RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 HERC4Q5GLZ8 1057 aaPredicted RBP16.53■□□□□ 0.24
NDC1-201ENST00000371429 ATP8A2Q9NTI2 1148 aa16.53■□□□□ 0.24
NDC1-201ENST00000371429 ARAP3Q8WWN8 1544 aa16.53■□□□□ 0.24
NDC1-201ENST00000371429 LRRC47Q8N1G4 583 aaKnown RBP16.53■□□□□ 0.24
NDC1-201ENST00000371429 CUTAO60888 179 aa16.52■□□□□ 0.24
NDC1-201ENST00000371429 MMP10P09238 476 aa16.52■□□□□ 0.24
NDC1-201ENST00000371429 HSPD1P10809 573 aaKnown RBP16.52■□□□□ 0.24
NDC1-201ENST00000371429 PREX2Q70Z35 1606 aa16.52■□□□□ 0.24
NDC1-201ENST00000371429 ABCC3O15438 1527 aa16.52■□□□□ 0.24
NDC1-201ENST00000371429 ADGRL3Q9HAR2 1447 aa16.52■□□□□ 0.24
NDC1-201ENST00000371429 POLR2DO15514 142 aaKnown RBP16.52■□□□□ 0.24
NDC1-201ENST00000371429 ADORA1P30542 326 aa16.52■□□□□ 0.24
NDC1-201ENST00000371429 MYL5Q02045 173 aa16.52■□□□□ 0.24
NDC1-201ENST00000371429 UBE3CQ15386 1083 aa16.52■□□□□ 0.24
NDC1-201ENST00000371429 FMNL3Q8IVF7 1028 aa16.52■□□□□ 0.24
NDC1-201ENST00000371429 TM6SF1Q9BZW5 370 aa16.52■□□□□ 0.24
NDC1-201ENST00000371429 MAP3K4Q9Y6R4 1608 aa16.52■□□□□ 0.24
NDC1-201ENST00000371429 TMEM110-MUSTN1A8MSY1 372 aa16.52■□□□□ 0.23
NDC1-201ENST00000371429 M0QZ92 97 aa16.52■□□□□ 0.23
NDC1-201ENST00000371429 KRT86O43790 486 aa16.52■□□□□ 0.23
NDC1-201ENST00000371429 TRPC3Q13507 836 aa16.52■□□□□ 0.23
NDC1-201ENST00000371429 CCDC93Q567U6 631 aa16.52■□□□□ 0.23
NDC1-201ENST00000371429 CETN3O15182 167 aa16.52■□□□□ 0.23
NDC1-201ENST00000371429 SLC8A3P57103 927 aa16.52■□□□□ 0.23
NDC1-201ENST00000371429 SMC1AQ14683 1233 aaKnown RBP16.52■□□□□ 0.23
NDC1-201ENST00000371429 DHX37Q8IY37 1157 aaKnown RBP16.52■□□□□ 0.23
NDC1-201ENST00000371429 TNKSO95271 1327 aa16.52■□□□□ 0.23
NDC1-201ENST00000371429 CDAN1Q8IWY9 1227 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 FLOT1O75955 427 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 CCDC175P0C221 793 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 CKAP4Q07065 602 aaKnown RBP16.51■□□□□ 0.23
NDC1-201ENST00000371429 ABCB5Q2M3G0 1257 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 IFNKQ9P0W0 207 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 KDM6BO15054 1643 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 TESPA1A2RU30 521 aaPredicted RBP16.51■□□□□ 0.23
NDC1-201ENST00000371429 FGAP02671 866 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 ANKRD35Q8N283 1001 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 SSX2IPQ9Y2D8 614 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 GAS7O60861 476 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 TSNARE1Q96NA8 513 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 CSRNP1Q96S65 589 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 NOC4LQ9BVI4 516 aaKnown RBP16.51■□□□□ 0.23
NDC1-201ENST00000371429 GPR108Q9NPR9 543 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 MAPK8IP1Q9UQF2 711 aa16.51■□□□□ 0.23
NDC1-201ENST00000371429 MRPL11Q9Y3B7 192 aaKnown RBP16.51■□□□□ 0.23
NDC1-201ENST00000371429 FRMPD2Q68DX3 1309 aaPredicted RBP16.51■□□□□ 0.23
NDC1-201ENST00000371429 KLRF2D3W0D1 207 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 KRT5P13647 590 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 STX10O60499 249 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 TBC1D8BQ0IIM8 1120 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 DALRD3Q5D0E6 543 aaKnown RBP16.5■□□□□ 0.23
NDC1-201ENST00000371429 SLFN13Q68D06 897 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 CC2D2BQ6DHV5 1058 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 CCDC117Q8IWD4 279 aaPredicted RBP16.5■□□□□ 0.23
NDC1-201ENST00000371429 PSTPIP2Q9H939 334 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 MLXIPQ9HAP2 919 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 JAK2O60674 1132 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 RAD17O75943 681 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 ARHGEF16Q5VV41 709 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
NDC1-201ENST00000371429 CCDC50Q8IVM0 306 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 MYCT1Q8N699 235 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 FANCBQ8NB91 859 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 CCDC17Q96LX7 622 aa16.5■□□□□ 0.23
NDC1-201ENST00000371429 DBNLQ9UJU6 430 aaKnown RBP16.5■□□□□ 0.23
NDC1-201ENST00000371429 MAATS1Q7Z4T9 603 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 CTNND2Q9UQB3 1225 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 CALUO43852 315 aaPredicted RBP16.49■□□□□ 0.23
NDC1-201ENST00000371429 DYMQ7RTS9 669 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 PLCD3Q8N3E9 789 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 DDX12PQ92771 950 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 DNAI1Q9UI46 699 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 RPS6KA4O75676 772 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 RAD51AP2Q09MP3 1159 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 FAM47CQ5HY64 1035 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 FBXO11Q86XK2 927 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 PNMA2Q9UL42 364 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 CYP27B1O15528 508 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 SUPT20HL1Q3ZLR7 823 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 CSGALNACT2Q8N6G5 542 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 TTLL6Q8N841 843 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 BBXQ8WY36 941 aaPredicted RBP16.49■□□□□ 0.23
NDC1-201ENST00000371429 ATP6V0A2Q9Y487 856 aa16.49■□□□□ 0.23
NDC1-201ENST00000371429 TMEM232C9JQI7 657 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 DTNBO60941 627 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 GOLGA8HP0CJ92 632 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 NPR1P16066 1061 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 TPH2Q8IWU9 490 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 ZNF830Q96NB3 372 aaPredicted RBP16.48■□□□□ 0.23
NDC1-201ENST00000371429 ARHGAP31Q2M1Z3 1444 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 MCTP2Q6DN12 878 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 CABP7Q86V35 215 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 NCAPG2Q86XI2 1143 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 CMTR1Q8N1G2 835 aaKnown RBP16.48■□□□□ 0.23
NDC1-201ENST00000371429 POLR2MP0CAP2 368 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 PTH1RQ03431 593 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 GSTA5Q7RTV2 222 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 KIFAP3Q92845 792 aa16.48■□□□□ 0.23
NDC1-201ENST00000371429 ZNF274Q96GC6 653 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms