-201ENST00000374990 GPCPD1Q9NPB8 672 aa21.87■■□□□ 1.09
TGFBR1-201ENST00000374990 TNKSO95271 1327 aa21.87■■□□□ 1.09
TGFBR1-201ENST00000374990 SMAP1Q8IYB5 467 aaPredicted RBP21.87■■□□□ 1.09
TGFBR1-201ENST00000374990 NSUN7Q8NE18 718 aaKnown RBP21.87■■□□□ 1.09
TGFBR1-201ENST00000374990 B4DLN1 442 aa21.87■■□□□ 1.09
TGFBR1-201ENST00000374990 SLC39A14Q15043 492 aa21.87■■□□□ 1.09
TGFBR1-201ENST00000374990 MED23Q9ULK4 1368 aa21.87■■□□□ 1.09
TGFBR1-201ENST00000374990 MED14O60244 1454 aa21.87■■□□□ 1.09
TGFBR1-201ENST00000374990 PHACTR2O75167 634 aa21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 IL6STP40189 918 aaPredicted RBP21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 ADCY7P51828 1080 aa21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 PTPN12Q05209 780 aaKnown RBP21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 RAPGEF1Q13905 1077 aa21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 NBPF11Q86T75 865 aa21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 POLR3EQ9NVU0 708 aa21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 WWC3Q9ULE0 1092 aa21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 EPB41P11171 864 aaKnown RBP21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 KRBA2Q6ZNG9 492 aa21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 EBAG9O00559 213 aa21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 SNX29Q8TEQ0 813 aa21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 ZSCAN10Q96SZ4 725 aaPredicted RBP21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 MRVI1Q9Y6F6 885 aa21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 ETF1P62495 437 aaKnown RBP21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 CFAP58Q5T655 872 aa21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 CHAMP1Q96JM3 812 aa21.86■■□□□ 1.09
TGFBR1-201ENST00000374990 BTBD18B2RXH4 712 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 PNOCQ13519 176 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 ATRIPQ8WXE1 791 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 U2AF2P26368 475 aaKnown RBP eCLIP21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 UBE4AQ14139 1066 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 SLC9C1Q4G0N8 1177 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 ZNF589Q86UQ0 364 aaPredicted RBP21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 FERMT1Q9BQL6 677 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 TAB2Q9NYJ8 693 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 LMTK3Q96Q04 1460 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 VPS18Q9P253 973 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 FRMD4BQ9Y2L6 1034 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 DCAF8L1A6NGE4 600 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 GABPB1Q06547 395 aaPredicted RBP21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 ELF2Q15723 593 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 NUCKS1Q9H1E3 243 aaKnown RBP21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 RSPH14Q9UHP6 348 aa21.85■■□□□ 1.09
TGFBR1-201ENST00000374990 RNF17Q9BXT8 1623 aaKnown RBP21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 SASH1O94885 1247 aa21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 GALNT17Q6IS24 598 aa21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 APOA5Q6Q788 366 aa21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 TMEM94Q12767 1356 aa21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 NSRP1Q9H0G5 558 aaKnown RBP21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 TTLL12Q14166 644 aaPredicted RBP21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 CABP7Q86V35 215 aa21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 GIMAP7Q8NHV1 300 aa21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 NELFBQ8WX92 580 aa21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 JAKMIP2Q96AA8 810 aa21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 PUS3Q9BZE2 481 aaKnown RBP21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 GREM2Q9H772 168 aa21.84■■□□□ 1.09
TGFBR1-201ENST00000374990 MAGEA1P43355 309 aa21.83■■□□□ 1.09
TGFBR1-201ENST00000374990 TRMT44Q8IYL2 757 aaKnown RBP21.83■■□□□ 1.09
TGFBR1-201ENST00000374990 TCHPQ9BT92 498 aa21.83■■□□□ 1.09
TGFBR1-201ENST00000374990 VEZTQ9HBM0 779 aa21.83■■□□□ 1.09
TGFBR1-201ENST00000374990 ATP2A1O14983 1001 aa21.83■■□□□ 1.09
TGFBR1-201ENST00000374990 SLC1A4P43007 532 aa21.83■■□□□ 1.09
TGFBR1-201ENST00000374990 HERC4Q5GLZ8 1057 aaPredicted RBP21.83■■□□□ 1.09
TGFBR1-201ENST00000374990 NAP1L3Q99457 506 aaPredicted RBP21.83■■□□□ 1.09
TGFBR1-201ENST00000374990 MTRF1LQ9UGC7 380 aaKnown RBP21.83■■□□□ 1.09
TGFBR1-201ENST00000374990 RPGRIP1Q96KN7 1286 aa21.83■■□□□ 1.09
TGFBR1-201ENST00000374990 PHKA1P46020 1223 aa21.83■■□□□ 1.08
TGFBR1-201ENST00000374990 DCAF17Q5H9S7 520 aaPredicted RBP21.83■■□□□ 1.08
TGFBR1-201ENST00000374990 OR8K1Q8NGG5 319 aa21.83■■□□□ 1.08
TGFBR1-201ENST00000374990 MTUS1Q9ULD2 1270 aa21.83■■□□□ 1.08
TGFBR1-201ENST00000374990 IKBKGQ9Y6K9 419 aa21.83■■□□□ 1.08
TGFBR1-201ENST00000374990 NCAPD2Q15021 1401 aa21.83■■□□□ 1.08
TGFBR1-201ENST00000374990 FCHSD1Q86WN1 690 aa21.83■■□□□ 1.08
TGFBR1-201ENST00000374990 LRRC8AQ8IWT6 810 aa21.83■■□□□ 1.08
TGFBR1-201ENST00000374990 BLIDQ8IZY5 108 aa21.83■■□□□ 1.08
TGFBR1-201ENST00000374990 WDR17Q8IZU2 1322 aa21.82■■□□□ 1.08
TGFBR1-201ENST00000374990 A6NNZ2 444 aa21.82■■□□□ 1.08
TGFBR1-201ENST00000374990 NDUFA8P51970 172 aa21.82■■□□□ 1.08
TGFBR1-201ENST00000374990 TUBB8Q3ZCM7 444 aa21.82■■□□□ 1.08
TGFBR1-201ENST00000374990 PLCD4Q9BRC7 762 aa21.82■■□□□ 1.08
TGFBR1-201ENST00000374990 ADGRL3Q9HAR2 1447 aa21.82■■□□□ 1.08
TGFBR1-201ENST00000374990 PPP6R2O75170 966 aa21.82■■□□□ 1.08
TGFBR1-201ENST00000374990 SECISBP2LQ93073 1101 aaKnown RBP21.82■■□□□ 1.08
TGFBR1-201ENST00000374990 DDAH1O94760 285 aa21.82■■□□□ 1.08
TGFBR1-201ENST00000374990 NT5C3AQ9H0P0 336 aa21.82■■□□□ 1.08
TGFBR1-201ENST00000374990 NOX5Q96PH1 765 aa21.82■■□□□ 1.08
TGFBR1-201ENST00000374990 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.82■■□□□ 1.08
TGFBR1-201ENST00000374990 PSDA5PKW4 1024 aaPredicted RBP21.81■■□□□ 1.08
TGFBR1-201ENST00000374990 LRMPQ12912 555 aa21.81■■□□□ 1.08
TGFBR1-201ENST00000374990 CALCRLQ16602 461 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms