RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CTNND2Q9UQB3 1225 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 ZBTB7BO15156 539 aaPredicted RBP15.99■□□□□ 0.15
TRAF1-201ENST00000373887 TXKP42681 527 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 PDE1CQ14123 709 aaPredicted RBP15.99■□□□□ 0.15
TRAF1-201ENST00000373887 GADL1Q6ZQY3 521 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 FMNL3Q8IVF7 1028 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 CLSTN2Q9H4D0 955 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 MTUS1Q9ULD2 1270 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 PZPP20742 1482 aa15.98■□□□□ 0.15
TRAF1-201ENST00000373887 SARNPP82979 210 aaKnown RBP15.98■□□□□ 0.15
TRAF1-201ENST00000373887 ASAP1Q9ULH1 1129 aa15.98■□□□□ 0.15
TRAF1-201ENST00000373887 ZBED4O75132 1171 aa15.98■□□□□ 0.15
TRAF1-201ENST00000373887 ZNF131P52739 623 aa15.98■□□□□ 0.15
TRAF1-201ENST00000373887 RPS8P62241 208 aaKnown RBP15.98■□□□□ 0.15
TRAF1-201ENST00000373887 DPY19L2Q6NUT2 758 aa15.98■□□□□ 0.15
TRAF1-201ENST00000373887 CCDC170Q8IYT3 715 aa15.98■□□□□ 0.15
TRAF1-201ENST00000373887 RNF34Q969K3 372 aa15.98■□□□□ 0.15
TRAF1-201ENST00000373887 EDC3Q96F86 508 aaKnown RBP15.98■□□□□ 0.15
TRAF1-201ENST00000373887 TACC3Q9Y6A5 838 aa15.98■□□□□ 0.15
TRAF1-201ENST00000373887 CLUL1Q15846 466 aa15.98■□□□□ 0.15
TRAF1-201ENST00000373887 ERVV-2B6SEH9 535 aa15.98■□□□□ 0.15
TRAF1-201ENST00000373887 CASQ2O14958 399 aaPredicted RBP15.98■□□□□ 0.15
TRAF1-201ENST00000373887 CCDC122Q5T0U0 273 aa15.98■□□□□ 0.15
TRAF1-201ENST00000373887 HS2ST1Q7LGA3 356 aa15.98■□□□□ 0.15
TRAF1-201ENST00000373887 KIAA0232Q92628 1395 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 ARID4AP29374 1257 aaPredicted RBP15.97■□□□□ 0.15
TRAF1-201ENST00000373887 RAD51AP2Q09MP3 1159 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 BIRC3Q13489 604 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 OTUD7BQ6GQQ9 843 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 MROH5Q6ZUA9 1318 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 SLC27A2O14975 620 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 U2AF2P26368 475 aaKnown RBP eCLIP15.97■□□□□ 0.15
TRAF1-201ENST00000373887 CNGA1P29973 690 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 GBP7Q8N8V2 638 aaPredicted RBP15.97■□□□□ 0.15
TRAF1-201ENST00000373887 FAM204AQ9H8W3 233 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 BCAMP50895 628 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 FYB2Q5VWT5 728 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 HDXQ7Z353 690 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 CCDC117Q8IWD4 279 aaPredicted RBP15.97■□□□□ 0.15
TRAF1-201ENST00000373887 ZNF335Q9H4Z2 1342 aaPredicted RBP15.97■□□□□ 0.15
TRAF1-201ENST00000373887 BUB1BO60566 1050 aaPredicted RBP15.97■□□□□ 0.15
TRAF1-201ENST00000373887 CRKLP46109 303 aaKnown RBP15.97■□□□□ 0.15
TRAF1-201ENST00000373887 GPIHBP1Q8IV16 184 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 JAKMIP2Q96AA8 810 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 TSGA10Q9BZW7 698 aa15.97■□□□□ 0.15
TRAF1-201ENST00000373887 FRMPD2Q68DX3 1309 aaPredicted RBP15.96■□□□□ 0.15
TRAF1-201ENST00000373887 EP400NLQ6ZTU2 488 aa15.96■□□□□ 0.15
TRAF1-201ENST00000373887 CSADQ9Y600 493 aa15.96■□□□□ 0.15
TRAF1-201ENST00000373887 NEURL1BA8MQ27 555 aa15.96■□□□□ 0.15
TRAF1-201ENST00000373887 UTP14CQ5TAP6 766 aaKnown RBP15.96■□□□□ 0.15
TRAF1-201ENST00000373887 ARHGEF2Q92974 986 aaKnown RBP15.96■□□□□ 0.15
TRAF1-201ENST00000373887 PHKBQ93100 1093 aa15.96■□□□□ 0.15
TRAF1-201ENST00000373887 SPOPO43791 374 aa15.96■□□□□ 0.15
TRAF1-201ENST00000373887 MAPK8IP1Q9UQF2 711 aa15.96■□□□□ 0.15
TRAF1-201ENST00000373887 XRCC6P12956 609 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRAF1-201ENST00000373887 PPP2R3AQ06190 1150 aa15.96■□□□□ 0.15
TRAF1-201ENST00000373887 APPBP2Q92624 585 aa15.96■□□□□ 0.15
TRAF1-201ENST00000373887 TBC1D7Q9P0N9 293 aa15.96■□□□□ 0.15
TRAF1-201ENST00000373887 CHL1O00533 1208 aa15.96■□□□□ 0.14
TRAF1-201ENST00000373887 SPOUT1Q5T280 376 aaKnown RBP15.96■□□□□ 0.14
TRAF1-201ENST00000373887 CCDC94Q9BW85 323 aaPredicted RBP15.96■□□□□ 0.14
TRAF1-201ENST00000373887 CPSF2Q9P2I0 782 aaKnown RBP15.96■□□□□ 0.14
TRAF1-201ENST00000373887 GABPAQ06546 454 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 SDCCAG8Q86SQ7 713 aaPredicted RBP15.95■□□□□ 0.14
TRAF1-201ENST00000373887 CACNA2D3Q8IZS8 1091 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 CMTR1Q8N1G2 835 aaKnown RBP15.95■□□□□ 0.14
TRAF1-201ENST00000373887 ARFGAP2Q8N6H7 521 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 LUC7L2Q9Y383 392 aaKnown RBP15.95■□□□□ 0.14
TRAF1-201ENST00000373887 MYCP01106 439 aaPredicted RBP15.95■□□□□ 0.14
TRAF1-201ENST00000373887 TRIM31Q9BZY9 425 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 TRIM6Q9C030 488 aaPredicted RBP15.95■□□□□ 0.14
TRAF1-201ENST00000373887 ZKSCAN5Q9Y2L8 839 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 LOC102724428A0A0B4J2F2 783 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 SIK1P57059 783 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 AFAP1L1Q8TED9 768 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 A0A1B0GVL5 298 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 FAM47CQ5HY64 1035 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 FAM196AQ6ZSG2 479 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 PIK3C2GO75747 1445 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 CLRN2A0PK11 232 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 TXNDC9O14530 226 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 TFAP4Q01664 338 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 BRDTQ58F21 947 aaPredicted RBP15.95■□□□□ 0.14
TRAF1-201ENST00000373887 VCX3BQ9H321 246 aa15.95■□□□□ 0.14
TRAF1-201ENST00000373887 RPS6KB1P23443 525 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 CCDC26Q8TAB7 109 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 TEKT1Q969V4 418 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 FAM184BQ9ULE4 1060 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 MKRN3Q13064 507 aaKnown RBP15.94■□□□□ 0.14
TRAF1-201ENST00000373887 SV2BQ7L1I2 683 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 DCPSQ96C86 337 aaKnown RBP15.94■□□□□ 0.14
TRAF1-201ENST00000373887 NUF2Q9BZD4 464 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 GBP1P32455 592 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 GPR161Q8N6U8 529 aaKnown RBP15.94■□□□□ 0.14
TRAF1-201ENST00000373887 SDR42E1Q8WUS8 393 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 EVCP57679 992 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 ITIH3Q06033 890 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 KRT27Q7Z3Y8 459 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 IL17REQ8NFR9 667 aa15.94■□□□□ 0.14
TRAF1-201ENST00000373887 FNBP1Q96RU3 617 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms