RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 MIGA1Q8NAN2 632 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 ZBTB21Q9ULJ3 1066 aa7.07□□□□□ -1.28
PTPN3-202ENST00000374541 SLFN5Q08AF3 891 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 GBP6Q6ZN66 633 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 POTEDQ86YR6 584 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 LMNTD2Q8IXW0 634 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 CACNA2D3Q8IZS8 1091 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 ATRIPQ8WXE1 791 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 RBM28Q9NW13 759 aaKnown RBP7.06□□□□□ -1.28
PTPN3-202ENST00000374541 MTRF1LQ9UGC7 380 aaKnown RBP7.06□□□□□ -1.28
PTPN3-202ENST00000374541 ARHGEF40Q8TER5 1519 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 CLGNO14967 610 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 MYL3P08590 195 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 ARID4AP29374 1257 aaPredicted RBP7.06□□□□□ -1.28
PTPN3-202ENST00000374541 GMPSP49915 693 aaPredicted RBP7.06□□□□□ -1.28
PTPN3-202ENST00000374541 PRPF4BQ13523 1007 aaKnown RBP7.06□□□□□ -1.28
PTPN3-202ENST00000374541 CCDC14Q49A88 953 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 EVI5LQ96CN4 794 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 LGR6Q9HBX8 967 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 N4BP3O15049 544 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 KRT86O43790 486 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 TBCAO75347 108 aaKnown RBP7.06□□□□□ -1.28
PTPN3-202ENST00000374541 CCDC94Q9BW85 323 aaPredicted RBP7.06□□□□□ -1.28
PTPN3-202ENST00000374541 NACA2Q9H009 215 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 MFSD1Q9H3U5 465 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 A0A1B0GUL7 405 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 CCDC160A6NGH7 325 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 CIB2O75838 187 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 NBPF7P0C2Y1 421 aaPredicted RBP7.06□□□□□ -1.28
PTPN3-202ENST00000374541 EDC4Q6P2E9 1401 aaKnown RBP7.06□□□□□ -1.28
PTPN3-202ENST00000374541 B4GALNT4Q76KP1 1039 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 TRIM7Q9C029 511 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 PIDD1Q9HB75 910 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 TRMT1Q9NXH9 659 aaKnown RBP7.06□□□□□ -1.28
PTPN3-202ENST00000374541 IFT172Q9UG01 1749 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 LEMD3Q9Y2U8 911 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 ERBB3P21860 1342 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 ZNF213O14771 459 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 IL15P40933 162 aaPredicted RBP7.06□□□□□ -1.28
PTPN3-202ENST00000374541 UBA7P41226 1012 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 ARID5AQ03989 594 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 PUM3Q15397 648 aaKnown RBP7.06□□□□□ -1.28
PTPN3-202ENST00000374541 SPAG5Q96R06 1193 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 RASSF4Q9H2L5 321 aa7.06□□□□□ -1.28
PTPN3-202ENST00000374541 CTAGE9A4FU28 777 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 RBM25P49756 843 aaKnown RBP7.05□□□□□ -1.28
PTPN3-202ENST00000374541 ZBTB16Q05516 673 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 BMP2KLQ5H9B9 411 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 C10orf67Q8IYJ2 551 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 MSANTD4Q8NCY6 345 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 RNF208Q9H0X6 261 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 EXOC1Q9NV70 894 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 CA12O43570 354 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 CETPP11597 493 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 CAPN2P17655 700 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 TNNC1P63316 161 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 ANGEL2Q5VTE6 544 aaKnown RBP7.05□□□□□ -1.28
PTPN3-202ENST00000374541 RPUSD2Q8IZ73 545 aaKnown RBP7.05□□□□□ -1.28
PTPN3-202ENST00000374541 CPLX3Q8WVH0 158 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 VCX3BQ9H321 246 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 PKD2L1Q9P0L9 805 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 GRM8O00222 908 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 NDC80O14777 642 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 TPD52P55327 224 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-202ENST00000374541 GRAPQ13588 217 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 ERCC6LQ2NKX8 1250 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 MFSD6Q6ZSS7 791 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 ZNF354CQ86Y25 554 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 GRAPLQ8TC17 118 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-202ENST00000374541 MIPOL1Q8TD10 442 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 CASQ2O14958 399 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-202ENST00000374541 GMNNO75496 209 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 VAV2P52735 878 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 NOLC1Q14978 699 aaKnown RBP eCLIP7.05□□□□□ -1.28
PTPN3-202ENST00000374541 TCERG1LQ5VWI1 586 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 MAGEB6Q8N7X4 407 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 GLG1Q92896 1179 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 OGFRQ9NZT2 677 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 MSRAQ9UJ68 235 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 POLR1AO95602 1720 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-202ENST00000374541 ZNF804BA4D1E1 1349 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 PTPRCP08575 1304 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 SEC24BO95487 1268 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 DNM2P50570 870 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 RNASELQ05823 741 aaKnown RBP7.05□□□□□ -1.28
PTPN3-202ENST00000374541 MARCH10Q8NA82 808 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-202ENST00000374541 CCDC114Q96M63 670 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 PAIP2Q9BPZ3 127 aaKnown RBP7.05□□□□□ -1.28
PTPN3-202ENST00000374541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.05□□□□□ -1.284e-6■■■■□ 19.3
PTPN3-202ENST00000374541 POLKQ9UBT6 870 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 ATP11BQ9Y2G3 1177 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 SPATA31E1Q6ZUB1 1445 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 UBE2Q2LH0YL09 131 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 CALML3P27482 149 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 PPP1R2P41236 205 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 MAP7Q14244 749 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 STMN2Q93045 179 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 RNF216Q9NWF9 866 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-202ENST00000374541 ZHX2Q9Y6X8 837 aa7.05□□□□□ -1.28
PTPN3-202ENST00000374541 MAP3K15Q6ZN16 1313 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms