RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 FKBP15Q5T1M5 1219 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 TMCO1Q9UM00 188 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 KRT14P02533 472 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 MCF2L2Q86YR7 1114 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 C3orf20Q8ND61 904 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 HPS1Q92902 700 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 ZSCAN31Q96LW9 406 aaPredicted RBP9.69□□□□□ -0.86
ABCA1-202ENST00000374736 DCTN2Q13561 401 aaKnown RBP9.69□□□□□ -0.86
ABCA1-202ENST00000374736 ARHGEF25Q86VW2 580 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 TRPC7Q9HCX4 862 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 AK9Q5TCS8 1911 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 ATXN2Q99700 1313 aaKnown RBP9.69□□□□□ -0.86
ABCA1-202ENST00000374736 FAM25AB3EWG3 89 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 FAM25CB3EWG5 89 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 FAM25GB3EWG6 89 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 KRT20P35900 424 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 IFT20Q8IY31 132 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 NDE1Q9NXR1 346 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 CALCOCO2Q13137 446 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 SH3KBP1Q96B97 665 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 A1CFQ9NQ94 594 aaKnown RBP9.69□□□□□ -0.86
ABCA1-202ENST00000374736 KLHL14Q9P2G3 628 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 G3BP2Q9UN86 482 aaKnown RBP9.69□□□□□ -0.86
ABCA1-202ENST00000374736 MAIP1Q8WWC4 291 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 STMN3Q9NZ72 180 aa9.69□□□□□ -0.86
ABCA1-202ENST00000374736 GNB5O14775 395 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 CHGAP10645 457 aaKnown RBP9.68□□□□□ -0.86
ABCA1-202ENST00000374736 ADAM21Q9UKJ8 722 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 DRAXINQ8NBI3 349 aaPredicted RBP9.68□□□□□ -0.86
ABCA1-202ENST00000374736 EHMT1Q9H9B1 1298 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 CCDC166P0CW27 439 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 KRT13P13646 458 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 PPP6R3Q5H9R7 873 aaPredicted RBP9.68□□□□□ -0.86
ABCA1-202ENST00000374736 ANKRD45Q5TZF3 282 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 PPP4R3AQ6IN85 833 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 BRD8Q9H0E9 1235 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 DDX21Q9NR30 783 aaKnown RBP eCLIP9.68□□□□□ -0.86
ABCA1-202ENST00000374736 BRD1O95696 1058 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 C4BPBP20851 252 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 GUCY2FP51841 1108 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 POLR2FP61218 127 aaKnown RBP9.68□□□□□ -0.86
ABCA1-202ENST00000374736 LETM2Q2VYF4 491 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 LSM14AQ8ND56 463 aaKnown RBP9.68□□□□□ -0.86
ABCA1-202ENST00000374736 PNMA6AP0CW24 399 aaPredicted RBP9.68□□□□□ -0.86
ABCA1-202ENST00000374736 ARHGEF2Q92974 986 aaKnown RBP9.68□□□□□ -0.86
ABCA1-202ENST00000374736 SIKE1Q9BRV8 207 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 CD209Q9NNX6 404 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 POTEIP0CG38 1075 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 CEP70Q8NHQ1 597 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 RNASE11Q8TAA1 199 aaKnown RBP9.68□□□□□ -0.86
ABCA1-202ENST00000374736 FHDC1Q9C0D6 1143 aaPredicted RBP9.68□□□□□ -0.86
ABCA1-202ENST00000374736 TDRD12Q587J7 1177 aaKnown RBP9.68□□□□□ -0.86
ABCA1-202ENST00000374736 SLC4A10Q6U841 1118 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 CALML6Q8TD86 181 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 MMADHCQ9H3L0 296 aaPredicted RBP9.68□□□□□ -0.86
ABCA1-202ENST00000374736 PHLPP2Q6ZVD8 1323 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 KRT86O43790 486 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 GNAT2P19087 354 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 RIPK4P57078 832 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 SNX16P57768 344 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 VCPKMTQ9H867 229 aa9.68□□□□□ -0.86
ABCA1-202ENST00000374736 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.68□□□□□ -0.869e-6■□□□□ 8.4
ABCA1-202ENST00000374736 RASGRF2O14827 1237 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 USP37Q86T82 979 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 ATAD3AQ9NVI7 634 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 MRPS15P82914 257 aaKnown RBP9.67□□□□□ -0.86
ABCA1-202ENST00000374736 TBL3Q12788 808 aaKnown RBP9.67□□□□□ -0.86
ABCA1-202ENST00000374736 ACAP2Q15057 778 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 PDXDC1Q6P996 788 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 CCDC28BQ9BUN5 200 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 SLC38A10Q9HBR0 1119 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 HSPA1AP0DMV8 641 aaKnown RBP9.67□□□□□ -0.86
ABCA1-202ENST00000374736 HSPA1BP0DMV9 641 aaKnown RBP9.67□□□□□ -0.86
ABCA1-202ENST00000374736 TMEM259Q4ZIN3 620 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 GALNT6Q8NCL4 622 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 PLVAPQ9BX97 442 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 EVLQ9UI08 416 aaPredicted RBP9.67□□□□□ -0.86
ABCA1-202ENST00000374736 TULP2O00295 520 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 ADCY3O60266 1144 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 PHACTR2O75167 634 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 ARHGAP44Q17R89 818 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 TRAPPC9Q96Q05 1148 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 UACAQ9BZF9 1416 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 CCND1P24385 295 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 SAFBQ15424 915 aaKnown RBP eCLIP9.67□□□□□ -0.86
ABCA1-202ENST00000374736 SLC39A3Q9BRY0 314 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 FAM204AQ9H8W3 233 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 NKIRAS1Q9NYS0 192 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 ZC3H18Q86VM9 953 aaKnown RBP9.67□□□□□ -0.86
ABCA1-202ENST00000374736 MKL1Q969V6 931 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 SSX2IPQ9Y2D8 614 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 PARNO95453 639 aaKnown RBP9.67□□□□□ -0.86
ABCA1-202ENST00000374736 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
ABCA1-202ENST00000374736 KRT15P19012 456 aa9.66□□□□□ -0.86
ABCA1-202ENST00000374736 ACADVLP49748 655 aa9.66□□□□□ -0.86
ABCA1-202ENST00000374736 CADPS2Q86UW7 1296 aa9.66□□□□□ -0.86
ABCA1-202ENST00000374736 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.66□□□□□ -0.863e-6■■□□□ 12.4
ABCA1-202ENST00000374736 LRPAP1P30533 357 aa9.66□□□□□ -0.86
ABCA1-202ENST00000374736 GOLGA8FQ08AF8 430 aa9.66□□□□□ -0.86
ABCA1-202ENST00000374736 GOLGA8DPQ0D2H9 430 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms