RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 ZNF18P17022 549 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 BMP6P22004 513 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 PLCD1P51178 756 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 PDE4BQ07343 736 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 PPARAQ07869 468 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 TBX2Q13207 712 aaPredicted RBP13.03□□□□□ -0.32
PTPN20-204ENST00000374346 TAF3Q5VWG9 929 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 TMCO3Q6UWJ1 677 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 CREBRFQ8IUR6 639 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 CCDC82Q8N4S0 544 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 FAM53CQ9NYF3 392 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 PCDHB6Q9Y5E3 794 aa13.03□□□□□ -0.32
PTPN20-204ENST00000374346 TRIM75PA6NK02 468 aa13.02□□□□□ -0.32
PTPN20-204ENST00000374346 UBE2Q2LH0YL09 131 aa13.02□□□□□ -0.32
PTPN20-204ENST00000374346 FOXN1O15353 648 aa13.02□□□□□ -0.32
PTPN20-204ENST00000374346 PARP10Q53GL7 1025 aa13.02□□□□□ -0.32
PTPN20-204ENST00000374346 CTAGE1Q96RT6 745 aa13.02□□□□□ -0.32
PTPN20-204ENST00000374346 CABP5Q9NP86 173 aa13.02□□□□□ -0.32
PTPN20-204ENST00000374346 RAI14Q9P0K7 980 aa13.02□□□□□ -0.32
PTPN20-204ENST00000374346 PRKAB2O43741 272 aa13.02□□□□□ -0.33
PTPN20-204ENST00000374346 GNL3LQ9NVN8 582 aaKnown RBP13.02□□□□□ -0.33
PTPN20-204ENST00000374346 BTG4Q9NY30 223 aa13.02□□□□□ -0.33
PTPN20-204ENST00000374346 EXOC5O00471 708 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 ATP2B1P20020 1258 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 KRT2P35908 639 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 CLCN6P51797 869 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 NR5A1Q13285 461 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 TERF2Q15554 542 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 TMEM139Q8IV31 216 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 FERMT2Q96AC1 680 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 SLC4A9Q96Q91 983 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 NAA15Q9BXJ9 866 aaKnown RBP13.01□□□□□ -0.33
PTPN20-204ENST00000374346 CSRNP2Q9H175 543 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 RBM28Q9NW13 759 aaKnown RBP13.01□□□□□ -0.33
PTPN20-204ENST00000374346 AATFQ9NY61 560 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTPN20-204ENST00000374346 VWA3AA6NCI4 1184 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 ACTN4O43707 911 aaKnown RBP13.01□□□□□ -0.33
PTPN20-204ENST00000374346 CALM1P0DP23 149 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 CALM2P0DP24 149 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 CALM3P0DP25 149 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 PCP11498 1178 aaKnown RBP13.01□□□□□ -0.33
PTPN20-204ENST00000374346 BCAMP50895 628 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 GNG11P61952 73 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 FILIP1LQ4L180 1135 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 HSP90AA4PQ58FG1 418 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 CATIPQ7Z7H3 387 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 TC2NQ8N9U0 490 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 MIGA1Q8NAN2 632 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 SPATA20Q8TB22 786 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 INTS13Q9NVM9 706 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 PARP3Q9Y6F1 533 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 TNKSO95271 1327 aa13.01□□□□□ -0.33
PTPN20-204ENST00000374346 MAGEB6P1A0A0J9YX57 407 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 MINDY4BA8MYZ0 360 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 ATP8B1O43520 1251 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 PRR29P0C7W0 189 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 CYP7A1P22680 504 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 GRIN1Q05586 938 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 FMR1Q06787 632 aaKnown RBP eCLIP13□□□□□ -0.33
PTPN20-204ENST00000374346 SUSD4Q5VX71 490 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 PPFIBP1Q86W92 1011 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 IQCA1Q86XH1 822 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 FAM177A1Q8N128 213 aaPredicted RBP13□□□□□ -0.33
PTPN20-204ENST00000374346 CDC5LQ99459 802 aaKnown RBP13□□□□□ -0.33
PTPN20-204ENST00000374346 PYM1Q9BRP8 204 aaKnown RBP13□□□□□ -0.33
PTPN20-204ENST00000374346 ANAPC4Q9UJX5 808 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 PLCH1Q4KWH8 1693 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 AKR1B15C9JRZ8 316 aaPredicted RBP13□□□□□ -0.33
PTPN20-204ENST00000374346 CCDC175P0C221 793 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 ADKP55263 362 aaKnown RBP13□□□□□ -0.33
PTPN20-204ENST00000374346 NR1I3Q14994 352 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 CMTR1Q8N1G2 835 aaKnown RBP13□□□□□ -0.33
PTPN20-204ENST00000374346 PANX2Q96RD6 677 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 ZNF446Q9NWS9 450 aa13□□□□□ -0.33
PTPN20-204ENST00000374346 A0A1B0GTH6 734 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 TADA3O75528 432 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 SLFN14P0C7P3 912 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 IFIT1BQ5T764 474 aaKnown RBP12.99□□□□□ -0.33
PTPN20-204ENST00000374346 SPATA1Q5VX52 437 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 TRMT44Q8IYL2 757 aaKnown RBP12.99□□□□□ -0.33
PTPN20-204ENST00000374346 DHX58Q96C10 678 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 GSDMAQ96QA5 445 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 CARD6Q9BX69 1037 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 TACC3Q9Y6A5 838 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 SYNRGQ9UMZ2 1314 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 PRPF3O43395 683 aaKnown RBP12.99□□□□□ -0.33
PTPN20-204ENST00000374346 IGSF3O75054 1194 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 EIF5P55010 431 aaKnown RBP12.99□□□□□ -0.33
PTPN20-204ENST00000374346 GOLGA8FQ08AF8 430 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 GOLGA8DPQ0D2H9 430 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 GPR161Q8N6U8 529 aaKnown RBP12.99□□□□□ -0.33
PTPN20-204ENST00000374346 ZSCAN10Q96SZ4 725 aaPredicted RBP12.99□□□□□ -0.33
PTPN20-204ENST00000374346 SEC31BQ9NQW1 1179 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 ABCF2Q9UG63 623 aa12.99□□□□□ -0.33
PTPN20-204ENST00000374346 MYH2Q9UKX2 1941 aa12.98□□□□□ -0.33
PTPN20-204ENST00000374346 CCDC66A2RUB6 948 aa12.98□□□□□ -0.33
PTPN20-204ENST00000374346 SEMA3EO15041 775 aa12.98□□□□□ -0.33
PTPN20-204ENST00000374346 MAP3K9P80192 1104 aa12.98□□□□□ -0.33
PTPN20-204ENST00000374346 SEC23AQ15436 765 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms