RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CAPN7Q9Y6W3 813 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 GOLGA6CA6NDK9 693 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 MBD4O95243 580 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 GOLGA6DP0CG33 693 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 GOLGA6AQ9NYA3 693 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 INSRP06213 1382 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 WDR17Q8IZU2 1322 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 PSMD6Q15008 389 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 THRAP3Q9Y2W1 955 aaKnown RBP15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 RBM8AQ9Y5S9 174 aaKnown RBP15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 FAM135BQ49AJ0 1406 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 AKR1B10O60218 316 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 EIF4A1P60842 406 aaKnown RBP15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 BRF1Q92994 677 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 TBCAO75347 108 aaKnown RBP15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 CRKLP46109 303 aaKnown RBP15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 PHEXP78562 749 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 TLDC2A0PJX2 215 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 C6orf50Q9HD87 102 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 SDSP20132 328 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 UBA7P41226 1012 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 PCYT1AP49585 367 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 JAKMIP2Q96AA8 810 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 XAGE2Q96GT9 111 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 TTC12Q9H892 705 aaPredicted RBP15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 PALMDQ9NP74 551 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 IVNS1ABPQ9Y6Y0 642 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 MAP3K4Q9Y6R4 1608 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 IDEP14735 1019 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 SNX21Q969T3 373 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 LRRC2Q9BYS8 371 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 PANK2Q9BZ23 570 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 LRRC27Q9C0I9 530 aa15.67■□□□□ 0.1
RAPGEF1-202ENST00000372190 SKOR1P84550 965 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 SNCBQ16143 134 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 CCDC186Q7Z3E2 898 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 USP19O94966 1318 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 ABCC3O15438 1527 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 TERF1P54274 439 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 LPIN2Q92539 896 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 ZSCAN16Q9H4T2 348 aaPredicted RBP15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 ATF5Q9Y2D1 282 aaPredicted RBP15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 RPS8P62241 208 aaKnown RBP15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 C8orf34Q49A92 452 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 CHL1O00533 1208 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 RHOXF2BP0C7M4 288 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 ARHGEF25Q86VW2 580 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 HAUS1Q96CS2 278 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 RHOXF2Q9BQY4 288 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 NUB1Q9Y5A7 615 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 SBNO2Q9Y2G9 1366 aa15.66■□□□□ 0.1
RAPGEF1-202ENST00000372190 KRT13P13646 458 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 NCAPGQ9BPX3 1015 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 PYM1Q9BRP8 204 aaKnown RBP15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 FRMD3A2A2Y4 597 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 GCKRQ14397 625 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 ANO6Q4KMQ2 910 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 USP48Q86UV5 1035 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 TBC1D22AQ8WUA7 517 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 LMBR1Q8WVP7 490 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 CNPY2Q9Y2B0 182 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 SERPINI2O75830 405 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 KANK3Q6NY19 840 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 CTAGE1Q96RT6 745 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 PARP1P09874 1014 aaKnown RBP15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 TIMM10P62072 90 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 TRIM60Q495X7 471 aa15.65■□□□□ 0.1
RAPGEF1-202ENST00000372190 PPM1FP49593 454 aaPredicted RBP15.64■□□□□ 0.1
RAPGEF1-202ENST00000372190 PPP2R3AQ06190 1150 aa15.64■□□□□ 0.1
RAPGEF1-202ENST00000372190 BIRC2Q13490 618 aa15.64■□□□□ 0.1
RAPGEF1-202ENST00000372190 TNNI3KQ59H18 835 aa15.64■□□□□ 0.1
RAPGEF1-202ENST00000372190 DCPSQ96C86 337 aaKnown RBP15.64■□□□□ 0.1
RAPGEF1-202ENST00000372190 FPGT-TNNI3KV9GXZ4 949 aa15.64■□□□□ 0.1
RAPGEF1-202ENST00000372190 CTSWP56202 376 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 TCP10Q12799 353 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 TNNC1P63316 161 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 KRT83P78385 493 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 NCBP1Q09161 790 aaKnown RBP15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 UBLCP1Q8WVY7 318 aaPredicted RBP15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 IFT81Q8WYA0 676 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 NPC1L1Q9UHC9 1359 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 ZRANB2O95218 330 aaKnown RBP eCLIP15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 HPDP32754 393 aaPredicted RBP15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 HSPA1LP34931 641 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 ZYXQ15942 572 aaKnown RBP15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 FAM200AQ8TCP9 573 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 BAG1Q99933 345 aaPredicted RBP15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 ALG1Q9BT22 464 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 A2ML1A8K2U0 1454 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 LONP1P36776 959 aaKnown RBP15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 UBASH3AP57075 661 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 USP37Q86T82 979 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 GIMAP4Q9NUV9 329 aa15.64■□□□□ 0.09
RAPGEF1-202ENST00000372190 GTF2IP78347 998 aa15.63■□□□□ 0.09
RAPGEF1-202ENST00000372190 Q6ZUG5 572 aa15.63■□□□□ 0.09
RAPGEF1-202ENST00000372190 CROCCP2Q86T23 111 aa15.63■□□□□ 0.09
RAPGEF1-202ENST00000372190 IWS1Q96ST2 819 aa15.63■□□□□ 0.09
RAPGEF1-202ENST00000372190 AATFQ9NY61 560 aaKnown RBP eCLIP15.63■□□□□ 0.09
RAPGEF1-202ENST00000372190 CSADQ9Y600 493 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms