RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 TMEM87BQ96K49 555 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 TTC14Q96N46 770 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 TCP11L1Q9NUJ3 509 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 SSC5DA1L4H1 1573 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 FAM196BA6NMK8 535 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 PRC1O43663 620 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 ST18O60284 1047 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 TSPY3P0CV98 308 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 TSPY8P0CW00 308 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 CPA1P15085 419 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 TFAP4Q01664 338 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 CERKLQ49MI3 558 aaPredicted RBP18.68■□□□□ 0.58
TMEM53-204ENST00000372243 IQCA1Q86XH1 822 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 NEDD1Q8NHV4 660 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 AGXT2Q9BYV1 514 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 GLIS2Q9BZE0 524 aaPredicted RBP18.68■□□□□ 0.58
TMEM53-204ENST00000372243 PDRG1Q9NUG6 133 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 SLURP2P0DP57 97 aa18.67■□□□□ 0.58
TMEM53-204ENST00000372243 SART3Q15020 963 aaKnown RBP18.67■□□□□ 0.58
TMEM53-204ENST00000372243 CCDC178Q5BJE1 867 aa18.67■□□□□ 0.58
TMEM53-204ENST00000372243 PRAMEF18Q5VWM3 479 aa18.67■□□□□ 0.58
TMEM53-204ENST00000372243 MAP1SQ66K74 1059 aaPredicted RBP18.67■□□□□ 0.58
TMEM53-204ENST00000372243 MIGA2Q7L4E1 593 aa18.67■□□□□ 0.58
TMEM53-204ENST00000372243 CDCA5Q96FF9 252 aa18.67■□□□□ 0.58
TMEM53-204ENST00000372243 ZNF341Q9BYN7 854 aa18.67■□□□□ 0.58
TMEM53-204ENST00000372243 GREB1LQ9C091 1923 aaPredicted RBP18.66■□□□□ 0.58
TMEM53-204ENST00000372243 NF2P35240 595 aa18.66■□□□□ 0.58
TMEM53-204ENST00000372243 FAM47AQ5JRC9 791 aa18.66■□□□□ 0.58
TMEM53-204ENST00000372243 ZNF112Q9UJU3 913 aa18.66■□□□□ 0.58
TMEM53-204ENST00000372243 RBM19Q9Y4C8 960 aaKnown RBP18.66■□□□□ 0.58
TMEM53-204ENST00000372243 PHF20L1A8MW92 1017 aa18.65■□□□□ 0.58
TMEM53-204ENST00000372243 AKR1B1P15121 316 aa18.65■□□□□ 0.58
TMEM53-204ENST00000372243 ANKRD1Q15327 319 aa18.65■□□□□ 0.58
TMEM53-204ENST00000372243 CHADLQ6NUI6 762 aa18.65■□□□□ 0.58
TMEM53-204ENST00000372243 CHST3Q7LGC8 479 aa18.65■□□□□ 0.58
TMEM53-204ENST00000372243 IGDCC4Q8TDY8 1250 aa18.65■□□□□ 0.58
TMEM53-204ENST00000372243 ZSCAN10Q96SZ4 725 aaPredicted RBP18.65■□□□□ 0.58
TMEM53-204ENST00000372243 UBAC1Q9BSL1 405 aa18.65■□□□□ 0.58
TMEM53-204ENST00000372243 GINM1Q9NU53 330 aa18.65■□□□□ 0.58
TMEM53-204ENST00000372243 ERICH2A1L162 156 aa18.64■□□□□ 0.58
TMEM53-204ENST00000372243 CAP2P40123 477 aa18.64■□□□□ 0.58
TMEM53-204ENST00000372243 ABCB5Q2M3G0 1257 aa18.64■□□□□ 0.58
TMEM53-204ENST00000372243 Q6ZUG5 572 aa18.64■□□□□ 0.58
TMEM53-204ENST00000372243 TMEM179Q6ZVK1 233 aa18.64■□□□□ 0.58
TMEM53-204ENST00000372243 TCEANC2Q96MN5 208 aa18.64■□□□□ 0.58
TMEM53-204ENST00000372243 IGKV6D-41A0A0C4DH26 115 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 SH2B2O14492 632 aaPredicted RBP18.64■□□□□ 0.57
TMEM53-204ENST00000372243 KIF3CO14782 793 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 IFIT3O14879 490 aaKnown RBP18.64■□□□□ 0.57
TMEM53-204ENST00000372243 PPP1R12BO60237 982 aaPredicted RBP18.64■□□□□ 0.57
TMEM53-204ENST00000372243 LIFRP42702 1097 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 NOVP48745 357 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 MCM2P49736 904 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 AK2P54819 239 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 RRP1BQ14684 758 aaKnown RBP18.64■□□□□ 0.57
TMEM53-204ENST00000372243 SEC23AQ15436 765 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 PPP4R3BQ5MIZ7 849 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 DGKHQ86XP1 1220 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 TMTC2Q8N394 836 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 SNX21Q969T3 373 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 KLRG1Q96E93 195 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.64■□□□□ 0.57
TMEM53-204ENST00000372243 CABP5Q9NP86 173 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 IL17RBQ9NRM6 502 aa18.64■□□□□ 0.57
TMEM53-204ENST00000372243 ANGEL1Q9UNK9 670 aaKnown RBP18.64■□□□□ 0.57
TMEM53-204ENST00000372243 TNKSO95271 1327 aa18.63■□□□□ 0.57
TMEM53-204ENST00000372243 CTNND1O60716 968 aaKnown RBP18.63■□□□□ 0.57
TMEM53-204ENST00000372243 FGD1P98174 961 aa18.63■□□□□ 0.57
TMEM53-204ENST00000372243 TOB2Q14106 344 aaPredicted RBP18.63■□□□□ 0.57
TMEM53-204ENST00000372243 TMEM67Q5HYA8 995 aa18.63■□□□□ 0.57
TMEM53-204ENST00000372243 DLK2Q6UY11 383 aa18.63■□□□□ 0.57
TMEM53-204ENST00000372243 ANKS1AQ92625 1134 aa18.63■□□□□ 0.57
TMEM53-204ENST00000372243 ZKSCAN3Q9BRR0 538 aa18.63■□□□□ 0.57
TMEM53-204ENST00000372243 MPHOSPH10O00566 681 aaKnown RBP18.62■□□□□ 0.57
TMEM53-204ENST00000372243 USP2O75604 605 aaPredicted RBP18.62■□□□□ 0.57
TMEM53-204ENST00000372243 ASNSP08243 561 aa18.62■□□□□ 0.57
TMEM53-204ENST00000372243 EVCP57679 992 aa18.62■□□□□ 0.57
TMEM53-204ENST00000372243 MAP3K11Q16584 847 aa18.62■□□□□ 0.57
TMEM53-204ENST00000372243 SGMS1Q86VZ5 419 aa18.62■□□□□ 0.57
TMEM53-204ENST00000372243 ENAHQ8N8S7 591 aaPredicted RBP18.62■□□□□ 0.57
TMEM53-204ENST00000372243 LRRC2Q9BYS8 371 aa18.62■□□□□ 0.57
TMEM53-204ENST00000372243 LY9Q9HBG7 655 aa18.62■□□□□ 0.57
TMEM53-204ENST00000372243 ATAD5Q96QE3 1844 aa18.61■□□□□ 0.57
TMEM53-204ENST00000372243 GDF11O95390 407 aa18.61■□□□□ 0.57
TMEM53-204ENST00000372243 ITGBL1O95965 494 aaPredicted RBP18.61■□□□□ 0.57
TMEM53-204ENST00000372243 YY1P25490 414 aa18.61■□□□□ 0.57
TMEM53-204ENST00000372243 WTAPQ15007 396 aa18.61■□□□□ 0.57
TMEM53-204ENST00000372243 RCSD1Q6JBY9 416 aa18.61■□□□□ 0.57
TMEM53-204ENST00000372243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.61■□□□□ 0.57
TMEM53-204ENST00000372243 BRF1Q92994 677 aa18.61■□□□□ 0.57
TMEM53-204ENST00000372243 CEP95Q96GE4 821 aa18.61■□□□□ 0.57
TMEM53-204ENST00000372243 KANSL2Q9H9L4 492 aa18.61■□□□□ 0.57
TMEM53-204ENST00000372243 MTMR4Q9NYA4 1195 aa18.61■□□□□ 0.57
TMEM53-204ENST00000372243 ZBTB21Q9ULJ3 1066 aa18.61■□□□□ 0.57
TMEM53-204ENST00000372243 PAPPA2Q9BXP8 1791 aa18.61■□□□□ 0.57
TMEM53-204ENST00000372243 NMT2O60551 498 aa18.6■□□□□ 0.57
TMEM53-204ENST00000372243 GH2P01242 217 aa18.6■□□□□ 0.57
TMEM53-204ENST00000372243 GUCY1A2P33402 732 aa18.6■□□□□ 0.57
TMEM53-204ENST00000372243 ANP32AP39687 249 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms