RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 CCNT1O60563 726 aaKnown RBP19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 PPFIA4O75335 1185 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 RFC4P35249 363 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 PCK1P35558 622 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 TXKP42681 527 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 MTMR3Q13615 1198 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 RPS6KA1Q15418 735 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 STX10O60499 249 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 LDHBP07195 334 aaKnown RBP19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 ZAP70P43403 619 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 MRPL12P52815 198 aaKnown RBP19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 ADCK5Q3MIX3 580 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 TRIML1Q8N9V2 468 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 DENND2AQ9ULE3 1009 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 IL2RBP14784 551 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 DAAM2Q86T65 1068 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 FCHSD1Q86WN1 690 aa19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 ZNF219Q9P2Y4 722 aaPredicted RBP19.09■□□□□ 0.65
PTP4A1-201ENST00000370651 ATP8B1O43520 1251 aa19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 GPIHBP1Q8IV16 184 aa19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 NOSTRINQ8IVI9 506 aa19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 TRIM58Q8NG06 486 aa19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 IQCDQ96DY2 449 aa19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 A0A1W2PQ27 194 aa19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 A0A1W2PQ64 194 aa19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 A0A1W2PQD8 194 aa19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 KLHL30Q0D2K2 578 aa19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 SF3B2Q13435 895 aaKnown RBP19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 TYW1BQ6NUM6 668 aa19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 LMNTD2Q8IXW0 634 aa19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 FAM71BQ8TC56 605 aa19.08■□□□□ 0.65
PTP4A1-201ENST00000370651 PPARDQ03181 441 aa19.08■□□□□ 0.64
PTP4A1-201ENST00000370651 KRT71Q3SY84 523 aa19.08■□□□□ 0.64
PTP4A1-201ENST00000370651 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.08■□□□□ 0.64
PTP4A1-201ENST00000370651 KDM5AP29375 1690 aaKnown RBP19.08■□□□□ 0.64
PTP4A1-201ENST00000370651 MAP2K2P36507 400 aa19.08■□□□□ 0.64
PTP4A1-201ENST00000370651 UNC5CLQ8IV45 518 aa19.08■□□□□ 0.64
PTP4A1-201ENST00000370651 PLS1Q14651 629 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 ZNF827Q17R98 1081 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 NBPF14Q5TI25 921 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 MAP4K1Q92918 833 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 HAUS4Q9H6D7 363 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 FAM207AQ9NSI2 230 aaPredicted RBP19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 VPS54Q9P1Q0 977 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 WDR78Q5VTH9 848 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 TAOK1Q7L7X3 1001 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 UBL4BQ8N7F7 174 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 PDE11AQ9HCR9 933 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 LRWD1Q9UFC0 647 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 KCNJ18B7U540 433 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 KCNJ12Q14500 433 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 ZNF532Q9HCE3 1301 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 C2CD5Q86YS7 1000 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 CAPN7Q9Y6W3 813 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 ARHGEF10O15013 1369 aa19.07■□□□□ 0.64
PTP4A1-201ENST00000370651 PLXNC1O60486 1568 aa19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 RRAGAQ7L523 313 aa19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 BCAS4Q8TDM0 211 aa19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 NONOQ15233 471 aaKnown RBP eCLIP19.06■□□□□ 0.641e-6■■■■□ 20.7
PTP4A1-201ENST00000370651 SFMBT2Q5VUG0 894 aa19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 VSIG1Q86XK7 387 aa19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 NUCKS1Q9H1E3 243 aaKnown RBP19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 COMMD10Q9Y6G5 202 aa19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 KDM5CP41229 1560 aa19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 WDR7Q9Y4E6 1490 aa19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 FLOT1O75955 427 aa19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 TCHPQ9BT92 498 aa19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 CSRNP2Q9H175 543 aa19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 HDAC9Q9UKV0 1011 aa19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 PPANQ9NQ55 473 aaKnown RBP19.06■□□□□ 0.64
PTP4A1-201ENST00000370651 GOLGA8KD6RF30 607 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 ERCC3P19447 782 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 CEP128Q6ZU80 1094 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 RTEL1Q9NZ71 1219 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 CDC23Q9UJX2 597 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 NEURL1BA8MQ27 555 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 ST5P78524 1137 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 KRT25Q7Z3Z0 450 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 CABLES1Q8TDN4 633 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 SNX29Q8TEQ0 813 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 CAPS2Q9BXY5 557 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 ANKRD2Q9GZV1 360 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 ADAMTS12P58397 1594 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 HSPD1P10809 573 aaKnown RBP19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 ADD1P35611 737 aaKnown RBP19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 SCRN1Q12765 414 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 AKNAD1Q5T1N1 836 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 ZNF365Q70YC5 407 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 DYMQ7RTS9 669 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 PEX26Q7Z412 305 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 SRGAP1Q7Z6B7 1085 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 CACNA2D3Q8IZS8 1091 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 hCG_1642624A0A1W2PR95 340 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 MORC3Q14149 939 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 HERC4Q5GLZ8 1057 aaPredicted RBP19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 BAIAP2L1Q9UHR4 511 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 JAG2Q9Y219 1238 aa19.05■□□□□ 0.64
PTP4A1-201ENST00000370651 HYOU1Q9Y4L1 999 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms