RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 SPAG5Q96R06 1193 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 CYP19A1P11511 503 aaPredicted RBP11.93□□□□□ -0.5
PGK1-201ENST00000373316 ATP5DP30049 168 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 SEMA3FQ13275 785 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 GIMAP7Q8NHV1 300 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 SNRKQ9NRH2 765 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 KCNH3Q9ULD8 1083 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 KCPQ6ZWJ8 1503 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 TIMM10P62072 90 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 CCDC174Q6PII3 467 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.93□□□□□ -0.5
PGK1-201ENST00000373316 ABCC12Q96J65 1359 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 LOC102724428A0A0B4J2F2 783 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 TRIM37O94972 964 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 SIK1P57059 783 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 ASIC1P78348 528 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 HAUS3Q68CZ6 603 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 IFNKQ9P0W0 207 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 PXDNLA1KZ92 1463 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 BCL9LQ86UU0 1499 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 MYL1P05976 194 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 CRKLP46109 303 aaKnown RBP11.92□□□□□ -0.5
PGK1-201ENST00000373316 SV2BQ7L1I2 683 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 MSANTD4Q8NCY6 345 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 HELBQ8NG08 1087 aaPredicted RBP11.92□□□□□ -0.5
PGK1-201ENST00000373316 LRRC45Q96CN5 670 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 WDR19Q8NEZ3 1342 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 PSDA5PKW4 1024 aaPredicted RBP11.92□□□□□ -0.5
PGK1-201ENST00000373316 CFAP58Q5T655 872 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 RGS22Q8NE09 1264 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 MTA3Q9BTC8 594 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 PTGS1P23219 599 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 NF2P35240 595 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 POLA2Q14181 598 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 VTI1AQ96AJ9 217 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 NAPGQ99747 312 aaPredicted RBP11.92□□□□□ -0.5
PGK1-201ENST00000373316 PANK2Q9BZ23 570 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 ALDH8A1Q9H2A2 487 aaPredicted RBP11.92□□□□□ -0.5
PGK1-201ENST00000373316 CUEDC2Q9H467 287 aa11.92□□□□□ -0.5
PGK1-201ENST00000373316 AHDC1Q5TGY3 1603 aaPredicted RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 DISP2A7MBM2 1401 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 WTIPA6NIX2 430 aaPredicted RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 IDEP14735 1019 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 ARPP21Q9UBL0 812 aaPredicted RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 PARP4Q9UKK3 1724 aaKnown RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 BCL9O00512 1426 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 CCDC84Q86UT8 332 aaPredicted RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 SREK1Q8WXA9 508 aaKnown RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 CENPHQ9H3R5 247 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 hCG_1984214I3L0E3 225 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 LAD1O00515 517 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 ATP2A1O14983 1001 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 WDHD1O75717 1129 aaPredicted RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 CMA1P23946 247 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 TRAPPC10P48553 1259 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 BRD3Q15059 726 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 HS2ST1Q7LGA3 356 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 MAGEB6Q8N7X4 407 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 ZNF713Q8N859 430 aaPredicted RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 CPLX3Q8WVH0 158 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 XAGE2Q96GT9 111 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 RBM17Q96I25 401 aaKnown RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 CBX8Q9HC52 389 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 ZMYM6O95789 1325 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 DDAH1O94760 285 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 KIF4AO95239 1232 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 PCCAP05165 728 aaPredicted RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 LDHBP07195 334 aaKnown RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 PARP1P09874 1014 aaKnown RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 UBE3CQ15386 1083 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 TBC1D22AQ8WUA7 517 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 PODXL2Q9NZ53 605 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 SRP68Q9UHB9 627 aaKnown RBP11.91□□□□□ -0.5
PGK1-201ENST00000373316 NIP7Q9Y221 180 aaKnown RBP eCLIP11.91□□□□□ -0.5
PGK1-201ENST00000373316 PLCH1Q4KWH8 1693 aa11.91□□□□□ -0.5
PGK1-201ENST00000373316 PATL2C9JE40 543 aaKnown RBP11.9□□□□□ -0.5
PGK1-201ENST00000373316 FANCCQ00597 558 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 SPATS2Q86XZ4 545 aaKnown RBP11.9□□□□□ -0.5
PGK1-201ENST00000373316 ANKS4BQ8N8V4 417 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 CCDC26Q8TAB7 109 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 MAP4K1Q92918 833 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 DHX58Q96C10 678 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 MYO1AQ9UBC5 1043 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 CARMIL3Q8ND23 1372 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 MED23Q9ULK4 1368 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 PPP6R2O75170 966 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 STAMBPO95630 424 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 WHAMMP3Q1A5X7 153 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 C6orf163Q5TEZ5 329 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 SYCP3Q8IZU3 236 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 MTRF1LQ9UGC7 380 aaKnown RBP11.9□□□□□ -0.5
PGK1-201ENST00000373316 MATR3P43243 847 aaKnown RBP eCLIP11.9□□□□□ -0.53e-9■■■□□ 18.2
PGK1-201ENST00000373316 UBXN1Q04323 297 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 HLTFQ14527 1009 aaKnown RBP eCLIP11.9□□□□□ -0.5
PGK1-201ENST00000373316 B4GALNT4Q76KP1 1039 aa11.9□□□□□ -0.5
PGK1-201ENST00000373316 PTPN12Q05209 780 aaKnown RBP11.89□□□□□ -0.51
PGK1-201ENST00000373316 TCIRG1Q13488 830 aa11.89□□□□□ -0.51
PGK1-201ENST00000373316 APBB1IPQ7Z5R6 666 aaPredicted RBP11.89□□□□□ -0.51
PGK1-201ENST00000373316 TAX1BP1Q86VP1 789 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 564.5 ms